RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 PARP3Q9Y6F1 533 aa18.39■□□□□ 0.53
SDR39U1-214ENST00000555778 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
SDR39U1-214ENST00000555778 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
SDR39U1-214ENST00000555778 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-214ENST00000555778 MCM10Q7L590 875 aa18.38■□□□□ 0.53
SDR39U1-214ENST00000555778 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
SDR39U1-214ENST00000555778 KCNQ3O43525 872 aa18.37■□□□□ 0.53
SDR39U1-214ENST00000555778 DCTN1Q14203 1278 aa18.37■□□□□ 0.53
SDR39U1-214ENST00000555778 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
SDR39U1-214ENST00000555778 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
SDR39U1-214ENST00000555778 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
SDR39U1-214ENST00000555778 ZPR1O75312 459 aa18.35■□□□□ 0.53
SDR39U1-214ENST00000555778 DPEP1P16444 411 aa18.35■□□□□ 0.53
SDR39U1-214ENST00000555778 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-214ENST00000555778 BCS1LQ9Y276 419 aa18.35■□□□□ 0.53
SDR39U1-214ENST00000555778 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
SDR39U1-214ENST00000555778 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
SDR39U1-214ENST00000555778 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-214ENST00000555778 ARFGEF1Q9Y6D6 1849 aa18.34■□□□□ 0.53
SDR39U1-214ENST00000555778 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
SDR39U1-214ENST00000555778 ADCY9O60503 1353 aa18.33■□□□□ 0.53
SDR39U1-214ENST00000555778 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
SDR39U1-214ENST00000555778 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.53
SDR39U1-214ENST00000555778 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
SDR39U1-214ENST00000555778 POLRMTO00411 1230 aaKnown RBP18.33■□□□□ 0.52
SDR39U1-214ENST00000555778 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
SDR39U1-214ENST00000555778 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-214ENST00000555778 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
SDR39U1-214ENST00000555778 BICDL1Q6ZP65 573 aa18.32■□□□□ 0.52
SDR39U1-214ENST00000555778 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-214ENST00000555778 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
SDR39U1-214ENST00000555778 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
SDR39U1-214ENST00000555778 FCHSD2O94868 740 aa18.31■□□□□ 0.52
SDR39U1-214ENST00000555778 STARD3NLO95772 234 aa18.31■□□□□ 0.52
SDR39U1-214ENST00000555778 CHRNA5P30532 468 aa18.31■□□□□ 0.52
SDR39U1-214ENST00000555778 NFIXQ14938 502 aa18.31■□□□□ 0.52
SDR39U1-214ENST00000555778 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
SDR39U1-214ENST00000555778 TGFB2P61812 414 aa18.3■□□□□ 0.52
SDR39U1-214ENST00000555778 DDX10Q13206 875 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-214ENST00000555778 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
SDR39U1-214ENST00000555778 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
SDR39U1-214ENST00000555778 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
SDR39U1-214ENST00000555778 A1BGP04217 495 aa18.29■□□□□ 0.52
SDR39U1-214ENST00000555778 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
SDR39U1-214ENST00000555778 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
SDR39U1-214ENST00000555778 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
SDR39U1-214ENST00000555778 KCNA3P22001 575 aa18.27■□□□□ 0.52
SDR39U1-214ENST00000555778 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SDR39U1-214ENST00000555778 EIF5P55010 431 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-214ENST00000555778 CCDC24Q8N4L8 307 aa18.26■□□□□ 0.51
SDR39U1-214ENST00000555778 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
SDR39U1-214ENST00000555778 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
SDR39U1-214ENST00000555778 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
SDR39U1-214ENST00000555778 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
SDR39U1-214ENST00000555778 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
SDR39U1-214ENST00000555778 SERPINB2P05120 415 aa18.24■□□□□ 0.51
SDR39U1-214ENST00000555778 NEFMP07197 916 aa18.24■□□□□ 0.51
SDR39U1-214ENST00000555778 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
SDR39U1-214ENST00000555778 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
SDR39U1-214ENST00000555778 GPBP1L1Q9HC44 474 aaPredicted RBP18.23■□□□□ 0.51
SDR39U1-214ENST00000555778 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
SDR39U1-214ENST00000555778 A0A087WZG4 1122 aa18.22■□□□□ 0.51
SDR39U1-214ENST00000555778 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
SDR39U1-214ENST00000555778 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
SDR39U1-214ENST00000555778 DALRD3Q5D0E6 543 aaKnown RBP18.22■□□□□ 0.51
SDR39U1-214ENST00000555778 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
SDR39U1-214ENST00000555778 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
SDR39U1-214ENST00000555778 CAMTA2O94983 1202 aa18.21■□□□□ 0.51
SDR39U1-214ENST00000555778 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-214ENST00000555778 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 RASSF7Q02833 373 aa18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 RALBP1Q15311 655 aa18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 SBF1O95248 1867 aa18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-214ENST00000555778 NBPF26B4DH59 902 aa18.19■□□□□ 0.5
SDR39U1-214ENST00000555778 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-214ENST00000555778 NBPF10Q6P3W6 841 aaKnown RBP18.19■□□□□ 0.5
SDR39U1-214ENST00000555778 NBPF15Q8N660 670 aa18.19■□□□□ 0.5
SDR39U1-214ENST00000555778 RRP7AQ9Y3A4 280 aaKnown RBP18.19■□□□□ 0.5
SDR39U1-214ENST00000555778 TNRC6CQ9HCJ0 1690 aaKnown RBP18.18■□□□□ 0.5
SDR39U1-214ENST00000555778 NPHP1O15259 732 aa18.18■□□□□ 0.5
SDR39U1-214ENST00000555778 PRR5LQ6MZQ0 368 aa18.18■□□□□ 0.5
SDR39U1-214ENST00000555778 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
SDR39U1-214ENST00000555778 CEP350Q5VT06 3117 aa18.18■□□□□ 0.5
SDR39U1-214ENST00000555778 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
SDR39U1-214ENST00000555778 ARFGEF2Q9Y6D5 1785 aa18.17■□□□□ 0.5
SDR39U1-214ENST00000555778 CCDC88AQ3V6T2 1871 aa18.16■□□□□ 0.5
SDR39U1-214ENST00000555778 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
SDR39U1-214ENST00000555778 CNBD1Q8NA66 436 aa18.16■□□□□ 0.5
SDR39U1-214ENST00000555778 RNF181Q9P0P0 153 aa18.16■□□□□ 0.5
SDR39U1-214ENST00000555778 ZNF219Q9P2Y4 722 aaPredicted RBP18.16■□□□□ 0.5
SDR39U1-214ENST00000555778 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
SDR39U1-214ENST00000555778 NUP98P52948 1817 aa18.14■□□□□ 0.5
SDR39U1-214ENST00000555778 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
SDR39U1-214ENST00000555778 SETDB2Q96T68 719 aa18.14■□□□□ 0.49
SDR39U1-214ENST00000555778 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
SDR39U1-214ENST00000555778 RIPK4P57078 832 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms