RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 FMNL2Q96PY5 1086 aa27.37■■□□□ 1.97
HIF1A-206ENST00000553999 MIS18AQ9NYP9 233 aa27.37■■□□□ 1.97
HIF1A-206ENST00000553999 PIP4K2AP48426 406 aaPredicted RBP27.36■■□□□ 1.97
HIF1A-206ENST00000553999 VSIG10Q8N0Z9 540 aa27.36■■□□□ 1.97
HIF1A-206ENST00000553999 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
HIF1A-206ENST00000553999 PARP3Q9Y6F1 533 aa27.36■■□□□ 1.97
HIF1A-206ENST00000553999 PRAMEF22A3QJZ6 481 aa27.35■■□□□ 1.97
HIF1A-206ENST00000553999 ZPR1O75312 459 aa27.35■■□□□ 1.97
HIF1A-206ENST00000553999 STARD3NLO95772 234 aa27.34■■□□□ 1.97
HIF1A-206ENST00000553999 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
HIF1A-206ENST00000553999 CCDC146Q8IYE0 955 aa27.34■■□□□ 1.97
HIF1A-206ENST00000553999 DLG5Q8TDM6 1919 aa27.33■■□□□ 1.97
HIF1A-206ENST00000553999 DDR1Q08345 913 aa27.33■■□□□ 1.97
HIF1A-206ENST00000553999 NFE2L2Q16236 605 aa27.33■■□□□ 1.97
HIF1A-206ENST00000553999 A1BGP04217 495 aa27.32■■□□□ 1.96
HIF1A-206ENST00000553999 RRP7AQ9Y3A4 280 aaKnown RBP27.31■■□□□ 1.96
HIF1A-206ENST00000553999 C10orf71Q711Q0 1435 aa27.3■■□□□ 1.96
HIF1A-206ENST00000553999 A0A0G2JLW4 131 aa27.29■■□□□ 1.96
HIF1A-206ENST00000553999 BICDL1Q6ZP65 573 aa27.29■■□□□ 1.96
HIF1A-206ENST00000553999 USP16Q9Y5T5 823 aa27.29■■□□□ 1.96
HIF1A-206ENST00000553999 PXDNLA1KZ92 1463 aa27.29■■□□□ 1.96
HIF1A-206ENST00000553999 N4BP2Q86UW6 1770 aaPredicted RBP27.28■■□□□ 1.96
HIF1A-206ENST00000553999 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
HIF1A-206ENST00000553999 NARFQ9UHQ1 456 aa27.28■■□□□ 1.96
HIF1A-206ENST00000553999 TBC1D2BQ9UPU7 963 aa27.28■■□□□ 1.96
HIF1A-206ENST00000553999 WDR43Q15061 677 aaKnown RBP eCLIP27.27■■□□□ 1.96
HIF1A-206ENST00000553999 TAF7Q15545 349 aaPredicted RBP27.27■■□□□ 1.96
HIF1A-206ENST00000553999 PRKRIP1Q9H875 184 aaPredicted RBP27.27■■□□□ 1.96
HIF1A-206ENST00000553999 NEUROD2Q15784 382 aa27.26■■□□□ 1.95
HIF1A-206ENST00000553999 TEX13AQ9BXU3 409 aaPredicted RBP27.26■■□□□ 1.95
HIF1A-206ENST00000553999 PNNQ9H307 717 aaKnown RBP27.26■■□□□ 1.95
HIF1A-206ENST00000553999 BCL2L12Q9HB09 334 aa27.26■■□□□ 1.95
HIF1A-206ENST00000553999 DPEP1P16444 411 aa27.25■■□□□ 1.95
HIF1A-206ENST00000553999 NFIXQ14938 502 aa27.25■■□□□ 1.95
HIF1A-206ENST00000553999 POLRMTO00411 1230 aaKnown RBP27.24■■□□□ 1.95
HIF1A-206ENST00000553999 EIF5P55010 431 aaKnown RBP27.24■■□□□ 1.95
HIF1A-206ENST00000553999 RIPK4P57078 832 aa27.24■■□□□ 1.95
HIF1A-206ENST00000553999 CHD4Q14839 1912 aa27.24■■□□□ 1.95
HIF1A-206ENST00000553999 GRIN3BO60391 1043 aa27.23■■□□□ 1.95
HIF1A-206ENST00000553999 SNRPA1P09661 255 aaKnown RBP27.23■■□□□ 1.95
HIF1A-206ENST00000553999 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
HIF1A-206ENST00000553999 KIAA1551Q9HCM1 1747 aa27.23■■□□□ 1.95
HIF1A-206ENST00000553999 ZNF784Q8NCA9 323 aaPredicted RBP27.22■■□□□ 1.95
HIF1A-206ENST00000553999 BCS1LQ9Y276 419 aa27.22■■□□□ 1.95
HIF1A-206ENST00000553999 KIF13BQ9NQT8 1826 aa27.22■■□□□ 1.95
HIF1A-206ENST00000553999 A0A087WZG4 1122 aa27.21■■□□□ 1.95
HIF1A-206ENST00000553999 TM4SF1P30408 202 aa27.21■■□□□ 1.95
HIF1A-206ENST00000553999 CHRNA5P30532 468 aa27.2■■□□□ 1.94
HIF1A-206ENST00000553999 IL6STP40189 918 aaPredicted RBP27.19■■□□□ 1.94
HIF1A-206ENST00000553999 TMPOP42166 694 aaKnown RBP27.19■■□□□ 1.94
HIF1A-206ENST00000553999 TBC1D9BQ66K14 1250 aa27.19■■□□□ 1.94
HIF1A-206ENST00000553999 CCDC24Q8N4L8 307 aa27.19■■□□□ 1.94
HIF1A-206ENST00000553999 ADAMTS8Q9UP79 889 aa27.19■■□□□ 1.94
HIF1A-206ENST00000553999 SCN7AQ01118 1682 aa27.19■■□□□ 1.94
HIF1A-206ENST00000553999 KDM3BQ7LBC6 1761 aa27.18■■□□□ 1.94
HIF1A-206ENST00000553999 TGFB2P61812 414 aa27.18■■□□□ 1.94
HIF1A-206ENST00000553999 SERPINB2P05120 415 aa27.17■■□□□ 1.94
HIF1A-206ENST00000553999 DZIP3Q86Y13 1208 aaKnown RBP27.17■■□□□ 1.94
HIF1A-206ENST00000553999 NGEFQ8N5V2 710 aa27.17■■□□□ 1.94
HIF1A-206ENST00000553999 TSPYL4Q9UJ04 414 aa27.16■■□□□ 1.94
HIF1A-206ENST00000553999 CARMIL3Q8ND23 1372 aa27.16■■□□□ 1.94
HIF1A-206ENST00000553999 SENP3-EIF4A1A0A087X0R7 540 aa27.15■■□□□ 1.94
HIF1A-206ENST00000553999 ZNF316A6NFI3 1004 aaPredicted RBP27.15■■□□□ 1.94
HIF1A-206ENST00000553999 NBPF26B4DH59 902 aa27.15■■□□□ 1.94
HIF1A-206ENST00000553999 NBPF10Q6P3W6 841 aaKnown RBP27.15■■□□□ 1.94
HIF1A-206ENST00000553999 NBPF15Q8N660 670 aa27.15■■□□□ 1.94
HIF1A-206ENST00000553999 PNISRQ8TF01 805 aaKnown RBP27.15■■□□□ 1.94
HIF1A-206ENST00000553999 UTRNP46939 3433 aa27.15■■□□□ 1.94
HIF1A-206ENST00000553999 AFDNP55196 1824 aaKnown RBP27.15■■□□□ 1.94
HIF1A-206ENST00000553999 CAMTA2O94983 1202 aa27.14■■□□□ 1.94
HIF1A-206ENST00000553999 EIF4A1P60842 406 aaKnown RBP27.14■■□□□ 1.94
HIF1A-206ENST00000553999 RUNDC1Q96C34 613 aa27.14■■□□□ 1.94
HIF1A-206ENST00000553999 LAS1LQ9Y4W2 734 aaKnown RBP27.14■■□□□ 1.94
HIF1A-206ENST00000553999 LAMB4A4D0S4 1761 aa27.13■■□□□ 1.93
HIF1A-206ENST00000553999 GOLGB1Q14789 3259 aaKnown RBP27.12■■□□□ 1.93
HIF1A-206ENST00000553999 CCDC184Q52MB2 194 aa27.12■■□□□ 1.93
HIF1A-206ENST00000553999 NPHP1O15259 732 aa27.11■■□□□ 1.93
HIF1A-206ENST00000553999 KCNA3P22001 575 aa27.11■■□□□ 1.93
HIF1A-206ENST00000553999 BCORQ6W2J9 1755 aa27.1■■□□□ 1.93
HIF1A-206ENST00000553999 GIGYF1O75420 1035 aaPredicted RBP27.1■■□□□ 1.93
HIF1A-206ENST00000553999 MYL6BP14649 208 aa27.1■■□□□ 1.93
HIF1A-206ENST00000553999 LMOD3Q0VAK6 560 aa27.1■■□□□ 1.93
HIF1A-206ENST00000553999 ARHGAP27Q6ZUM4 889 aa27.1■■□□□ 1.93
HIF1A-206ENST00000553999 ZNF526Q8TF50 670 aaPredicted RBP27.1■■□□□ 1.93
HIF1A-206ENST00000553999 PIM2Q9P1W9 311 aa27.09■■□□□ 1.93
HIF1A-206ENST00000553999 FAM177BA6PVY3 158 aa27.08■■□□□ 1.93
HIF1A-206ENST00000553999 NECTIN2Q92692 538 aa27.08■■□□□ 1.93
HIF1A-206ENST00000553999 NRXN2Q9P2S2 1712 aa27.07■■□□□ 1.92
HIF1A-206ENST00000553999 C2CD5Q86YS7 1000 aa27.07■■□□□ 1.92
HIF1A-206ENST00000553999 ATP10DQ9P241 1426 aa27.07■■□□□ 1.92
HIF1A-206ENST00000553999 EIF2S2P20042 333 aaKnown RBP27.06■■□□□ 1.92
HIF1A-206ENST00000553999 DALRD3Q5D0E6 543 aaKnown RBP27.06■■□□□ 1.92
HIF1A-206ENST00000553999 SETDB2Q96T68 719 aa27.06■■□□□ 1.92
HIF1A-206ENST00000553999 TRIM35Q9UPQ4 493 aa27.06■■□□□ 1.92
HIF1A-206ENST00000553999 BRCA1P38398 1863 aaKnown RBP27.06■■□□□ 1.92
HIF1A-206ENST00000553999 KRT24Q2M2I5 525 aa27.05■■□□□ 1.92
HIF1A-206ENST00000553999 PRR5LQ6MZQ0 368 aa27.05■■□□□ 1.92
HIF1A-206ENST00000553999 ANXA1P04083 346 aa27.03■■□□□ 1.92
HIF1A-206ENST00000553999 HLFQ16534 295 aa27.03■■□□□ 1.92
HIF1A-206ENST00000553999 CNBD1Q8NA66 436 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms