RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 SMC4Q9NTJ3 1288 aa20.71■□□□□ 0.91
PBX1-215ENST00000559240 TMOD3Q9NYL9 352 aa20.7■□□□□ 0.9
PBX1-215ENST00000559240 CCDC30Q5VVM6 783 aa20.7■□□□□ 0.9
PBX1-215ENST00000559240 PAXIP1Q6ZW49 1069 aaPredicted RBP20.7■□□□□ 0.9
PBX1-215ENST00000559240 RRAGDQ9NQL2 400 aaPredicted RBP20.7■□□□□ 0.9
PBX1-215ENST00000559240 KCNQ3O43525 872 aa20.69■□□□□ 0.9
PBX1-215ENST00000559240 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
PBX1-215ENST00000559240 FMNL2Q96PY5 1086 aa20.69■□□□□ 0.9
PBX1-215ENST00000559240 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
PBX1-215ENST00000559240 IPO8O15397 1037 aaKnown RBP20.68■□□□□ 0.9
PBX1-215ENST00000559240 RBM6P78332 1123 aaKnown RBP20.68■□□□□ 0.9
PBX1-215ENST00000559240 TTC5Q8N0Z6 440 aa20.68■□□□□ 0.9
PBX1-215ENST00000559240 TAF7LQ5H9L4 462 aa20.68■□□□□ 0.9
PBX1-215ENST00000559240 PTPRCP08575 1304 aa20.67■□□□□ 0.9
PBX1-215ENST00000559240 ZKSCAN2Q63HK3 967 aa20.67■□□□□ 0.9
PBX1-215ENST00000559240 PIGBQ92521 554 aa20.67■□□□□ 0.9
PBX1-215ENST00000559240 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
PBX1-215ENST00000559240 TJP1Q07157 1748 aa20.66■□□□□ 0.9
PBX1-215ENST00000559240 RREB1Q92766 1687 aa20.66■□□□□ 0.9
PBX1-215ENST00000559240 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
PBX1-215ENST00000559240 SEPT12Q8IYM1 358 aa20.65■□□□□ 0.9
PBX1-215ENST00000559240 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
PBX1-215ENST00000559240 ELL2O00472 640 aaPredicted RBP20.64■□□□□ 0.9
PBX1-215ENST00000559240 ATF7IPQ6VMQ6 1270 aa20.64■□□□□ 0.9
PBX1-215ENST00000559240 RGS12O14924 1447 aa20.64■□□□□ 0.89
PBX1-215ENST00000559240 PXDNLA1KZ92 1463 aa20.64■□□□□ 0.89
PBX1-215ENST00000559240 SLC39A6Q13433 755 aa20.64■□□□□ 0.89
PBX1-215ENST00000559240 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
PBX1-215ENST00000559240 HDGFL1Q5TGJ6 251 aa20.63■□□□□ 0.89
PBX1-215ENST00000559240 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
PBX1-215ENST00000559240 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
PBX1-215ENST00000559240 PRDM4Q9UKN5 801 aa20.63■□□□□ 0.89
PBX1-215ENST00000559240 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
PBX1-215ENST00000559240 BTAF1O14981 1849 aa20.63■□□□□ 0.89
PBX1-215ENST00000559240 TEX13AQ9BXU3 409 aaPredicted RBP20.62■□□□□ 0.89
PBX1-215ENST00000559240 API5Q9BZZ5 524 aaKnown RBP20.62■□□□□ 0.89
PBX1-215ENST00000559240 ABCC4O15439 1325 aa20.62■□□□□ 0.89
PBX1-215ENST00000559240 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
PBX1-215ENST00000559240 LY75O60449 1722 aa20.61■□□□□ 0.89
PBX1-215ENST00000559240 PLIN1O60240 522 aa20.61■□□□□ 0.89
PBX1-215ENST00000559240 PRIM1P49642 420 aaKnown RBP20.61■□□□□ 0.89
PBX1-215ENST00000559240 BCL2L13Q9BXK5 485 aa20.61■□□□□ 0.89
PBX1-215ENST00000559240 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
PBX1-215ENST00000559240 TRIM27P14373 513 aa20.6■□□□□ 0.89
PBX1-215ENST00000559240 BBXQ8WY36 941 aaPredicted RBP20.6■□□□□ 0.89
PBX1-215ENST00000559240 COL5A3P25940 1745 aaPredicted RBP20.6■□□□□ 0.89
PBX1-215ENST00000559240 SMARCC1Q92922 1105 aaPredicted RBP20.6■□□□□ 0.89
PBX1-215ENST00000559240 NAP1L2Q9ULW6 460 aaPredicted RBP20.6■□□□□ 0.89
PBX1-215ENST00000559240 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
PBX1-215ENST00000559240 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
PBX1-215ENST00000559240 RGS17Q9UGC6 210 aaPredicted RBP20.59■□□□□ 0.89
PBX1-215ENST00000559240 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.89
PBX1-215ENST00000559240 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.89
PBX1-215ENST00000559240 C20orf194Q5TEA3 1177 aa20.58■□□□□ 0.88
PBX1-215ENST00000559240 HYPKQ9NX55 129 aa20.57■□□□□ 0.88
PBX1-215ENST00000559240 ASAP1Q9ULH1 1129 aa20.57■□□□□ 0.88
PBX1-215ENST00000559240 PDIA6Q15084 440 aa20.57■□□□□ 0.88
PBX1-215ENST00000559240 RXRBP28702 533 aa20.56■□□□□ 0.88
PBX1-215ENST00000559240 LRP10Q7Z4F1 713 aa20.56■□□□□ 0.88
PBX1-215ENST00000559240 NFKBIBQ15653 356 aa20.55■□□□□ 0.88
PBX1-215ENST00000559240 KRT27Q7Z3Y8 459 aa20.55■□□□□ 0.88
PBX1-215ENST00000559240 RGPD3A6NKT7 1758 aaPredicted RBP20.55■□□□□ 0.88
PBX1-215ENST00000559240 RGPD4Q7Z3J3 1758 aa20.55■□□□□ 0.88
PBX1-215ENST00000559240 FLIIQ13045 1269 aa20.55■□□□□ 0.88
PBX1-215ENST00000559240 MVPQ14764 893 aaKnown RBP20.55■□□□□ 0.88
PBX1-215ENST00000559240 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
PBX1-215ENST00000559240 CHPF2Q9P2E5 772 aa20.55■□□□□ 0.88
PBX1-215ENST00000559240 INTS3Q68E01 1043 aaKnown RBP20.54■□□□□ 0.88
PBX1-215ENST00000559240 CRBNQ96SW2 442 aa20.54■□□□□ 0.88
PBX1-215ENST00000559240 ATP10DQ9P241 1426 aa20.54■□□□□ 0.88
PBX1-215ENST00000559240 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
PBX1-215ENST00000559240 RLBP1P12271 317 aa20.54■□□□□ 0.88
PBX1-215ENST00000559240 A0A0G2JS52 829 aa20.53■□□□□ 0.88
PBX1-215ENST00000559240 USP16Q9Y5T5 823 aa20.53■□□□□ 0.88
PBX1-215ENST00000559240 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
PBX1-215ENST00000559240 NUP188Q5SRE5 1749 aa20.53■□□□□ 0.88
PBX1-215ENST00000559240 FTSJ3Q8IY81 847 aaKnown RBP20.52■□□□□ 0.88
PBX1-215ENST00000559240 EIF2S2P20042 333 aaKnown RBP20.52■□□□□ 0.87
PBX1-215ENST00000559240 G2E3Q7L622 706 aa20.52■□□□□ 0.87
PBX1-215ENST00000559240 EXOC6Q8TAG9 804 aa20.52■□□□□ 0.87
PBX1-215ENST00000559240 PANK1Q8TE04 598 aa20.51■□□□□ 0.87
PBX1-215ENST00000559240 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
PBX1-215ENST00000559240 DDX19BQ9UMR2 479 aa20.51■□□□□ 0.87
PBX1-215ENST00000559240 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
PBX1-215ENST00000559240 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
PBX1-215ENST00000559240 TCERG1O14776 1098 aaKnown RBP20.5■□□□□ 0.87
PBX1-215ENST00000559240 KCNQ2O43526 872 aa20.5■□□□□ 0.87
PBX1-215ENST00000559240 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
PBX1-215ENST00000559240 TNNQ9UQP3 1299 aa20.5■□□□□ 0.87
PBX1-215ENST00000559240 ARFGEF2Q9Y6D5 1785 aa20.5■□□□□ 0.87
PBX1-215ENST00000559240 STARD3NLO95772 234 aa20.49■□□□□ 0.87
PBX1-215ENST00000559240 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
PBX1-215ENST00000559240 CCT4P50991 539 aaKnown RBP20.48■□□□□ 0.87
PBX1-215ENST00000559240 POTEAQ6S8J7 498 aa20.48■□□□□ 0.87
PBX1-215ENST00000559240 TMEM57Q8N5G2 664 aa20.48■□□□□ 0.87
PBX1-215ENST00000559240 TNS1Q9HBL0 1735 aaKnown RBP20.48■□□□□ 0.87
PBX1-215ENST00000559240 CYP19A1P11511 503 aaPredicted RBP20.48■□□□□ 0.87
PBX1-215ENST00000559240 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
PBX1-215ENST00000559240 SIK1P57059 783 aa20.48■□□□□ 0.87
PBX1-215ENST00000559240 ADCY9O60503 1353 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms