RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 FHDC1Q9C0D6 1143 aaPredicted RBP8.53□□□□□ -1.04
FOXN3-217ENST00000557572 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
FOXN3-217ENST00000557572 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
FOXN3-217ENST00000557572 ZBBXA8MT70 800 aa8.52□□□□□ -1.05
FOXN3-217ENST00000557572 ELNP15502 786 aa8.52□□□□□ -1.05
FOXN3-217ENST00000557572 FAM182BQ5T319 152 aa8.52□□□□□ -1.05
FOXN3-217ENST00000557572 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-217ENST00000557572 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-217ENST00000557572 ELOA3DA6NLF2 546 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-217ENST00000557572 KHNYNO15037 678 aaKnown RBP8.51□□□□□ -1.05
FOXN3-217ENST00000557572 TNP2Q05952 138 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 ELOA3BQ3SY89 546 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 ELOA3Q8NG57 546 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 RHBDD1Q8TEB9 315 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 XAGE2Q96GT9 111 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
FOXN3-217ENST00000557572 ZNF468Q5VIY5 522 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-217ENST00000557572 NLRP8Q86W28 1048 aa8.5□□□□□ -1.05
FOXN3-217ENST00000557572 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-217ENST00000557572 C9orf172C9J069 976 aa8.49□□□□□ -1.05
FOXN3-217ENST00000557572 USP17L8P0C7I0 530 aa8.49□□□□□ -1.05
FOXN3-217ENST00000557572 FZD5Q13467 585 aa8.49□□□□□ -1.05
FOXN3-217ENST00000557572 M0R082 166 aa8.48□□□□□ -1.05
FOXN3-217ENST00000557572 FBXO45P0C2W1 286 aa8.48□□□□□ -1.05
FOXN3-217ENST00000557572 PLA2G4AP47712 749 aa8.48□□□□□ -1.05
FOXN3-217ENST00000557572 ZNF417Q8TAU3 575 aa8.48□□□□□ -1.05
FOXN3-217ENST00000557572 TP53INP1Q96A56 240 aa8.48□□□□□ -1.05
FOXN3-217ENST00000557572 FMNL2Q96PY5 1086 aa8.48□□□□□ -1.05
FOXN3-217ENST00000557572 ZNF587Q96SQ5 575 aaPredicted RBP8.48□□□□□ -1.05
FOXN3-217ENST00000557572 AIDAQ96BJ3 306 aa8.47□□□□□ -1.05
FOXN3-217ENST00000557572 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
FOXN3-217ENST00000557572 ESCO1Q5FWF5 840 aa8.46□□□□□ -1.06
FOXN3-217ENST00000557572 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
FOXN3-217ENST00000557572 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-217ENST00000557572 COL9A3Q14050 684 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-217ENST00000557572 ADGRE1Q14246 886 aa8.45□□□□□ -1.06
FOXN3-217ENST00000557572 MBTPS1Q14703 1052 aa8.45□□□□□ -1.06
FOXN3-217ENST00000557572 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-217ENST00000557572 TXNRD3Q86VQ6 643 aa8.45□□□□□ -1.06
FOXN3-217ENST00000557572 KRTAP4-9Q9BYQ8 210 aa8.45□□□□□ -1.06
FOXN3-217ENST00000557572 A0A1W2PNR3 127 aa8.44□□□□□ -1.06
FOXN3-217ENST00000557572 ATP4AP20648 1035 aa8.44□□□□□ -1.06
FOXN3-217ENST00000557572 C8orf86Q6ZUL3 223 aa8.44□□□□□ -1.06
FOXN3-217ENST00000557572 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
FOXN3-217ENST00000557572 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
FOXN3-217ENST00000557572 RNF112Q9ULX5 631 aa8.44□□□□□ -1.06
FOXN3-217ENST00000557572 TLR1Q15399 786 aa8.43□□□□□ -1.06
FOXN3-217ENST00000557572 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
FOXN3-217ENST00000557572 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
FOXN3-217ENST00000557572 ARID1BQ8NFD5 2236 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-217ENST00000557572 MCCD1P59942 119 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-217ENST00000557572 TRIM34Q9BYJ4 488 aa8.42□□□□□ -1.06
FOXN3-217ENST00000557572 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
FOXN3-217ENST00000557572 MARK1Q9P0L2 795 aa8.42□□□□□ -1.06
FOXN3-217ENST00000557572 SELPP16109 830 aa8.41□□□□□ -1.06
FOXN3-217ENST00000557572 GJA3Q9Y6H8 435 aa8.41□□□□□ -1.06
FOXN3-217ENST00000557572 IRAK1P51617 712 aa8.4□□□□□ -1.06
FOXN3-217ENST00000557572 MICALL1Q8N3F8 863 aa8.4□□□□□ -1.06
FOXN3-217ENST00000557572 CDCA7Q9BWT1 371 aaPredicted RBP8.4□□□□□ -1.06
FOXN3-217ENST00000557572 PRDM6Q9NQX0 595 aa8.4□□□□□ -1.06
FOXN3-217ENST00000557572 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
FOXN3-217ENST00000557572 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
FOXN3-217ENST00000557572 ALBP02768 609 aa8.39□□□□□ -1.07
FOXN3-217ENST00000557572 FAM157BP0CG42 384 aa8.39□□□□□ -1.07
FOXN3-217ENST00000557572 NID1P14543 1247 aa8.39□□□□□ -1.07
FOXN3-217ENST00000557572 NRG1Q02297 640 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-217ENST00000557572 ETNK1Q9HBU6 452 aa8.38□□□□□ -1.07
FOXN3-217ENST00000557572 RNF114Q9Y508 228 aa8.38□□□□□ -1.07
FOXN3-217ENST00000557572 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
FOXN3-217ENST00000557572 ZNF592Q92610 1267 aa8.37□□□□□ -1.07
FOXN3-217ENST00000557572 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
FOXN3-217ENST00000557572 MDFIQ99750 246 aa8.37□□□□□ -1.07
FOXN3-217ENST00000557572 NIFKQ9BYG3 293 aaKnown RBP8.37□□□□□ -1.07
FOXN3-217ENST00000557572 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
FOXN3-217ENST00000557572 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
FOXN3-217ENST00000557572 SIN3BO75182 1162 aa8.36□□□□□ -1.07
FOXN3-217ENST00000557572 TAL1P17542 331 aaPredicted RBP8.36□□□□□ -1.07
FOXN3-217ENST00000557572 SH3D19Q5HYK7 790 aa8.36□□□□□ -1.07
FOXN3-217ENST00000557572 KRTAP4-2Q9BYR5 136 aa8.36□□□□□ -1.07
FOXN3-217ENST00000557572 USP21Q9UK80 565 aa8.36□□□□□ -1.07
FOXN3-217ENST00000557572 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
FOXN3-217ENST00000557572 VSIG10Q8N0Z9 540 aa8.35□□□□□ -1.07
FOXN3-217ENST00000557572 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-217ENST00000557572 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
FOXN3-217ENST00000557572 TATP17735 454 aaPredicted RBP8.34□□□□□ -1.07
FOXN3-217ENST00000557572 SSTR4P31391 388 aa8.34□□□□□ -1.07
FOXN3-217ENST00000557572 NR1H3Q13133 447 aa8.34□□□□□ -1.07
FOXN3-217ENST00000557572 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
FOXN3-217ENST00000557572 ZIC5Q96T25 663 aa8.34□□□□□ -1.07
FOXN3-217ENST00000557572 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
FOXN3-217ENST00000557572 SSBP4Q9BWG4 385 aaPredicted RBP8.33□□□□□ -1.08
FOXN3-217ENST00000557572 EFSO43281 561 aa8.31□□□□□ -1.08
FOXN3-217ENST00000557572 RFC5P40937 340 aa8.31□□□□□ -1.08
FOXN3-217ENST00000557572 RAC1P63000 192 aa8.31□□□□□ -1.08
FOXN3-217ENST00000557572 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
FOXN3-217ENST00000557572 TNFRSF25Q93038 417 aa8.31□□□□□ -1.08
FOXN3-217ENST00000557572 LILRB5O75023 590 aa8.3□□□□□ -1.08
FOXN3-217ENST00000557572 ADH7P40394 386 aa8.3□□□□□ -1.08
FOXN3-217ENST00000557572 SAMD5Q5TGI4 173 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms