RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 DPEP1P16444 411 aa28.89■■■□□ 2.22
CRNDE-203ENST00000557792 INTS5Q6P9B9 1019 aaKnown RBP28.89■■■□□ 2.22
CRNDE-203ENST00000557792 USP42Q9H9J4 1324 aaKnown RBP28.89■■■□□ 2.21
CRNDE-203ENST00000557792 FKBP8Q14318 412 aa28.87■■■□□ 2.21
CRNDE-203ENST00000557792 MCM10Q7L590 875 aa28.87■■■□□ 2.21
CRNDE-203ENST00000557792 RTF1Q92541 710 aaKnown RBP28.87■■■□□ 2.21
CRNDE-203ENST00000557792 ZNF790Q6PG37 636 aa28.86■■■□□ 2.21
CRNDE-203ENST00000557792 HTATSF1O43719 755 aaKnown RBP28.85■■■□□ 2.21
CRNDE-203ENST00000557792 NEFMP07197 916 aa28.85■■■□□ 2.21
CRNDE-203ENST00000557792 DCTN1Q14203 1278 aa28.85■■■□□ 2.21
CRNDE-203ENST00000557792 TTC5Q8N0Z6 440 aa28.85■■■□□ 2.21
CRNDE-203ENST00000557792 VSIG10Q8N0Z9 540 aa28.85■■■□□ 2.21
CRNDE-203ENST00000557792 PRKRIP1Q9H875 184 aaPredicted RBP28.85■■■□□ 2.21
CRNDE-203ENST00000557792 CYP19A1P11511 503 aaPredicted RBP28.84■■■□□ 2.21
CRNDE-203ENST00000557792 DDR1Q08345 913 aa28.84■■■□□ 2.21
CRNDE-203ENST00000557792 KCPQ6ZWJ8 1503 aa28.84■■■□□ 2.21
CRNDE-203ENST00000557792 KCNA3P22001 575 aa28.83■■■□□ 2.21
CRNDE-203ENST00000557792 ZNF496Q96IT1 587 aaPredicted RBP28.83■■■□□ 2.21
CRNDE-203ENST00000557792 PNNQ9H307 717 aaKnown RBP28.83■■■□□ 2.21
CRNDE-203ENST00000557792 BTBD11A6QL63 1104 aa28.82■■■□□ 2.2
CRNDE-203ENST00000557792 ARHGAP27Q6ZUM4 889 aa28.82■■■□□ 2.2
CRNDE-203ENST00000557792 ARFGEF1Q9Y6D6 1849 aa28.81■■■□□ 2.2
CRNDE-203ENST00000557792 SOS1Q07889 1333 aaPredicted RBP28.81■■■□□ 2.2
CRNDE-203ENST00000557792 KCNQ3O43525 872 aa28.81■■■□□ 2.2
CRNDE-203ENST00000557792 ZNF316A6NFI3 1004 aaPredicted RBP28.79■■■□□ 2.2
CRNDE-203ENST00000557792 KIF3CO14782 793 aa28.79■■■□□ 2.2
CRNDE-203ENST00000557792 NFE2L2Q16236 605 aa28.79■■■□□ 2.2
CRNDE-203ENST00000557792 ZPR1O75312 459 aa28.78■■■□□ 2.2
CRNDE-203ENST00000557792 TM4SF1P30408 202 aa28.78■■■□□ 2.2
CRNDE-203ENST00000557792 POLRMTO00411 1230 aaKnown RBP28.77■■■□□ 2.2
CRNDE-203ENST00000557792 USPL1Q5W0Q7 1092 aa28.77■■■□□ 2.2
CRNDE-203ENST00000557792 PIM2Q9P1W9 311 aa28.77■■■□□ 2.2
CRNDE-203ENST00000557792 UBR2Q8IWV8 1755 aa28.77■■■□□ 2.2
CRNDE-203ENST00000557792 HEG1Q9ULI3 1381 aa28.76■■■□□ 2.2
CRNDE-203ENST00000557792 MAPK8IP3Q9UPT6 1336 aa28.76■■■□□ 2.19
CRNDE-203ENST00000557792 FMNL2Q96PY5 1086 aa28.76■■■□□ 2.19
CRNDE-203ENST00000557792 STARD3NLO95772 234 aa28.75■■■□□ 2.19
CRNDE-203ENST00000557792 HSPA6P17066 643 aa28.75■■■□□ 2.19
CRNDE-203ENST00000557792 ZBTB1Q9Y2K1 713 aa28.75■■■□□ 2.19
CRNDE-203ENST00000557792 COL15A1P39059 1388 aa28.75■■■□□ 2.19
CRNDE-203ENST00000557792 TAF7Q15545 349 aaPredicted RBP28.74■■■□□ 2.19
CRNDE-203ENST00000557792 NARFQ9UHQ1 456 aa28.74■■■□□ 2.19
CRNDE-203ENST00000557792 SIPA1L3O60292 1781 aaPredicted RBP28.73■■■□□ 2.19
CRNDE-203ENST00000557792 CHRNA5P30532 468 aa28.73■■■□□ 2.19
CRNDE-203ENST00000557792 DALRD3Q5D0E6 543 aaKnown RBP28.73■■■□□ 2.19
CRNDE-203ENST00000557792 TEX13AQ9BXU3 409 aaPredicted RBP28.73■■■□□ 2.19
CRNDE-203ENST00000557792 AFDNP55196 1824 aaKnown RBP28.73■■■□□ 2.19
CRNDE-203ENST00000557792 MIS18AQ9NYP9 233 aa28.72■■■□□ 2.19
CRNDE-203ENST00000557792 CANXP27824 592 aaKnown RBP28.71■■■□□ 2.19
CRNDE-203ENST00000557792 THUMPD2Q9BTF0 503 aaKnown RBP28.71■■■□□ 2.19
CRNDE-203ENST00000557792 NFIXQ14938 502 aa28.7■■■□□ 2.18
CRNDE-203ENST00000557792 WDR43Q15061 677 aaKnown RBP eCLIP28.7■■■□□ 2.18
CRNDE-203ENST00000557792 ADAMTS8Q9UP79 889 aa28.7■■■□□ 2.18
CRNDE-203ENST00000557792 NRXN2Q9P2S2 1712 aa28.69■■■□□ 2.18
CRNDE-203ENST00000557792 C9orf131Q5VYM1 1079 aa28.69■■■□□ 2.18
CRNDE-203ENST00000557792 CCDC146Q8IYE0 955 aa28.69■■■□□ 2.18
CRNDE-203ENST00000557792 BCL2L12Q9HB09 334 aa28.69■■■□□ 2.18
CRNDE-203ENST00000557792 RIPK4P57078 832 aa28.68■■■□□ 2.18
CRNDE-203ENST00000557792 USP16Q9Y5T5 823 aa28.68■■■□□ 2.18
CRNDE-203ENST00000557792 PRAMEF22A3QJZ6 481 aa28.67■■■□□ 2.18
CRNDE-203ENST00000557792 A1BGP04217 495 aa28.67■■■□□ 2.18
CRNDE-203ENST00000557792 TMPOP42166 694 aaKnown RBP28.67■■■□□ 2.18
CRNDE-203ENST00000557792 EIF5P55010 431 aaKnown RBP28.67■■■□□ 2.18
CRNDE-203ENST00000557792 SNRPA1P09661 255 aaKnown RBP28.65■■■□□ 2.18
CRNDE-203ENST00000557792 NMRK2Q9NPI5 230 aa28.65■■■□□ 2.18
CRNDE-203ENST00000557792 SBF1O95248 1867 aa28.64■■■□□ 2.18
CRNDE-203ENST00000557792 PNISRQ8TF01 805 aaKnown RBP28.64■■■□□ 2.18
CRNDE-203ENST00000557792 RUNDC1Q96C34 613 aa28.64■■■□□ 2.18
CRNDE-203ENST00000557792 TOMM70O94826 608 aa28.63■■■□□ 2.17
CRNDE-203ENST00000557792 SERPINB2P05120 415 aa28.63■■■□□ 2.17
CRNDE-203ENST00000557792 RRP7AQ9Y3A4 280 aaKnown RBP28.63■■■□□ 2.17
CRNDE-203ENST00000557792 DLEC1Q9Y238 1755 aa28.62■■■□□ 2.17
CRNDE-203ENST00000557792 NEUROD2Q15784 382 aa28.61■■■□□ 2.17
CRNDE-203ENST00000557792 RNF181Q9P0P0 153 aa28.61■■■□□ 2.17
CRNDE-203ENST00000557792 DLG5Q8TDM6 1919 aa28.61■■■□□ 2.17
CRNDE-203ENST00000557792 IL6STP40189 918 aaPredicted RBP28.6■■■□□ 2.17
CRNDE-203ENST00000557792 A0A087WZG4 1122 aa28.59■■■□□ 2.17
CRNDE-203ENST00000557792 CCDC184Q52MB2 194 aa28.59■■■□□ 2.17
CRNDE-203ENST00000557792 ZNF330Q9Y3S2 320 aaPredicted RBP28.59■■■□□ 2.17
CRNDE-203ENST00000557792 PIP4K2AP48426 406 aaPredicted RBP28.58■■■□□ 2.17
CRNDE-203ENST00000557792 EIF4A1P60842 406 aaKnown RBP28.58■■■□□ 2.17
CRNDE-203ENST00000557792 BICDL1Q6ZP65 573 aa28.58■■■□□ 2.17
CRNDE-203ENST00000557792 LMOD3Q0VAK6 560 aa28.57■■■□□ 2.16
CRNDE-203ENST00000557792 TBC1D2BQ9UPU7 963 aa28.57■■■□□ 2.16
CRNDE-203ENST00000557792 CARMIL3Q8ND23 1372 aa28.57■■■□□ 2.16
CRNDE-203ENST00000557792 SCN7AQ01118 1682 aa28.57■■■□□ 2.16
CRNDE-203ENST00000557792 RASSF7Q02833 373 aa28.55■■■□□ 2.16
CRNDE-203ENST00000557792 TBC1D9BQ66K14 1250 aa28.55■■■□□ 2.16
CRNDE-203ENST00000557792 C2CD5Q86YS7 1000 aa28.55■■■□□ 2.16
CRNDE-203ENST00000557792 TRIM35Q9UPQ4 493 aa28.55■■■□□ 2.16
CRNDE-203ENST00000557792 KDM2BQ8NHM5 1336 aa28.54■■■□□ 2.16
CRNDE-203ENST00000557792 APLP1P51693 650 aa28.54■■■□□ 2.16
CRNDE-203ENST00000557792 ANKRD31Q8N7Z5 1873 aa28.53■■■□□ 2.16
CRNDE-203ENST00000557792 NBPF26B4DH59 902 aa28.53■■■□□ 2.16
CRNDE-203ENST00000557792 NBPF10Q6P3W6 841 aaKnown RBP28.53■■■□□ 2.16
CRNDE-203ENST00000557792 NPM2Q86SE8 214 aaKnown RBP28.53■■■□□ 2.16
CRNDE-203ENST00000557792 NBPF15Q8N660 670 aa28.53■■■□□ 2.16
CRNDE-203ENST00000557792 TTLL6Q8N841 843 aa28.53■■■□□ 2.16
CRNDE-203ENST00000557792 TSPYL4Q9UJ04 414 aa28.53■■■□□ 2.16
CRNDE-203ENST00000557792 H0YIN7 160 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms