RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
APEX1-208ENST00000554813 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
APEX1-208ENST00000554813 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
APEX1-208ENST00000554813 MIS18AQ9NYP9 233 aa17.41■□□□□ 0.38
APEX1-208ENST00000554813 ZPR1O75312 459 aa17.4■□□□□ 0.38
APEX1-208ENST00000554813 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
APEX1-208ENST00000554813 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
APEX1-208ENST00000554813 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
APEX1-208ENST00000554813 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
APEX1-208ENST00000554813 GYS1P13807 737 aa17.39■□□□□ 0.37
APEX1-208ENST00000554813 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
APEX1-208ENST00000554813 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
APEX1-208ENST00000554813 MMP10P09238 476 aa17.38■□□□□ 0.37
APEX1-208ENST00000554813 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
APEX1-208ENST00000554813 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
APEX1-208ENST00000554813 A0A087WZG4 1122 aa17.37■□□□□ 0.37
APEX1-208ENST00000554813 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
APEX1-208ENST00000554813 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
APEX1-208ENST00000554813 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
APEX1-208ENST00000554813 USP42Q9H9J4 1324 aaKnown RBP17.37■□□□□ 0.37
APEX1-208ENST00000554813 A1BGP04217 495 aa17.36■□□□□ 0.37
APEX1-208ENST00000554813 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
APEX1-208ENST00000554813 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
APEX1-208ENST00000554813 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
APEX1-208ENST00000554813 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
APEX1-208ENST00000554813 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
APEX1-208ENST00000554813 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
APEX1-208ENST00000554813 TSPYL4Q9UJ04 414 aa17.35■□□□□ 0.37
APEX1-208ENST00000554813 PARP3Q9Y6F1 533 aa17.35■□□□□ 0.37
APEX1-208ENST00000554813 COL15A1P39059 1388 aa17.35■□□□□ 0.37
APEX1-208ENST00000554813 PRAMEF22A3QJZ6 481 aa17.34■□□□□ 0.37
APEX1-208ENST00000554813 APAF1O14727 1248 aa17.34■□□□□ 0.37
APEX1-208ENST00000554813 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
APEX1-208ENST00000554813 FKBP8Q14318 412 aa17.34■□□□□ 0.37
APEX1-208ENST00000554813 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
APEX1-208ENST00000554813 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
APEX1-208ENST00000554813 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
APEX1-208ENST00000554813 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
APEX1-208ENST00000554813 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
APEX1-208ENST00000554813 GPR162Q16538 588 aa17.31■□□□□ 0.36
APEX1-208ENST00000554813 LAS1LQ9Y4W2 734 aaKnown RBP17.31■□□□□ 0.36
APEX1-208ENST00000554813 CHL1O00533 1208 aa17.3■□□□□ 0.36
APEX1-208ENST00000554813 TM4SF1P30408 202 aa17.3■□□□□ 0.36
APEX1-208ENST00000554813 TBC1D2BQ9UPU7 963 aa17.3■□□□□ 0.36
APEX1-208ENST00000554813 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
APEX1-208ENST00000554813 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
APEX1-208ENST00000554813 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
APEX1-208ENST00000554813 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
APEX1-208ENST00000554813 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
APEX1-208ENST00000554813 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
APEX1-208ENST00000554813 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
APEX1-208ENST00000554813 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
APEX1-208ENST00000554813 TGFB2P61812 414 aa17.27■□□□□ 0.36
APEX1-208ENST00000554813 DDR1Q08345 913 aa17.27■□□□□ 0.36
APEX1-208ENST00000554813 NFIXQ14938 502 aa17.27■□□□□ 0.36
APEX1-208ENST00000554813 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
APEX1-208ENST00000554813 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
APEX1-208ENST00000554813 CFAP44Q96MT7 982 aa17.27■□□□□ 0.36
APEX1-208ENST00000554813 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
APEX1-208ENST00000554813 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
APEX1-208ENST00000554813 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
APEX1-208ENST00000554813 SERPINB2P05120 415 aa17.24■□□□□ 0.35
APEX1-208ENST00000554813 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
APEX1-208ENST00000554813 GNAI1P63096 354 aa17.24■□□□□ 0.35
APEX1-208ENST00000554813 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
APEX1-208ENST00000554813 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
APEX1-208ENST00000554813 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
APEX1-208ENST00000554813 RGL2O15211 777 aa17.23■□□□□ 0.35
APEX1-208ENST00000554813 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
APEX1-208ENST00000554813 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
APEX1-208ENST00000554813 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
APEX1-208ENST00000554813 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
APEX1-208ENST00000554813 IFT57Q9NWB7 429 aa17.23■□□□□ 0.35
APEX1-208ENST00000554813 C10orf71Q711Q0 1435 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 A0A0G2JLW4 131 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 MYL6BP14649 208 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
APEX1-208ENST00000554813 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
APEX1-208ENST00000554813 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.356e-9■■□□□ 12.2
APEX1-208ENST00000554813 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
APEX1-208ENST00000554813 HOXB7P09629 217 aa17.2■□□□□ 0.34
APEX1-208ENST00000554813 DPEP1P16444 411 aa17.2■□□□□ 0.34
APEX1-208ENST00000554813 KIF6Q6ZMV9 814 aa17.2■□□□□ 0.34
APEX1-208ENST00000554813 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
APEX1-208ENST00000554813 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
APEX1-208ENST00000554813 NPHP1O15259 732 aa17.19■□□□□ 0.34
APEX1-208ENST00000554813 YY1P25490 414 aa17.19■□□□□ 0.34
APEX1-208ENST00000554813 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
APEX1-208ENST00000554813 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
APEX1-208ENST00000554813 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
APEX1-208ENST00000554813 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
APEX1-208ENST00000554813 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
APEX1-208ENST00000554813 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
APEX1-208ENST00000554813 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
APEX1-208ENST00000554813 PXDNLA1KZ92 1463 aa17.18■□□□□ 0.34
APEX1-208ENST00000554813 SCN7AQ01118 1682 aa17.17■□□□□ 0.34
APEX1-208ENST00000554813 PDIA6Q15084 440 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms