RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 C20orf194Q5TEA3 1177 aa15.01□□□□□ -0.01
NEK9-202ENST00000553823 ERICH6BQ5W0A0 696 aa15.01□□□□□ -0.01
NEK9-202ENST00000553823 ATF7IPQ6VMQ6 1270 aa15.01□□□□□ -0.01
NEK9-202ENST00000553823 KRT27Q7Z3Y8 459 aa15.01□□□□□ -0.01
NEK9-202ENST00000553823 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
NEK9-202ENST00000553823 NHSQ6T4R5 1651 aa15□□□□□ -0.01
NEK9-202ENST00000553823 KCNQ2O43526 872 aa15□□□□□ -0.01
NEK9-202ENST00000553823 TRIM27P14373 513 aa15□□□□□ -0.01
NEK9-202ENST00000553823 FAM182BQ5T319 152 aa15□□□□□ -0.01
NEK9-202ENST00000553823 DBF4Q9UBU7 674 aaPredicted RBP15□□□□□ -0.01
NEK9-202ENST00000553823 PTPRCP08575 1304 aa14.99□□□□□ -0.01
NEK9-202ENST00000553823 POTEAQ6S8J7 498 aa14.99□□□□□ -0.01
NEK9-202ENST00000553823 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
NEK9-202ENST00000553823 DZIP1LQ8IYY4 767 aaKnown RBP14.99□□□□□ -0.01
NEK9-202ENST00000553823 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
NEK9-202ENST00000553823 SMARCC1Q92922 1105 aaPredicted RBP14.99□□□□□ -0.01
NEK9-202ENST00000553823 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
NEK9-202ENST00000553823 API5Q9BZZ5 524 aaKnown RBP14.99□□□□□ -0.01
NEK9-202ENST00000553823 CHPF2Q9P2E5 772 aa14.99□□□□□ -0.01
NEK9-202ENST00000553823 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
NEK9-202ENST00000553823 BTAF1O14981 1849 aa14.99□□□□□ -0.01
NEK9-202ENST00000553823 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
NEK9-202ENST00000553823 G2E3Q7L622 706 aa14.98□□□□□ -0.01
NEK9-202ENST00000553823 PANK1Q8TE04 598 aa14.98□□□□□ -0.01
NEK9-202ENST00000553823 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
NEK9-202ENST00000553823 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
NEK9-202ENST00000553823 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
NEK9-202ENST00000553823 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
NEK9-202ENST00000553823 RLBP1P12271 317 aa14.97□□□□□ -0.01
NEK9-202ENST00000553823 FLIIQ13045 1269 aa14.97□□□□□ -0.01
NEK9-202ENST00000553823 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
NEK9-202ENST00000553823 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
NEK9-202ENST00000553823 RGS12O14924 1447 aa14.96□□□□□ -0.01
NEK9-202ENST00000553823 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
NEK9-202ENST00000553823 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.01
NEK9-202ENST00000553823 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
NEK9-202ENST00000553823 PALLDQ8WX93 1383 aa14.96□□□□□ -0.02
NEK9-202ENST00000553823 ANXA1P04083 346 aa14.95□□□□□ -0.02
NEK9-202ENST00000553823 PDIA6Q15084 440 aa14.95□□□□□ -0.02
NEK9-202ENST00000553823 DNAJC10Q8IXB1 793 aa14.95□□□□□ -0.02
NEK9-202ENST00000553823 SLC4A9Q96Q91 983 aa14.95□□□□□ -0.02
NEK9-202ENST00000553823 COG6Q9Y2V7 657 aa14.95□□□□□ -0.02
NEK9-202ENST00000553823 ABCC4O15439 1325 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 LOC102724428A0A0B4J2F2 783 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 STARD3NLO95772 234 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 SIK1P57059 783 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 FKBP5Q13451 457 aaPredicted RBP14.94□□□□□ -0.02
NEK9-202ENST00000553823 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
NEK9-202ENST00000553823 PHAXQ9H814 394 aaKnown RBP14.94□□□□□ -0.02
NEK9-202ENST00000553823 TJP1Q07157 1748 aa14.94□□□□□ -0.02
NEK9-202ENST00000553823 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
NEK9-202ENST00000553823 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
NEK9-202ENST00000553823 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
NEK9-202ENST00000553823 CICQ96RK0 1608 aaPredicted RBP14.92□□□□□ -0.02
NEK9-202ENST00000553823 A1BGP04217 495 aa14.92□□□□□ -0.02
NEK9-202ENST00000553823 MYL6BP14649 208 aa14.92□□□□□ -0.02
NEK9-202ENST00000553823 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
NEK9-202ENST00000553823 PPP4R2Q9NY27 417 aa14.92□□□□□ -0.02
NEK9-202ENST00000553823 NBPF26B4DH59 902 aa14.91□□□□□ -0.02
NEK9-202ENST00000553823 CYP19A1P11511 503 aaPredicted RBP14.91□□□□□ -0.02
NEK9-202ENST00000553823 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
NEK9-202ENST00000553823 NBPF10Q6P3W6 841 aaKnown RBP14.91□□□□□ -0.02
NEK9-202ENST00000553823 LRP10Q7Z4F1 713 aa14.91□□□□□ -0.02
NEK9-202ENST00000553823 ITPRIPQ8IWB1 547 aa14.91□□□□□ -0.02
NEK9-202ENST00000553823 NBPF15Q8N660 670 aa14.91□□□□□ -0.02
NEK9-202ENST00000553823 DDX19BQ9UMR2 479 aa14.91□□□□□ -0.02
NEK9-202ENST00000553823 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
NEK9-202ENST00000553823 LY75O60449 1722 aa14.9□□□□□ -0.02
NEK9-202ENST00000553823 F6X3S4 739 aa14.9□□□□□ -0.02
NEK9-202ENST00000553823 TRIM37O94972 964 aa14.9□□□□□ -0.02
NEK9-202ENST00000553823 DDX58O95786 925 aaKnown RBP14.9□□□□□ -0.02
NEK9-202ENST00000553823 PIP4K2AP48426 406 aaPredicted RBP14.9□□□□□ -0.02
NEK9-202ENST00000553823 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
NEK9-202ENST00000553823 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
NEK9-202ENST00000553823 N4BP2Q86UW6 1770 aaPredicted RBP14.89□□□□□ -0.03
NEK9-202ENST00000553823 PI4KAP2A4QPH2 592 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 CCT4P50991 539 aaKnown RBP14.89□□□□□ -0.03
NEK9-202ENST00000553823 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
NEK9-202ENST00000553823 ITPK1Q13572 414 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 AAMPQ13685 434 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 SLC4A10Q6U841 1118 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 KSR2Q6VAB6 950 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 PI4KAP1Q8N8J0 262 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 XAGE3Q8WTP9 111 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
NEK9-202ENST00000553823 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
NEK9-202ENST00000553823 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
NEK9-202ENST00000553823 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
NEK9-202ENST00000553823 ADCY9O60503 1353 aa14.87□□□□□ -0.03
NEK9-202ENST00000553823 MAP3K2Q9Y2U5 619 aa14.87□□□□□ -0.03
NEK9-202ENST00000553823 EP400Q96L91 3159 aa14.87□□□□□ -0.03
NEK9-202ENST00000553823 CRKLP46109 303 aaKnown RBP14.86□□□□□ -0.03
NEK9-202ENST00000553823 ANKRD13DQ6ZTN6 518 aa14.86□□□□□ -0.03
NEK9-202ENST00000553823 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
NEK9-202ENST00000553823 CCDC87Q9NVE4 849 aa14.86□□□□□ -0.03
NEK9-202ENST00000553823 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
NEK9-202ENST00000553823 ZBTB1Q9Y2K1 713 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms