RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
PSMA4-208ENST00000558639 MAP10Q9P2G4 905 aa11.09□□□□□ -0.63
PSMA4-208ENST00000558639 FKBPLQ9UIM3 349 aa11.09□□□□□ -0.63
PSMA4-208ENST00000558639 SOX11P35716 441 aa11.08□□□□□ -0.64
PSMA4-208ENST00000558639 C8orf37Q96NL8 207 aa11.08□□□□□ -0.64
PSMA4-208ENST00000558639 EVA1BQ9NVM1 165 aa11.08□□□□□ -0.64
PSMA4-208ENST00000558639 SPHKAPQ2M3C7 1700 aa11.08□□□□□ -0.64
PSMA4-208ENST00000558639 NAIPQ13075 1403 aa11.08□□□□□ -0.64
PSMA4-208ENST00000558639 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
PSMA4-208ENST00000558639 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 ORAI2Q96SN7 254 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 SLC6A16Q9GZN6 736 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 STK26Q9P289 416 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
PSMA4-208ENST00000558639 RPGRIP1LQ68CZ1 1315 aa11.07□□□□□ -0.64
PSMA4-208ENST00000558639 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
PSMA4-208ENST00000558639 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
PSMA4-208ENST00000558639 KCNH2Q12809 1159 aa11.06□□□□□ -0.64
PSMA4-208ENST00000558639 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
PSMA4-208ENST00000558639 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
PSMA4-208ENST00000558639 AFF2P51816 1311 aa11.06□□□□□ -0.64
PSMA4-208ENST00000558639 KIF1BO60333 1816 aa11.05□□□□□ -0.64
PSMA4-208ENST00000558639 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
PSMA4-208ENST00000558639 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
PSMA4-208ENST00000558639 ZNF516Q92618 1163 aa11.05□□□□□ -0.64
PSMA4-208ENST00000558639 LRP6O75581 1613 aa11.05□□□□□ -0.64
PSMA4-208ENST00000558639 MST1RQ04912 1400 aa11.04□□□□□ -0.64
PSMA4-208ENST00000558639 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
PSMA4-208ENST00000558639 MPHOSPH9Q99550 1183 aa11.04□□□□□ -0.64
PSMA4-208ENST00000558639 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
PSMA4-208ENST00000558639 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
PSMA4-208ENST00000558639 NRXN3Q9Y4C0 1643 aa11.03□□□□□ -0.64
PSMA4-208ENST00000558639 ZBBXA8MT70 800 aa11.03□□□□□ -0.64
PSMA4-208ENST00000558639 NR1H3Q13133 447 aa11.03□□□□□ -0.64
PSMA4-208ENST00000558639 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.64
PSMA4-208ENST00000558639 DCCP43146 1447 aa11.02□□□□□ -0.64
PSMA4-208ENST00000558639 NBPF14Q5TI25 921 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 TMEM132EQ6IEE7 984 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 GPKOWQ92917 476 aaPredicted RBP eCLIP11.02□□□□□ -0.653e-6■□□□□ 9.4
PSMA4-208ENST00000558639 ALG2Q9H553 416 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 NEXMIFQ5QGS0 1516 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 ASXL1Q8IXJ9 1541 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 ROBO2Q9HCK4 1378 aa11.02□□□□□ -0.65
PSMA4-208ENST00000558639 ADGRL3Q9HAR2 1447 aa11.01□□□□□ -0.65
PSMA4-208ENST00000558639 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
PSMA4-208ENST00000558639 PTK2Q05397 1052 aa11.01□□□□□ -0.65
PSMA4-208ENST00000558639 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
PSMA4-208ENST00000558639 ADGRF5Q8IZF2 1346 aa11.01□□□□□ -0.65
PSMA4-208ENST00000558639 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
PSMA4-208ENST00000558639 XRN1Q8IZH2 1706 aaKnown RBP11.01□□□□□ -0.65
PSMA4-208ENST00000558639 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
PSMA4-208ENST00000558639 FOXO3O43524 673 aa11□□□□□ -0.65
PSMA4-208ENST00000558639 FBXO45P0C2W1 286 aa11□□□□□ -0.65
PSMA4-208ENST00000558639 RBM6P78332 1123 aaKnown RBP11□□□□□ -0.65
PSMA4-208ENST00000558639 USP21Q9UK80 565 aa11□□□□□ -0.65
PSMA4-208ENST00000558639 GPSM3Q9Y4H4 160 aa11□□□□□ -0.65
PSMA4-208ENST00000558639 HFM1A2PYH4 1435 aa11□□□□□ -0.65
PSMA4-208ENST00000558639 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
PSMA4-208ENST00000558639 SHPRHQ149N8 1683 aa10.99□□□□□ -0.65
PSMA4-208ENST00000558639 PDXDC2PQ6P474 469 aa10.99□□□□□ -0.65
PSMA4-208ENST00000558639 ZNF592Q92610 1267 aa10.99□□□□□ -0.65
PSMA4-208ENST00000558639 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
PSMA4-208ENST00000558639 PNPLA6Q8IY17 1366 aa10.99□□□□□ -0.65
PSMA4-208ENST00000558639 S1PR4O95977 384 aa10.98□□□□□ -0.65
PSMA4-208ENST00000558639 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
PSMA4-208ENST00000558639 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
PSMA4-208ENST00000558639 CCDC144AA2RUR9 1427 aa10.98□□□□□ -0.65
PSMA4-208ENST00000558639 KCNC4Q03721 635 aa10.97□□□□□ -0.65
PSMA4-208ENST00000558639 NKX2-3Q8TAU0 364 aa10.97□□□□□ -0.65
PSMA4-208ENST00000558639 NALCNQ8IZF0 1738 aa10.95□□□□□ -0.66
PSMA4-208ENST00000558639 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
PSMA4-208ENST00000558639 NPHP3Q7Z494 1330 aa10.95□□□□□ -0.66
PSMA4-208ENST00000558639 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
PSMA4-208ENST00000558639 SAFB2Q14151 953 aaKnown RBP eCLIP10.95□□□□□ -0.66
PSMA4-208ENST00000558639 PTCRAQ6ISU1 281 aaPredicted RBP10.95□□□□□ -0.66
PSMA4-208ENST00000558639 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
PSMA4-208ENST00000558639 TRPC5Q9UL62 973 aaPredicted RBP10.95□□□□□ -0.66
PSMA4-208ENST00000558639 FCF1Q9Y324 198 aaKnown RBP10.95□□□□□ -0.66
PSMA4-208ENST00000558639 PTCH1Q13635 1447 aa10.94□□□□□ -0.66
PSMA4-208ENST00000558639 MCCD1P59942 119 aaPredicted RBP10.94□□□□□ -0.66
PSMA4-208ENST00000558639 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
PSMA4-208ENST00000558639 ARHGAP9Q9BRR9 750 aa10.94□□□□□ -0.66
PSMA4-208ENST00000558639 LRPPRCP42704 1394 aaKnown RBP10.93□□□□□ -0.66
PSMA4-208ENST00000558639 ANKRD30BQ9BXX2 1392 aa10.93□□□□□ -0.66
PSMA4-208ENST00000558639 GGCXP38435 758 aa10.93□□□□□ -0.66
PSMA4-208ENST00000558639 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
PSMA4-208ENST00000558639 ZBTB33Q86T24 672 aa10.93□□□□□ -0.66
PSMA4-208ENST00000558639 POGKQ9P215 609 aa10.93□□□□□ -0.66
PSMA4-208ENST00000558639 PPLO60437 1756 aa10.93□□□□□ -0.66
PSMA4-208ENST00000558639 PLEKHH1Q9ULM0 1364 aa10.92□□□□□ -0.66
PSMA4-208ENST00000558639 PALM3A6NDB9 673 aaPredicted RBP10.92□□□□□ -0.66
PSMA4-208ENST00000558639 RFX1P22670 979 aa10.92□□□□□ -0.66
PSMA4-208ENST00000558639 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
PSMA4-208ENST00000558639 C14orf93Q9H972 538 aaKnown RBP10.92□□□□□ -0.66
PSMA4-208ENST00000558639 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
PSMA4-208ENST00000558639 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms