RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 NEFMP07197 916 aa19.63■□□□□ 0.73
RPL28-208ENST00000559463 MMP10P09238 476 aa19.63■□□□□ 0.73
RPL28-208ENST00000559463 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
RPL28-208ENST00000559463 SRP68Q9UHB9 627 aaKnown RBP19.63■□□□□ 0.73
RPL28-208ENST00000559463 BCORQ6W2J9 1755 aa19.62■□□□□ 0.73
RPL28-208ENST00000559463 COL15A1P39059 1388 aa19.62■□□□□ 0.73
RPL28-208ENST00000559463 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
RPL28-208ENST00000559463 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
RPL28-208ENST00000559463 CD2APQ9Y5K6 639 aa19.62■□□□□ 0.73
RPL28-208ENST00000559463 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
RPL28-208ENST00000559463 PNNQ9H307 717 aaKnown RBP19.61■□□□□ 0.73
RPL28-208ENST00000559463 NRXN2Q9P2S2 1712 aa19.6■□□□□ 0.73
RPL28-208ENST00000559463 STARD3NLO95772 234 aa19.59■□□□□ 0.73
RPL28-208ENST00000559463 FKBP8Q14318 412 aa19.59■□□□□ 0.73
RPL28-208ENST00000559463 THUMPD2Q9BTF0 503 aaKnown RBP19.59■□□□□ 0.73
RPL28-208ENST00000559463 C10orf71Q711Q0 1435 aa19.59■□□□□ 0.73
RPL28-208ENST00000559463 CANXP27824 592 aaKnown RBP19.58■□□□□ 0.72
RPL28-208ENST00000559463 PRAMEF22A3QJZ6 481 aa19.57■□□□□ 0.72
RPL28-208ENST00000559463 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
RPL28-208ENST00000559463 EIF5P55010 431 aaKnown RBP19.57■□□□□ 0.72
RPL28-208ENST00000559463 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
RPL28-208ENST00000559463 CCDC146Q8IYE0 955 aa19.57■□□□□ 0.72
RPL28-208ENST00000559463 TEX13AQ9BXU3 409 aaPredicted RBP19.57■□□□□ 0.72
RPL28-208ENST00000559463 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
RPL28-208ENST00000559463 GPR162Q16538 588 aa19.56■□□□□ 0.72
RPL28-208ENST00000559463 USPL1Q5W0Q7 1092 aa19.56■□□□□ 0.72
RPL28-208ENST00000559463 NARFQ9UHQ1 456 aa19.56■□□□□ 0.72
RPL28-208ENST00000559463 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
RPL28-208ENST00000559463 ZPR1O75312 459 aa19.55■□□□□ 0.72
RPL28-208ENST00000559463 A1BGP04217 495 aa19.55■□□□□ 0.72
RPL28-208ENST00000559463 YBX3P16989 372 aaKnown RBP eCLIP19.55■□□□□ 0.727e-8■□□□□ 8.2
RPL28-208ENST00000559463 DDR1Q08345 913 aa19.55■□□□□ 0.72
RPL28-208ENST00000559463 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.72
RPL28-208ENST00000559463 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
RPL28-208ENST00000559463 BCL2L12Q9HB09 334 aa19.55■□□□□ 0.72
RPL28-208ENST00000559463 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
RPL28-208ENST00000559463 YY1P25490 414 aa19.54■□□□□ 0.72
RPL28-208ENST00000559463 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
RPL28-208ENST00000559463 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
RPL28-208ENST00000559463 PARP3Q9Y6F1 533 aa19.54■□□□□ 0.72
RPL28-208ENST00000559463 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
RPL28-208ENST00000559463 DLEC1Q9Y238 1755 aa19.53■□□□□ 0.72
RPL28-208ENST00000559463 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
RPL28-208ENST00000559463 RIPK4P57078 832 aa19.53■□□□□ 0.72
RPL28-208ENST00000559463 ANKRD31Q8N7Z5 1873 aa19.52■□□□□ 0.72
RPL28-208ENST00000559463 TM4SF1P30408 202 aa19.52■□□□□ 0.72
RPL28-208ENST00000559463 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
RPL28-208ENST00000559463 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
RPL28-208ENST00000559463 POLRMTO00411 1230 aaKnown RBP19.51■□□□□ 0.71
RPL28-208ENST00000559463 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
RPL28-208ENST00000559463 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
RPL28-208ENST00000559463 RUNDC1Q96C34 613 aa19.51■□□□□ 0.71
RPL28-208ENST00000559463 A0A087WZG4 1122 aa19.5■□□□□ 0.71
RPL28-208ENST00000559463 ZNF330Q9Y3S2 320 aaPredicted RBP19.5■□□□□ 0.71
RPL28-208ENST00000559463 NUP98P52948 1817 aa19.5■□□□□ 0.71
RPL28-208ENST00000559463 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
RPL28-208ENST00000559463 NFIXQ14938 502 aa19.49■□□□□ 0.71
RPL28-208ENST00000559463 WWC3Q9ULE0 1092 aa19.49■□□□□ 0.71
RPL28-208ENST00000559463 LMOD3Q0VAK6 560 aa19.48■□□□□ 0.71
RPL28-208ENST00000559463 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
RPL28-208ENST00000559463 CCDC184Q52MB2 194 aa19.48■□□□□ 0.71
RPL28-208ENST00000559463 TBC1D2BQ9UPU7 963 aa19.48■□□□□ 0.71
RPL28-208ENST00000559463 NBPF26B4DH59 902 aa19.47■□□□□ 0.71
RPL28-208ENST00000559463 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
RPL28-208ENST00000559463 NBPF10Q6P3W6 841 aaKnown RBP19.47■□□□□ 0.71
RPL28-208ENST00000559463 NBPF15Q8N660 670 aa19.47■□□□□ 0.71
RPL28-208ENST00000559463 TRIM35Q9UPQ4 493 aa19.47■□□□□ 0.71
RPL28-208ENST00000559463 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
RPL28-208ENST00000559463 CAMTA2O94983 1202 aa19.46■□□□□ 0.71
RPL28-208ENST00000559463 TGFB2P61812 414 aa19.46■□□□□ 0.71
RPL28-208ENST00000559463 TSPYL4Q9UJ04 414 aa19.46■□□□□ 0.71
RPL28-208ENST00000559463 A0A0G2JLW4 131 aa19.45■□□□□ 0.7
RPL28-208ENST00000559463 GRIN3BO60391 1043 aa19.45■□□□□ 0.7
RPL28-208ENST00000559463 DPEP1P16444 411 aa19.45■□□□□ 0.7
RPL28-208ENST00000559463 TBC1D9BQ66K14 1250 aa19.45■□□□□ 0.7
RPL28-208ENST00000559463 CACNA1SQ13698 1873 aa19.45■□□□□ 0.7
RPL28-208ENST00000559463 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
RPL28-208ENST00000559463 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
RPL28-208ENST00000559463 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
RPL28-208ENST00000559463 BABAM1Q9NWV8 329 aa19.43■□□□□ 0.7
RPL28-208ENST00000559463 SERPINB2P05120 415 aa19.42■□□□□ 0.7
RPL28-208ENST00000559463 KCNA3P22001 575 aa19.42■□□□□ 0.7
RPL28-208ENST00000559463 NPM2Q86SE8 214 aaKnown RBP19.42■□□□□ 0.7
RPL28-208ENST00000559463 SBF1O95248 1867 aa19.41■□□□□ 0.7
RPL28-208ENST00000559463 APAF1O14727 1248 aa19.4■□□□□ 0.7
RPL28-208ENST00000559463 ANKRD36CQ5JPF3 1778 aa19.39■□□□□ 0.7
RPL28-208ENST00000559463 ARFGEF2Q9Y6D5 1785 aa19.39■□□□□ 0.7
RPL28-208ENST00000559463 CHL1O00533 1208 aa19.39■□□□□ 0.69
RPL28-208ENST00000559463 ANP32CO43423 234 aa19.39■□□□□ 0.69
RPL28-208ENST00000559463 CHRNA5P30532 468 aa19.39■□□□□ 0.69
RPL28-208ENST00000559463 CCDC88AQ3V6T2 1871 aa19.38■□□□□ 0.69
RPL28-208ENST00000559463 ZNF784Q8NCA9 323 aaPredicted RBP19.38■□□□□ 0.69
RPL28-208ENST00000559463 BCS1LQ9Y276 419 aa19.38■□□□□ 0.69
RPL28-208ENST00000559463 CLEC4GQ6UXB4 293 aa19.37■□□□□ 0.69
RPL28-208ENST00000559463 LAS1LQ9Y4W2 734 aaKnown RBP19.37■□□□□ 0.69
RPL28-208ENST00000559463 ERBB4Q15303 1308 aa19.36■□□□□ 0.69
RPL28-208ENST00000559463 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
RPL28-208ENST00000559463 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
RPL28-208ENST00000559463 SETDB2Q96T68 719 aa19.36■□□□□ 0.69
RPL28-208ENST00000559463 PIM2Q9P1W9 311 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms