RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
SNX6-209ENST00000557265 PCGF6Q9BYE7 350 aa16.76■□□□□ 0.27
SNX6-209ENST00000557265 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
SNX6-209ENST00000557265 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
SNX6-209ENST00000557265 SERPINB2P05120 415 aa16.75■□□□□ 0.27
SNX6-209ENST00000557265 LMNB1P20700 586 aa16.75■□□□□ 0.27
SNX6-209ENST00000557265 PRELPP51888 382 aa16.75■□□□□ 0.27
SNX6-209ENST00000557265 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
SNX6-209ENST00000557265 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
SNX6-209ENST00000557265 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
SNX6-209ENST00000557265 HMOX1P09601 288 aa16.74■□□□□ 0.27
SNX6-209ENST00000557265 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
SNX6-209ENST00000557265 COL15A1P39059 1388 aa16.74■□□□□ 0.27
SNX6-209ENST00000557265 TJP1Q07157 1748 aa16.73■□□□□ 0.27
SNX6-209ENST00000557265 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
SNX6-209ENST00000557265 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
SNX6-209ENST00000557265 VEGFAP15692 232 aaPredicted RBP16.73■□□□□ 0.27
SNX6-209ENST00000557265 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
SNX6-209ENST00000557265 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
SNX6-209ENST00000557265 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
SNX6-209ENST00000557265 MTHFSDQ2M296 383 aaKnown RBP16.72■□□□□ 0.27
SNX6-209ENST00000557265 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
SNX6-209ENST00000557265 H0YIN7 160 aa16.71■□□□□ 0.27
SNX6-209ENST00000557265 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
SNX6-209ENST00000557265 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
SNX6-209ENST00000557265 ADAMTS7Q9UKP4 1686 aa16.7■□□□□ 0.26
SNX6-209ENST00000557265 NFKBIEO00221 500 aa16.69■□□□□ 0.26
SNX6-209ENST00000557265 CAPN15O75808 1086 aa16.69■□□□□ 0.26
SNX6-209ENST00000557265 STARD3NLO95772 234 aa16.69■□□□□ 0.26
SNX6-209ENST00000557265 MRC1P22897 1456 aa16.68■□□□□ 0.26
SNX6-209ENST00000557265 CARMIL3Q8ND23 1372 aa16.68■□□□□ 0.26
SNX6-209ENST00000557265 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
SNX6-209ENST00000557265 TNS4Q8IZW8 715 aa16.68■□□□□ 0.26
SNX6-209ENST00000557265 A0A087WZG4 1122 aa16.67■□□□□ 0.26
SNX6-209ENST00000557265 DIAPH1O60610 1272 aaKnown RBP16.67■□□□□ 0.26
SNX6-209ENST00000557265 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
SNX6-209ENST00000557265 ZNF622Q969S3 477 aaKnown RBP eCLIP16.67■□□□□ 0.264e-7■■□□□ 11.4
SNX6-209ENST00000557265 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
SNX6-209ENST00000557265 POTECB2RU33 542 aa16.66■□□□□ 0.26
SNX6-209ENST00000557265 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SNX6-209ENST00000557265 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
SNX6-209ENST00000557265 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
SNX6-209ENST00000557265 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
SNX6-209ENST00000557265 C21orf2O43822 256 aa16.65■□□□□ 0.26
SNX6-209ENST00000557265 PDE6BP35913 854 aa16.65■□□□□ 0.26
SNX6-209ENST00000557265 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
SNX6-209ENST00000557265 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
SNX6-209ENST00000557265 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
SNX6-209ENST00000557265 TBC1D2BQ9UPU7 963 aa16.65■□□□□ 0.26
SNX6-209ENST00000557265 ZNF330Q9Y3S2 320 aaPredicted RBP16.65■□□□□ 0.26
SNX6-209ENST00000557265 SBF1O95248 1867 aa16.65■□□□□ 0.26
SNX6-209ENST00000557265 HSPA1AP0DMV8 641 aaKnown RBP16.64■□□□□ 0.25
SNX6-209ENST00000557265 HSPA1BP0DMV9 641 aaKnown RBP16.64■□□□□ 0.25
SNX6-209ENST00000557265 ERFEQ4G0M1 354 aa16.64■□□□□ 0.25
SNX6-209ENST00000557265 TEFQ10587 303 aa16.63■□□□□ 0.25
SNX6-209ENST00000557265 CC2D1BQ5T0F9 858 aaKnown RBP16.63■□□□□ 0.25
SNX6-209ENST00000557265 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
SNX6-209ENST00000557265 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
SNX6-209ENST00000557265 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
SNX6-209ENST00000557265 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
SNX6-209ENST00000557265 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
SNX6-209ENST00000557265 NRXN2Q9P2S2 1712 aa16.62■□□□□ 0.25
SNX6-209ENST00000557265 PCNTO95613 3336 aa16.62■□□□□ 0.25
SNX6-209ENST00000557265 PER1O15534 1290 aaPredicted RBP16.61■□□□□ 0.25
SNX6-209ENST00000557265 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
SNX6-209ENST00000557265 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
SNX6-209ENST00000557265 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
SNX6-209ENST00000557265 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
SNX6-209ENST00000557265 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
SNX6-209ENST00000557265 A1BGP04217 495 aa16.6■□□□□ 0.25
SNX6-209ENST00000557265 IL6STP40189 918 aaPredicted RBP16.6■□□□□ 0.25
SNX6-209ENST00000557265 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
SNX6-209ENST00000557265 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
SNX6-209ENST00000557265 TAOK3Q9H2K8 898 aa16.6■□□□□ 0.25
SNX6-209ENST00000557265 NPHP1O15259 732 aa16.59■□□□□ 0.25
SNX6-209ENST00000557265 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
SNX6-209ENST00000557265 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
SNX6-209ENST00000557265 GAS2L2Q8NHY3 880 aa16.59■□□□□ 0.25
SNX6-209ENST00000557265 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
SNX6-209ENST00000557265 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
SNX6-209ENST00000557265 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
SNX6-209ENST00000557265 CAMTA2O94983 1202 aa16.58■□□□□ 0.24
SNX6-209ENST00000557265 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
SNX6-209ENST00000557265 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
SNX6-209ENST00000557265 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
SNX6-209ENST00000557265 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
SNX6-209ENST00000557265 SRGNP10124 158 aa16.57■□□□□ 0.24
SNX6-209ENST00000557265 ST5P78524 1137 aa16.57■□□□□ 0.24
SNX6-209ENST00000557265 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
SNX6-209ENST00000557265 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
SNX6-209ENST00000557265 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
SNX6-209ENST00000557265 KCNQ3O43525 872 aa16.56■□□□□ 0.24
SNX6-209ENST00000557265 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
SNX6-209ENST00000557265 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
SNX6-209ENST00000557265 MKRN1Q9UHC7 482 aaKnown RBP16.56■□□□□ 0.24
SNX6-209ENST00000557265 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
SNX6-209ENST00000557265 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
SNX6-209ENST00000557265 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
SNX6-209ENST00000557265 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
SNX6-209ENST00000557265 PIP4K2AP48426 406 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms