RNA–Protein interactions for RNA: ENST00000560300.1

RORA-213, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-213ENST00000560300 IL17REQ8NFR9 667 aa23.27■■□□□ 1.32
RORA-213ENST00000560300 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
RORA-213ENST00000560300 ARHGAP27Q6ZUM4 889 aa23.26■■□□□ 1.31
RORA-213ENST00000560300 GAS2L2Q8NHY3 880 aa23.26■■□□□ 1.31
RORA-213ENST00000560300 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
RORA-213ENST00000560300 GNAT3A8MTJ3 354 aa23.25■■□□□ 1.31
RORA-213ENST00000560300 PIM2Q9P1W9 311 aa23.25■■□□□ 1.31
RORA-213ENST00000560300 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
RORA-213ENST00000560300 TTC5Q8N0Z6 440 aa23.24■■□□□ 1.31
RORA-213ENST00000560300 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
RORA-213ENST00000560300 KIF3CO14782 793 aa23.23■■□□□ 1.31
RORA-213ENST00000560300 CANXP27824 592 aaKnown RBP23.23■■□□□ 1.31
RORA-213ENST00000560300 CHRNA5P30532 468 aa23.23■■□□□ 1.31
RORA-213ENST00000560300 TEFQ10587 303 aa23.23■■□□□ 1.31
RORA-213ENST00000560300 NFIXQ14938 502 aa23.23■■□□□ 1.31
RORA-213ENST00000560300 ZNF496Q96IT1 587 aaPredicted RBP23.23■■□□□ 1.31
RORA-213ENST00000560300 CEP350Q5VT06 3117 aa23.22■■□□□ 1.31
RORA-213ENST00000560300 DALRD3Q5D0E6 543 aaKnown RBP23.22■■□□□ 1.31
RORA-213ENST00000560300 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
RORA-213ENST00000560300 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
RORA-213ENST00000560300 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
RORA-213ENST00000560300 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
RORA-213ENST00000560300 CFAP53Q96M91 514 aa23.21■■□□□ 1.31
RORA-213ENST00000560300 CEMIPQ8WUJ3 1361 aa23.21■■□□□ 1.31
RORA-213ENST00000560300 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
RORA-213ENST00000560300 STARD3NLO95772 234 aa23.2■■□□□ 1.3
RORA-213ENST00000560300 EIF5P55010 431 aaKnown RBP23.2■■□□□ 1.3
RORA-213ENST00000560300 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
RORA-213ENST00000560300 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
RORA-213ENST00000560300 PPP2R1AP30153 589 aa23.18■■□□□ 1.3
RORA-213ENST00000560300 HSPA6P17066 643 aa23.17■■□□□ 1.3
RORA-213ENST00000560300 C9orf131Q5VYM1 1079 aa23.17■■□□□ 1.3
RORA-213ENST00000560300 SERPINB2P05120 415 aa23.16■■□□□ 1.3
RORA-213ENST00000560300 SBF1O95248 1867 aa23.15■■□□□ 1.3
RORA-213ENST00000560300 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
RORA-213ENST00000560300 KCNQ3O43525 872 aa23.15■■□□□ 1.3
RORA-213ENST00000560300 FMNL2Q96PY5 1086 aa23.15■■□□□ 1.3
RORA-213ENST00000560300 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
RORA-213ENST00000560300 NUDCQ9Y266 331 aa23.15■■□□□ 1.3
RORA-213ENST00000560300 A0A087WZG4 1122 aa23.14■■□□□ 1.29
RORA-213ENST00000560300 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.29
RORA-213ENST00000560300 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.29
RORA-213ENST00000560300 NMRK2Q9NPI5 230 aa23.14■■□□□ 1.29
RORA-213ENST00000560300 BTBD11A6QL63 1104 aa23.13■■□□□ 1.29
RORA-213ENST00000560300 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
RORA-213ENST00000560300 A1BGP04217 495 aa23.12■■□□□ 1.29
RORA-213ENST00000560300 IL6STP40189 918 aaPredicted RBP23.12■■□□□ 1.29
RORA-213ENST00000560300 TBC1D9BQ66K14 1250 aa23.12■■□□□ 1.29
RORA-213ENST00000560300 ANKRD31Q8N7Z5 1873 aa23.12■■□□□ 1.29
RORA-213ENST00000560300 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
RORA-213ENST00000560300 RNF181Q9P0P0 153 aa23.11■■□□□ 1.29
RORA-213ENST00000560300 TBC1D2BQ9UPU7 963 aa23.11■■□□□ 1.29
RORA-213ENST00000560300 BCORQ6W2J9 1755 aa23.09■■□□□ 1.29
RORA-213ENST00000560300 TOMM70O94826 608 aa23.09■■□□□ 1.29
RORA-213ENST00000560300 MCM10Q7L590 875 aa23.09■■□□□ 1.29
RORA-213ENST00000560300 C2CD5Q86YS7 1000 aa23.09■■□□□ 1.29
RORA-213ENST00000560300 RASSF7Q02833 373 aa23.08■■□□□ 1.29
RORA-213ENST00000560300 COL11A2P13942 1736 aaPredicted RBP23.08■■□□□ 1.28
RORA-213ENST00000560300 RTF1Q92541 710 aaKnown RBP23.07■■□□□ 1.28
RORA-213ENST00000560300 USP16Q9Y5T5 823 aa23.07■■□□□ 1.28
RORA-213ENST00000560300 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
RORA-213ENST00000560300 H0YIN7 160 aa23.06■■□□□ 1.28
RORA-213ENST00000560300 CAMTA2O94983 1202 aa23.06■■□□□ 1.28
RORA-213ENST00000560300 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
RORA-213ENST00000560300 TTLL6Q8N841 843 aa23.06■■□□□ 1.28
RORA-213ENST00000560300 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
RORA-213ENST00000560300 PRR5LQ6MZQ0 368 aa23.05■■□□□ 1.28
RORA-213ENST00000560300 CCDC24Q8N4L8 307 aa23.05■■□□□ 1.28
RORA-213ENST00000560300 TNRC6CQ9HCJ0 1690 aaKnown RBP23.04■■□□□ 1.28
RORA-213ENST00000560300 PRELPP51888 382 aa23.04■■□□□ 1.28
RORA-213ENST00000560300 KDM2BQ8NHM5 1336 aa23.04■■□□□ 1.28
RORA-213ENST00000560300 CCDC88AQ3V6T2 1871 aa23.03■■□□□ 1.28
RORA-213ENST00000560300 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
RORA-213ENST00000560300 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
RORA-213ENST00000560300 BRIP1Q9BX63 1249 aa23.03■■□□□ 1.28
RORA-213ENST00000560300 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
RORA-213ENST00000560300 HTATSF1O43719 755 aaKnown RBP23.02■■□□□ 1.28
RORA-213ENST00000560300 SNRPA1P09661 255 aaKnown RBP23.02■■□□□ 1.28
RORA-213ENST00000560300 TIAM2Q8IVF5 1701 aa23.02■■□□□ 1.28
RORA-213ENST00000560300 NFKBIEO00221 500 aa23.01■■□□□ 1.27
RORA-213ENST00000560300 RBM46Q8TBY0 533 aaKnown RBP23.01■■□□□ 1.27
RORA-213ENST00000560300 SETDB2Q96T68 719 aa23.01■■□□□ 1.27
RORA-213ENST00000560300 ZC3H4Q9UPT8 1303 aaKnown RBP23.01■■□□□ 1.27
RORA-213ENST00000560300 LMNB1P20700 586 aa23■■□□□ 1.27
RORA-213ENST00000560300 PDE6BP35913 854 aa23■■□□□ 1.27
RORA-213ENST00000560300 APLP1P51693 650 aa23■■□□□ 1.27
RORA-213ENST00000560300 CNBD1Q8NA66 436 aa23■■□□□ 1.27
RORA-213ENST00000560300 ZNF622Q969S3 477 aaKnown RBP eCLIP23■■□□□ 1.27
RORA-213ENST00000560300 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
RORA-213ENST00000560300 C16orf71Q8IYS4 520 aaPredicted RBP22.99■■□□□ 1.27
RORA-213ENST00000560300 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
RORA-213ENST00000560300 LAMB4A4D0S4 1761 aa22.99■■□□□ 1.27
RORA-213ENST00000560300 NBPF26B4DH59 902 aa22.98■■□□□ 1.27
RORA-213ENST00000560300 NBPF10Q6P3W6 841 aaKnown RBP22.98■■□□□ 1.27
RORA-213ENST00000560300 NBPF15Q8N660 670 aa22.98■■□□□ 1.27
RORA-213ENST00000560300 KDM3BQ7LBC6 1761 aa22.98■■□□□ 1.27
RORA-213ENST00000560300 CACNA1SQ13698 1873 aa22.98■■□□□ 1.27
RORA-213ENST00000560300 FER1L6Q2WGJ9 1857 aa22.98■■□□□ 1.27
RORA-213ENST00000560300 TAF7Q15545 349 aaPredicted RBP22.97■■□□□ 1.27
RORA-213ENST00000560300 MIS18AQ9NYP9 233 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms