RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CEP152O94986 1710 aa9.6□□□□□ -0.87
ZEB1-211ENST00000558440 ARHGEF5Q12774 1597 aa9.6□□□□□ -0.87
ZEB1-211ENST00000558440 TMEM259Q4ZIN3 620 aa9.6□□□□□ -0.87
ZEB1-211ENST00000558440 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
ZEB1-211ENST00000558440 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
ZEB1-211ENST00000558440 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
ZEB1-211ENST00000558440 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
ZEB1-211ENST00000558440 PTK2Q05397 1052 aa9.59□□□□□ -0.87
ZEB1-211ENST00000558440 PNMA1Q8ND90 353 aa9.59□□□□□ -0.87
ZEB1-211ENST00000558440 OCSTAMPQ9BR26 566 aa9.59□□□□□ -0.87
ZEB1-211ENST00000558440 EIF2AK4Q9P2K8 1649 aaKnown RBP9.59□□□□□ -0.87
ZEB1-211ENST00000558440 UBR1Q8IWV7 1749 aa9.59□□□□□ -0.87
ZEB1-211ENST00000558440 LRRC7Q96NW7 1537 aa9.58□□□□□ -0.88
ZEB1-211ENST00000558440 TSPY4P0CV99 314 aa9.58□□□□□ -0.88
ZEB1-211ENST00000558440 TSPY10P0CW01 314 aa9.58□□□□□ -0.88
ZEB1-211ENST00000558440 SCARF1Q14162 830 aa9.58□□□□□ -0.88
ZEB1-211ENST00000558440 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
ZEB1-211ENST00000558440 SLC10A4Q96EP9 437 aa9.58□□□□□ -0.88
ZEB1-211ENST00000558440 CDV3Q9UKY7 258 aaKnown RBP9.58□□□□□ -0.88
ZEB1-211ENST00000558440 XIRP1Q702N8 1843 aaKnown RBP9.58□□□□□ -0.88
ZEB1-211ENST00000558440 ABCC3O15438 1527 aa9.57□□□□□ -0.88
ZEB1-211ENST00000558440 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
ZEB1-211ENST00000558440 CCDC116Q8IYX3 515 aa9.57□□□□□ -0.88
ZEB1-211ENST00000558440 PURBQ96QR8 312 aaKnown RBP9.57□□□□□ -0.88
ZEB1-211ENST00000558440 MAST1Q9Y2H9 1570 aa9.56□□□□□ -0.88
ZEB1-211ENST00000558440 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
ZEB1-211ENST00000558440 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
ZEB1-211ENST00000558440 ERVK-7P63135 1459 aa9.55□□□□□ -0.88
ZEB1-211ENST00000558440 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
ZEB1-211ENST00000558440 MEIOBQ8N635 442 aa9.55□□□□□ -0.88
ZEB1-211ENST00000558440 ADAM32Q8TC27 787 aa9.55□□□□□ -0.88
ZEB1-211ENST00000558440 KCTD15Q96SI1 283 aaPredicted RBP9.54□□□□□ -0.88
ZEB1-211ENST00000558440 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
ZEB1-211ENST00000558440 MROH1Q8NDA8 1641 aa9.53□□□□□ -0.88
ZEB1-211ENST00000558440 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-211ENST00000558440 LINC00528Q8N1L1 170 aa9.52□□□□□ -0.89
ZEB1-211ENST00000558440 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
ZEB1-211ENST00000558440 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
ZEB1-211ENST00000558440 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
ZEB1-211ENST00000558440 SLIT1O75093 1534 aa9.51□□□□□ -0.89
ZEB1-211ENST00000558440 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
ZEB1-211ENST00000558440 C6orf118Q5T5N4 469 aa9.51□□□□□ -0.89
ZEB1-211ENST00000558440 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
ZEB1-211ENST00000558440 PIK3C2BO00750 1634 aa9.51□□□□□ -0.89
ZEB1-211ENST00000558440 DUOX2Q9NRD8 1548 aa9.51□□□□□ -0.89
ZEB1-211ENST00000558440 UPP2O95045 317 aa9.5□□□□□ -0.89
ZEB1-211ENST00000558440 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
ZEB1-211ENST00000558440 NBPF20Q3BBV1 942 aa9.5□□□□□ -0.89
ZEB1-211ENST00000558440 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
ZEB1-211ENST00000558440 EID1Q9Y6B2 187 aa9.5□□□□□ -0.89
ZEB1-211ENST00000558440 ARHGAP23Q9P227 1491 aa9.5□□□□□ -0.89
ZEB1-211ENST00000558440 CROCC2H7BZ55 1655 aa9.5□□□□□ -0.89
ZEB1-211ENST00000558440 KDM5AP29375 1690 aaKnown RBP9.49□□□□□ -0.89
ZEB1-211ENST00000558440 ROBO1Q9Y6N7 1651 aa9.49□□□□□ -0.89
ZEB1-211ENST00000558440 LRRC9Q6ZRR7 1453 aa9.49□□□□□ -0.89
ZEB1-211ENST00000558440 BMP2P12643 396 aa9.49□□□□□ -0.89
ZEB1-211ENST00000558440 NPAS3Q8IXF0 933 aa9.49□□□□□ -0.89
ZEB1-211ENST00000558440 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
ZEB1-211ENST00000558440 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
ZEB1-211ENST00000558440 PRDM15P57071 1507 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-211ENST00000558440 LTKP29376 864 aa9.48□□□□□ -0.89
ZEB1-211ENST00000558440 Q6ZVU0 165 aa9.48□□□□□ -0.89
ZEB1-211ENST00000558440 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
ZEB1-211ENST00000558440 MYOM3Q5VTT5 1437 aa9.48□□□□□ -0.89
ZEB1-211ENST00000558440 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
ZEB1-211ENST00000558440 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
ZEB1-211ENST00000558440 RGS17Q9UGC6 210 aaPredicted RBP9.47□□□□□ -0.89
ZEB1-211ENST00000558440 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
ZEB1-211ENST00000558440 PHLPP1O60346 1717 aa9.46□□□□□ -0.89
ZEB1-211ENST00000558440 CBLBQ13191 982 aa9.46□□□□□ -0.9
ZEB1-211ENST00000558440 ERBINQ96RT1 1412 aa9.46□□□□□ -0.9
ZEB1-211ENST00000558440 EFCAB6Q5THR3 1501 aa9.46□□□□□ -0.9
ZEB1-211ENST00000558440 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
ZEB1-211ENST00000558440 MYO5BQ9ULV0 1848 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 ZBBXA8MT70 800 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 ESPNB1AK53 854 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 MAN1A2O60476 641 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 SOS2Q07890 1332 aaPredicted RBP9.45□□□□□ -0.9
ZEB1-211ENST00000558440 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 KANK1Q14678 1352 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 KIF15Q9NS87 1388 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 TMEM2Q9UHN6 1383 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 VPS8Q8N3P4 1428 aa9.45□□□□□ -0.9
ZEB1-211ENST00000558440 H3BM21 787 aa9.44□□□□□ -0.9
ZEB1-211ENST00000558440 FBXO45P0C2W1 286 aa9.44□□□□□ -0.9
ZEB1-211ENST00000558440 GMPRP36959 345 aa9.44□□□□□ -0.9
ZEB1-211ENST00000558440 VEGFBP49765 207 aa9.44□□□□□ -0.9
ZEB1-211ENST00000558440 MAP3K1Q13233 1512 aa9.44□□□□□ -0.9
ZEB1-211ENST00000558440 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
ZEB1-211ENST00000558440 CHD2O14647 1828 aaKnown RBP9.43□□□□□ -0.9
ZEB1-211ENST00000558440 KCNA6P17658 529 aa9.43□□□□□ -0.9
ZEB1-211ENST00000558440 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
ZEB1-211ENST00000558440 PROSER2Q86WR7 435 aaPredicted RBP9.43□□□□□ -0.9
ZEB1-211ENST00000558440 IRF7Q92985 503 aa9.43□□□□□ -0.9
ZEB1-211ENST00000558440 TET3O43151 1660 aa9.42□□□□□ -0.9
ZEB1-211ENST00000558440 NWD1Q149M9 1564 aa9.42□□□□□ -0.9
ZEB1-211ENST00000558440 NKTRP30414 1462 aaKnown RBP9.42□□□□□ -0.9
ZEB1-211ENST00000558440 RAB15P59190 212 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms