RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 IGSF1Q8N6C5 1336 aa6.93□□□□□ -1.3
LINC00871-201ENST00000555246 GALR2O43603 387 aaPredicted RBP6.92□□□□□ -1.3
LINC00871-201ENST00000555246 SSFA2P28290 1259 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 NEUROD2Q15784 382 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 NLGN2Q8NFZ4 835 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 PIGBQ92521 554 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 PHF12Q96QT6 1004 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 EYA1Q99502 592 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 ADCY9O60503 1353 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 ITGB4P16144 1822 aa6.92□□□□□ -1.3
LINC00871-201ENST00000555246 LOC102724428A0A0B4J2F2 783 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 GRIN3BO60391 1043 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 ZMYND10O75800 440 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 PHKG2P15735 406 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 SIK1P57059 783 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 CAMK2BQ13554 666 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 AMIGO3Q86WK7 504 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 IFNL2Q8IZJ0 200 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 DDX27Q96GQ7 796 aaKnown RBP6.91□□□□□ -1.3
LINC00871-201ENST00000555246 CEP350Q5VT06 3117 aa6.91□□□□□ -1.3
LINC00871-201ENST00000555246 ERVV-2B6SEH9 535 aa6.9□□□□□ -1.3
LINC00871-201ENST00000555246 YBX3P16989 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC00871-201ENST00000555246 C1QTNF8P60827 252 aa6.9□□□□□ -1.3
LINC00871-201ENST00000555246 EIF4A2Q14240 407 aaKnown RBP6.9□□□□□ -1.3
LINC00871-201ENST00000555246 GPR162Q16538 588 aa6.9□□□□□ -1.3
LINC00871-201ENST00000555246 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.3
LINC00871-201ENST00000555246 KDM6AO15550 1401 aaPredicted RBP6.9□□□□□ -1.31
LINC00871-201ENST00000555246 COL5A3P25940 1745 aaPredicted RBP6.9□□□□□ -1.31
LINC00871-201ENST00000555246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.89□□□□□ -1.31
LINC00871-201ENST00000555246 HSP90AB1P08238 724 aaKnown RBP6.89□□□□□ -1.31
LINC00871-201ENST00000555246 EIF4G2P78344 907 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00871-201ENST00000555246 LINC00116Q8NCU8 138 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 DCAF5Q96JK2 942 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 AK7Q96M32 723 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 TMEM106CQ9BVX2 250 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 TMOD3Q9NYL9 352 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 TRPC6Q9Y210 931 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 MRC1P22897 1456 aa6.89□□□□□ -1.31
LINC00871-201ENST00000555246 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 KIAA1551Q9HCM1 1747 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 C10orf71Q711Q0 1435 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 CNTNAP4Q9C0A0 1308 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 GOLGA2Q08379 1002 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 ITPK1Q13572 414 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 AMOTQ4VCS5 1084 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 RC3H1Q5TC82 1133 aaKnown RBP6.88□□□□□ -1.31
LINC00871-201ENST00000555246 ATG3Q9NT62 314 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
LINC00871-201ENST00000555246 ADAMTS7Q9UKP4 1686 aa6.87□□□□□ -1.31
LINC00871-201ENST00000555246 PXDNLA1KZ92 1463 aa6.87□□□□□ -1.31
LINC00871-201ENST00000555246 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-201ENST00000555246 GIGYF1O75420 1035 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-201ENST00000555246 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
LINC00871-201ENST00000555246 SLC4A9Q96Q91 983 aa6.87□□□□□ -1.31
LINC00871-201ENST00000555246 ATP10DQ9P241 1426 aa6.86□□□□□ -1.31
LINC00871-201ENST00000555246 GNPATO15228 680 aa6.86□□□□□ -1.31
LINC00871-201ENST00000555246 HSPA5P11021 654 aaKnown RBP6.86□□□□□ -1.31
LINC00871-201ENST00000555246 ATP6V1AP38606 617 aa6.86□□□□□ -1.31
LINC00871-201ENST00000555246 PANK3Q9H999 370 aa6.86□□□□□ -1.31
LINC00871-201ENST00000555246 KAT6BQ8WYB5 2073 aa6.86□□□□□ -1.31
LINC00871-201ENST00000555246 NPC1L1Q9UHC9 1359 aa6.85□□□□□ -1.31
LINC00871-201ENST00000555246 C4AP0C0L4 1744 aa6.85□□□□□ -1.31
LINC00871-201ENST00000555246 TGFB2P61812 414 aa6.85□□□□□ -1.31
LINC00871-201ENST00000555246 MKRN3Q13064 507 aaKnown RBP6.85□□□□□ -1.31
LINC00871-201ENST00000555246 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
LINC00871-201ENST00000555246 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
LINC00871-201ENST00000555246 MS4A3Q96HJ5 214 aa6.85□□□□□ -1.31
LINC00871-201ENST00000555246 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
LINC00871-201ENST00000555246 TJP1Q07157 1748 aa6.84□□□□□ -1.31
LINC00871-201ENST00000555246 RPS6KA4O75676 772 aa6.84□□□□□ -1.31
LINC00871-201ENST00000555246 PHF14O94880 888 aa6.84□□□□□ -1.31
LINC00871-201ENST00000555246 IL13P35225 146 aa6.84□□□□□ -1.31
LINC00871-201ENST00000555246 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
LINC00871-201ENST00000555246 RBM26Q5T8P6 1007 aaKnown RBP6.84□□□□□ -1.31
LINC00871-201ENST00000555246 ZNF530Q6P9A1 599 aaPredicted RBP6.84□□□□□ -1.31
LINC00871-201ENST00000555246 COL3A1P02461 1466 aaPredicted RBP6.84□□□□□ -1.31
LINC00871-201ENST00000555246 KIF7Q2M1P5 1343 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 USP42Q9H9J4 1324 aaKnown RBP6.83□□□□□ -1.32
LINC00871-201ENST00000555246 SCN11AQ9UI33 1791 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 KCPQ6ZWJ8 1503 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 SENP3-EIF4A1A0A087X0R7 540 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 PER1O15534 1290 aaPredicted RBP6.83□□□□□ -1.32
LINC00871-201ENST00000555246 MMP10P09238 476 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 GYS1P13807 737 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 TNNT2P45379 298 aaPredicted RBP6.83□□□□□ -1.32
LINC00871-201ENST00000555246 PPP1R15BQ5SWA1 713 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 TRAPPC3LQ5T215 181 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 MORC1Q86VD1 984 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 AEBP1Q8IUX7 1158 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 PELP1Q8IZL8 1130 aaKnown RBP6.83□□□□□ -1.32
LINC00871-201ENST00000555246 GPHNQ9NQX3 736 aaPredicted RBP6.83□□□□□ -1.32
LINC00871-201ENST00000555246 KNSTRNQ9Y448 316 aa6.83□□□□□ -1.32
LINC00871-201ENST00000555246 BRCA1P38398 1863 aaKnown RBP6.83□□□□□ -1.32
LINC00871-201ENST00000555246 MTHFSP49914 203 aa6.82□□□□□ -1.32
LINC00871-201ENST00000555246 CABP4P57796 275 aa6.82□□□□□ -1.32
LINC00871-201ENST00000555246 AKAP4Q5JQC9 854 aa6.82□□□□□ -1.32
LINC00871-201ENST00000555246 C1orf141Q5JVX7 400 aa6.82□□□□□ -1.32
LINC00871-201ENST00000555246 SMIM5Q71RC9 77 aa6.82□□□□□ -1.32
LINC00871-201ENST00000555246 MYH14Q7Z406 1995 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms