RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 TM4SF1P30408 202 aa23.46■■□□□ 1.35
SDR39U1-206ENST00000553930 ZNF496Q96IT1 587 aaPredicted RBP23.46■■□□□ 1.35
SDR39U1-206ENST00000553930 NARFQ9UHQ1 456 aa23.46■■□□□ 1.35
SDR39U1-206ENST00000553930 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
SDR39U1-206ENST00000553930 KIAA1551Q9HCM1 1747 aa23.46■■□□□ 1.35
SDR39U1-206ENST00000553930 ATP10DQ9P241 1426 aa23.45■■□□□ 1.34
SDR39U1-206ENST00000553930 FCHSD2O94868 740 aa23.45■■□□□ 1.34
SDR39U1-206ENST00000553930 BCS1LQ9Y276 419 aa23.45■■□□□ 1.34
SDR39U1-206ENST00000553930 ADCY9O60503 1353 aa23.45■■□□□ 1.34
SDR39U1-206ENST00000553930 POLRMTO00411 1230 aaKnown RBP23.44■■□□□ 1.34
SDR39U1-206ENST00000553930 TEX13AQ9BXU3 409 aaPredicted RBP23.44■■□□□ 1.34
SDR39U1-206ENST00000553930 HEG1Q9ULI3 1381 aa23.44■■□□□ 1.34
SDR39U1-206ENST00000553930 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
SDR39U1-206ENST00000553930 KCNA3P22001 575 aa23.42■■□□□ 1.34
SDR39U1-206ENST00000553930 CANXP27824 592 aaKnown RBP23.42■■□□□ 1.34
SDR39U1-206ENST00000553930 BTBD11A6QL63 1104 aa23.41■■□□□ 1.34
SDR39U1-206ENST00000553930 FMNL2Q96PY5 1086 aa23.41■■□□□ 1.34
SDR39U1-206ENST00000553930 SIPA1L3O60292 1781 aaPredicted RBP23.4■■□□□ 1.34
SDR39U1-206ENST00000553930 EIF5P55010 431 aaKnown RBP23.4■■□□□ 1.34
SDR39U1-206ENST00000553930 NFIXQ14938 502 aa23.39■■□□□ 1.34
SDR39U1-206ENST00000553930 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.34
SDR39U1-206ENST00000553930 BCL2L12Q9HB09 334 aa23.39■■□□□ 1.34
SDR39U1-206ENST00000553930 GPBP1L1Q9HC44 474 aaPredicted RBP23.39■■□□□ 1.34
SDR39U1-206ENST00000553930 PIM2Q9P1W9 311 aa23.39■■□□□ 1.34
SDR39U1-206ENST00000553930 A0A087WZG4 1122 aa23.38■■□□□ 1.33
SDR39U1-206ENST00000553930 KCNQ3O43525 872 aa23.37■■□□□ 1.33
SDR39U1-206ENST00000553930 HTATSF1O43719 755 aaKnown RBP23.36■■□□□ 1.33
SDR39U1-206ENST00000553930 ARHGAP27Q6ZUM4 889 aa23.36■■□□□ 1.33
SDR39U1-206ENST00000553930 MCM10Q7L590 875 aa23.36■■□□□ 1.33
SDR39U1-206ENST00000553930 IL6STP40189 918 aaPredicted RBP23.35■■□□□ 1.33
SDR39U1-206ENST00000553930 DALRD3Q5D0E6 543 aaKnown RBP23.35■■□□□ 1.33
SDR39U1-206ENST00000553930 ZNF526Q8TF50 670 aaPredicted RBP23.35■■□□□ 1.33
SDR39U1-206ENST00000553930 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
SDR39U1-206ENST00000553930 CHRNA5P30532 468 aa23.34■■□□□ 1.33
SDR39U1-206ENST00000553930 SERPINB2P05120 415 aa23.33■■□□□ 1.33
SDR39U1-206ENST00000553930 BRCA1P38398 1863 aaKnown RBP23.33■■□□□ 1.33
SDR39U1-206ENST00000553930 A1BGP04217 495 aa23.33■■□□□ 1.32
SDR39U1-206ENST00000553930 NEFMP07197 916 aa23.33■■□□□ 1.32
SDR39U1-206ENST00000553930 DCTN1Q14203 1278 aa23.33■■□□□ 1.32
SDR39U1-206ENST00000553930 ZNF330Q9Y3S2 320 aaPredicted RBP23.33■■□□□ 1.32
SDR39U1-206ENST00000553930 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
SDR39U1-206ENST00000553930 TBC1D2BQ9UPU7 963 aa23.32■■□□□ 1.32
SDR39U1-206ENST00000553930 NRXN2Q9P2S2 1712 aa23.31■■□□□ 1.32
SDR39U1-206ENST00000553930 BICDL1Q6ZP65 573 aa23.31■■□□□ 1.32
SDR39U1-206ENST00000553930 CEP350Q5VT06 3117 aa23.3■■□□□ 1.32
SDR39U1-206ENST00000553930 SNRPA1P09661 255 aaKnown RBP23.3■■□□□ 1.32
SDR39U1-206ENST00000553930 TBC1D9BQ66K14 1250 aa23.3■■□□□ 1.32
SDR39U1-206ENST00000553930 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
SDR39U1-206ENST00000553930 PRAMEF22A3QJZ6 481 aa23.28■■□□□ 1.32
SDR39U1-206ENST00000553930 TAF7Q15545 349 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-206ENST00000553930 PLEKHF1Q96S99 279 aa23.28■■□□□ 1.32
SDR39U1-206ENST00000553930 ARFGEF1Q9Y6D6 1849 aa23.27■■□□□ 1.32
SDR39U1-206ENST00000553930 SCN7AQ01118 1682 aa23.27■■□□□ 1.32
SDR39U1-206ENST00000553930 AFDNP55196 1824 aaKnown RBP23.27■■□□□ 1.32
SDR39U1-206ENST00000553930 CAMTA2O94983 1202 aa23.26■■□□□ 1.31
SDR39U1-206ENST00000553930 RALBP1Q15311 655 aa23.26■■□□□ 1.31
SDR39U1-206ENST00000553930 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-206ENST00000553930 CARMIL3Q8ND23 1372 aa23.25■■□□□ 1.31
SDR39U1-206ENST00000553930 C9orf131Q5VYM1 1079 aa23.25■■□□□ 1.31
SDR39U1-206ENST00000553930 DZIP3Q86Y13 1208 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-206ENST00000553930 C2CD5Q86YS7 1000 aa23.25■■□□□ 1.31
SDR39U1-206ENST00000553930 H0YIN7 160 aa23.24■■□□□ 1.31
SDR39U1-206ENST00000553930 PIP4K2AP48426 406 aaPredicted RBP23.24■■□□□ 1.31
SDR39U1-206ENST00000553930 NFE2L2Q16236 605 aa23.24■■□□□ 1.31
SDR39U1-206ENST00000553930 KIF3CO14782 793 aa23.23■■□□□ 1.31
SDR39U1-206ENST00000553930 TTLL6Q8N841 843 aa23.23■■□□□ 1.31
SDR39U1-206ENST00000553930 PNISRQ8TF01 805 aaKnown RBP23.23■■□□□ 1.31
SDR39U1-206ENST00000553930 SETDB2Q96T68 719 aa23.23■■□□□ 1.31
SDR39U1-206ENST00000553930 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
SDR39U1-206ENST00000553930 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
SDR39U1-206ENST00000553930 PRR5LQ6MZQ0 368 aa23.22■■□□□ 1.31
SDR39U1-206ENST00000553930 BRIP1Q9BX63 1249 aa23.22■■□□□ 1.31
SDR39U1-206ENST00000553930 PDZRN3Q9UPQ7 1066 aa23.22■■□□□ 1.31
SDR39U1-206ENST00000553930 PDE6BP35913 854 aa23.2■■□□□ 1.3
SDR39U1-206ENST00000553930 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-206ENST00000553930 CLEC4GQ6UXB4 293 aa23.2■■□□□ 1.3
SDR39U1-206ENST00000553930 RNF181Q9P0P0 153 aa23.2■■□□□ 1.3
SDR39U1-206ENST00000553930 NBPF26B4DH59 902 aa23.19■■□□□ 1.3
SDR39U1-206ENST00000553930 NBPF10Q6P3W6 841 aaKnown RBP23.19■■□□□ 1.3
SDR39U1-206ENST00000553930 NBPF15Q8N660 670 aa23.19■■□□□ 1.3
SDR39U1-206ENST00000553930 CNBD1Q8NA66 436 aa23.19■■□□□ 1.3
SDR39U1-206ENST00000553930 ZNF652Q9Y2D9 606 aa23.19■■□□□ 1.3
SDR39U1-206ENST00000553930 NPHP1O15259 732 aa23.18■■□□□ 1.3
SDR39U1-206ENST00000553930 CCDC24Q8N4L8 307 aa23.18■■□□□ 1.3
SDR39U1-206ENST00000553930 BCORQ6W2J9 1755 aa23.18■■□□□ 1.3
SDR39U1-206ENST00000553930 DLEC1Q9Y238 1755 aa23.18■■□□□ 1.3
SDR39U1-206ENST00000553930 RGL2O15211 777 aa23.17■■□□□ 1.3
SDR39U1-206ENST00000553930 THUMPD2Q9BTF0 503 aaKnown RBP23.17■■□□□ 1.3
SDR39U1-206ENST00000553930 ST5P78524 1137 aa23.16■■□□□ 1.3
SDR39U1-206ENST00000553930 RASSF7Q02833 373 aa23.16■■□□□ 1.3
SDR39U1-206ENST00000553930 ZNF622Q969S3 477 aaKnown RBP eCLIP23.16■■□□□ 1.3
SDR39U1-206ENST00000553930 EIF4A1P60842 406 aaKnown RBP23.15■■□□□ 1.3
SDR39U1-206ENST00000553930 NMRK2Q9NPI5 230 aa23.15■■□□□ 1.3
SDR39U1-206ENST00000553930 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
SDR39U1-206ENST00000553930 DLG5Q8TDM6 1919 aa23.15■■□□□ 1.3
SDR39U1-206ENST00000553930 HSPA6P17066 643 aa23.14■■□□□ 1.3
SDR39U1-206ENST00000553930 NBPF5PQ86XG9 351 aaPredicted RBP23.14■■□□□ 1.3
SDR39U1-206ENST00000553930 TOMM70O94826 608 aa23.13■■□□□ 1.29
SDR39U1-206ENST00000553930 LMNB1P20700 586 aa23.13■■□□□ 1.29
SDR39U1-206ENST00000553930 ANKRD31Q8N7Z5 1873 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms