RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
SNRPA1-206ENST00000558059 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 DNAJC10Q8IXB1 793 aa11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 KLHL34Q8N239 644 aa11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-206ENST00000558059 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
SNRPA1-206ENST00000558059 CEMIPQ8WUJ3 1361 aa11.72□□□□□ -0.53
SNRPA1-206ENST00000558059 RALBP1Q15311 655 aa11.72□□□□□ -0.53
SNRPA1-206ENST00000558059 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-206ENST00000558059 CHD4Q14839 1912 aa11.71□□□□□ -0.53
SNRPA1-206ENST00000558059 GABBR2O75899 941 aa11.71□□□□□ -0.53
SNRPA1-206ENST00000558059 CYP19A1P11511 503 aaPredicted RBP11.71□□□□□ -0.53
SNRPA1-206ENST00000558059 TEFQ10587 303 aa11.71□□□□□ -0.53
SNRPA1-206ENST00000558059 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
SNRPA1-206ENST00000558059 C4AP0C0L4 1744 aa11.71□□□□□ -0.54
SNRPA1-206ENST00000558059 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
SNRPA1-206ENST00000558059 GYS1P13807 737 aa11.7□□□□□ -0.54
SNRPA1-206ENST00000558059 RFC4P35249 363 aa11.7□□□□□ -0.54
SNRPA1-206ENST00000558059 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
SNRPA1-206ENST00000558059 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
SNRPA1-206ENST00000558059 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
SNRPA1-206ENST00000558059 MMP10P09238 476 aa11.69□□□□□ -0.54
SNRPA1-206ENST00000558059 MCM10Q7L590 875 aa11.69□□□□□ -0.54
SNRPA1-206ENST00000558059 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
SNRPA1-206ENST00000558059 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-206ENST00000558059 PLEKHF1Q96S99 279 aa11.69□□□□□ -0.54
SNRPA1-206ENST00000558059 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 KCNQ3O43525 872 aa11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 YY1P25490 414 aa11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 ZEB1P37275 1124 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 GPR162Q16538 588 aa11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-206ENST00000558059 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-206ENST00000558059 BTBD11A6QL63 1104 aa11.67□□□□□ -0.54
SNRPA1-206ENST00000558059 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-206ENST00000558059 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
SNRPA1-206ENST00000558059 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
SNRPA1-206ENST00000558059 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-206ENST00000558059 KIF13BQ9NQT8 1826 aa11.66□□□□□ -0.54
SNRPA1-206ENST00000558059 YBX3P16989 372 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRPA1-206ENST00000558059 FKBP8Q14318 412 aa11.66□□□□□ -0.54
SNRPA1-206ENST00000558059 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
SNRPA1-206ENST00000558059 STARD3NLO95772 234 aa11.65□□□□□ -0.54
SNRPA1-206ENST00000558059 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
SNRPA1-206ENST00000558059 NFE2L2Q16236 605 aa11.65□□□□□ -0.54
SNRPA1-206ENST00000558059 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-206ENST00000558059 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-206ENST00000558059 NEFMP07197 916 aa11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 TM4SF1P30408 202 aa11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 EIF5P55010 431 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 DDR1Q08345 913 aa11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 PRKRIP1Q9H875 184 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 COL15A1P39059 1388 aa11.64□□□□□ -0.55
SNRPA1-206ENST00000558059 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
SNRPA1-206ENST00000558059 ZPR1O75312 459 aa11.63□□□□□ -0.55
SNRPA1-206ENST00000558059 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
SNRPA1-206ENST00000558059 PARP3Q9Y6F1 533 aa11.63□□□□□ -0.55
SNRPA1-206ENST00000558059 C10orf71Q711Q0 1435 aa11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 N4BP2Q86UW6 1770 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 A1BGP04217 495 aa11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 USP16Q9Y5T5 823 aa11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-206ENST00000558059 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
SNRPA1-206ENST00000558059 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-206ENST00000558059 IL6STP40189 918 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-206ENST00000558059 TGFB2P61812 414 aa11.61□□□□□ -0.55
SNRPA1-206ENST00000558059 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
SNRPA1-206ENST00000558059 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 A0A087WZG4 1122 aa11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 NFIXQ14938 502 aa11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 WWC3Q9ULE0 1092 aa11.6□□□□□ -0.55
SNRPA1-206ENST00000558059 DPEP1P16444 411 aa11.59□□□□□ -0.55
SNRPA1-206ENST00000558059 KCNA3P22001 575 aa11.59□□□□□ -0.55
SNRPA1-206ENST00000558059 RIPK4P57078 832 aa11.59□□□□□ -0.55
SNRPA1-206ENST00000558059 PNISRQ8TF01 805 aaKnown RBP11.59□□□□□ -0.55
SNRPA1-206ENST00000558059 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
SNRPA1-206ENST00000558059 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
SNRPA1-206ENST00000558059 NRXN2Q9P2S2 1712 aa11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-206ENST00000558059 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms