RNA–Protein interactions for RNA: ENST00000559300.5

SEMA4B-210, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-210ENST00000559300 TUBGCP6Q96RT7 1819 aa23.77■■□□□ 1.4
SEMA4B-210ENST00000559300 EIF4A1P60842 406 aaKnown RBP23.76■■□□□ 1.39
SEMA4B-210ENST00000559300 UBR3Q6ZT12 1888 aa23.75■■□□□ 1.39
SEMA4B-210ENST00000559300 CHL1O00533 1208 aa23.75■■□□□ 1.39
SEMA4B-210ENST00000559300 CCDC27Q2M243 656 aa23.75■■□□□ 1.39
SEMA4B-210ENST00000559300 ARHGEF1Q92888 912 aaKnown RBP23.75■■□□□ 1.39
SEMA4B-210ENST00000559300 TSPYL4Q9UJ04 414 aa23.75■■□□□ 1.39
SEMA4B-210ENST00000559300 CALD1Q05682 793 aaKnown RBP23.74■■□□□ 1.39
SEMA4B-210ENST00000559300 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
SEMA4B-210ENST00000559300 SOS1Q07889 1333 aaPredicted RBP23.74■■□□□ 1.39
SEMA4B-210ENST00000559300 FAM9BQ8IZU0 186 aa23.73■■□□□ 1.39
SEMA4B-210ENST00000559300 GIGYF1O75420 1035 aaPredicted RBP23.72■■□□□ 1.39
SEMA4B-210ENST00000559300 CFAP44Q96MT7 982 aa23.72■■□□□ 1.39
SEMA4B-210ENST00000559300 USP16Q9Y5T5 823 aa23.72■■□□□ 1.39
SEMA4B-210ENST00000559300 MYH14Q7Z406 1995 aaKnown RBP23.72■■□□□ 1.39
SEMA4B-210ENST00000559300 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
SEMA4B-210ENST00000559300 RFC4P35249 363 aa23.71■■□□□ 1.39
SEMA4B-210ENST00000559300 ZNF853P0CG23 659 aa23.7■■□□□ 1.38
SEMA4B-210ENST00000559300 POLD1P28340 1107 aa23.7■■□□□ 1.38
SEMA4B-210ENST00000559300 EIF5P55010 431 aaKnown RBP23.7■■□□□ 1.38
SEMA4B-210ENST00000559300 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.38
SEMA4B-210ENST00000559300 IL6STP40189 918 aaPredicted RBP23.69■■□□□ 1.38
SEMA4B-210ENST00000559300 IFT57Q9NWB7 429 aa23.69■■□□□ 1.38
SEMA4B-210ENST00000559300 A1BGP04217 495 aa23.68■■□□□ 1.38
SEMA4B-210ENST00000559300 CANXP27824 592 aaKnown RBP23.68■■□□□ 1.38
SEMA4B-210ENST00000559300 WWC1Q8IX03 1113 aa23.68■■□□□ 1.38
SEMA4B-210ENST00000559300 NGEFQ8N5V2 710 aa23.68■■□□□ 1.38
SEMA4B-210ENST00000559300 PPP1R1BQ9UD71 204 aaPredicted RBP23.68■■□□□ 1.38
SEMA4B-210ENST00000559300 COL24A1Q17RW2 1714 aa23.67■■□□□ 1.38
SEMA4B-210ENST00000559300 USP42Q9H9J4 1324 aaKnown RBP23.67■■□□□ 1.38
SEMA4B-210ENST00000559300 GNAI1P63096 354 aa23.67■■□□□ 1.38
SEMA4B-210ENST00000559300 MSL1Q68DK7 614 aa23.67■■□□□ 1.38
SEMA4B-210ENST00000559300 NLGN1Q8N2Q7 840 aa23.67■■□□□ 1.38
SEMA4B-210ENST00000559300 ARXQ96QS3 562 aa23.67■■□□□ 1.38
SEMA4B-210ENST00000559300 COL15A1P39059 1388 aa23.66■■□□□ 1.38
SEMA4B-210ENST00000559300 A0A087WZG4 1122 aa23.66■■□□□ 1.38
SEMA4B-210ENST00000559300 GYS1P13807 737 aa23.66■■□□□ 1.38
SEMA4B-210ENST00000559300 NARFQ9UHQ1 456 aa23.65■■□□□ 1.38
SEMA4B-210ENST00000559300 LAS1LQ9Y4W2 734 aaKnown RBP23.65■■□□□ 1.38
SEMA4B-210ENST00000559300 MBIPQ9NS73 344 aa23.64■■□□□ 1.37
SEMA4B-210ENST00000559300 IL16Q14005 1332 aa23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 NBPF26B4DH59 902 aa23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 ZPR1O75312 459 aa23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 NBPF10Q6P3W6 841 aaKnown RBP23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 MIER1Q8N108 512 aa23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 NBPF15Q8N660 670 aa23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 SRP68Q9UHB9 627 aaKnown RBP23.63■■□□□ 1.37
SEMA4B-210ENST00000559300 ERBB4Q15303 1308 aa23.61■■□□□ 1.37
SEMA4B-210ENST00000559300 HOXB7P09629 217 aa23.61■■□□□ 1.37
SEMA4B-210ENST00000559300 WDR63Q8IWG1 891 aa23.61■■□□□ 1.37
SEMA4B-210ENST00000559300 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
SEMA4B-210ENST00000559300 USPL1Q5W0Q7 1092 aa23.6■■□□□ 1.37
SEMA4B-210ENST00000559300 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
SEMA4B-210ENST00000559300 MMP10P09238 476 aa23.59■■□□□ 1.37
SEMA4B-210ENST00000559300 FKBP8Q14318 412 aa23.59■■□□□ 1.37
SEMA4B-210ENST00000559300 FHDC1Q9C0D6 1143 aaPredicted RBP23.59■■□□□ 1.37
SEMA4B-210ENST00000559300 PIP4K2AP48426 406 aaPredicted RBP23.58■■□□□ 1.37
SEMA4B-210ENST00000559300 BCL2L12Q9HB09 334 aa23.58■■□□□ 1.37
SEMA4B-210ENST00000559300 C4AP0C0L4 1744 aa23.58■■□□□ 1.37
SEMA4B-210ENST00000559300 KRT24Q2M2I5 525 aa23.57■■□□□ 1.36
SEMA4B-210ENST00000559300 SYT17Q9BSW7 474 aa23.57■■□□□ 1.36
SEMA4B-210ENST00000559300 TBC1D2BQ9UPU7 963 aa23.57■■□□□ 1.36
SEMA4B-210ENST00000559300 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
SEMA4B-210ENST00000559300 RGL2O15211 777 aa23.56■■□□□ 1.36
SEMA4B-210ENST00000559300 TM4SF1P30408 202 aa23.56■■□□□ 1.36
SEMA4B-210ENST00000559300 SALL2Q9Y467 1007 aaPredicted RBP23.56■■□□□ 1.36
SEMA4B-210ENST00000559300 LAMB4A4D0S4 1761 aa23.55■■□□□ 1.36
SEMA4B-210ENST00000559300 CAMTA2O94983 1202 aa23.55■■□□□ 1.36
SEMA4B-210ENST00000559300 EIF2S2P20042 333 aaKnown RBP23.55■■□□□ 1.36
SEMA4B-210ENST00000559300 PDIA6Q15084 440 aa23.55■■□□□ 1.36
SEMA4B-210ENST00000559300 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
SEMA4B-210ENST00000559300 DZIP3Q86Y13 1208 aaKnown RBP23.55■■□□□ 1.36
SEMA4B-210ENST00000559300 CD2APQ9Y5K6 639 aa23.54■■□□□ 1.36
SEMA4B-210ENST00000559300 ZNF521Q96K83 1311 aa23.54■■□□□ 1.36
SEMA4B-210ENST00000559300 LRP10Q7Z4F1 713 aa23.53■■□□□ 1.36
SEMA4B-210ENST00000559300 DDR1Q08345 913 aa23.52■■□□□ 1.36
SEMA4B-210ENST00000559300 NFIXQ14938 502 aa23.52■■□□□ 1.36
SEMA4B-210ENST00000559300 CLEC4GQ6UXB4 293 aa23.52■■□□□ 1.36
SEMA4B-210ENST00000559300 PARP3Q9Y6F1 533 aa23.52■■□□□ 1.36
SEMA4B-210ENST00000559300 HDGFL1Q5TGJ6 251 aa23.51■■□□□ 1.35
SEMA4B-210ENST00000559300 C8orf58Q8NAV2 365 aa23.51■■□□□ 1.35
SEMA4B-210ENST00000559300 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
SEMA4B-210ENST00000559300 POLRMTO00411 1230 aaKnown RBP23.5■■□□□ 1.35
SEMA4B-210ENST00000559300 MYL6BP14649 208 aa23.5■■□□□ 1.35
SEMA4B-210ENST00000559300 CHMP4AQ9BY43 222 aa23.5■■□□□ 1.35
SEMA4B-210ENST00000559300 DDX21Q9NR30 783 aaKnown RBP eCLIP23.5■■□□□ 1.35
SEMA4B-210ENST00000559300 ERVV-1B6SEH8 477 aa23.49■■□□□ 1.35
SEMA4B-210ENST00000559300 PROSER3Q2NL68 480 aa23.48■■□□□ 1.35
SEMA4B-210ENST00000559300 DBF4Q9UBU7 674 aaPredicted RBP23.48■■□□□ 1.35
SEMA4B-210ENST00000559300 ZNF652Q9Y2D9 606 aa23.48■■□□□ 1.35
SEMA4B-210ENST00000559300 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
SEMA4B-210ENST00000559300 TBC1D9BQ66K14 1250 aa23.47■■□□□ 1.35
SEMA4B-210ENST00000559300 TTLL7Q6ZT98 887 aa23.47■■□□□ 1.35
SEMA4B-210ENST00000559300 KLHL34Q8N239 644 aa23.47■■□□□ 1.35
SEMA4B-210ENST00000559300 NECTIN2Q92692 538 aa23.47■■□□□ 1.35
SEMA4B-210ENST00000559300 MYH16Q9H6N6 1097 aa23.47■■□□□ 1.35
SEMA4B-210ENST00000559300 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
SEMA4B-210ENST00000559300 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
SEMA4B-210ENST00000559300 SCN7AQ01118 1682 aa23.46■■□□□ 1.35
SEMA4B-210ENST00000559300 GOLGA2Q08379 1002 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms