RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 LAMB4A4D0S4 1761 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 LRP10Q7Z4F1 713 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 DNAAF4Q8WXU2 420 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 FMNL2Q96PY5 1086 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
PFDN5-216ENST00000552341 GNAI2P04899 355 aa13.59□□□□□ -0.23
PFDN5-216ENST00000552341 GNAI3P08754 354 aa13.59□□□□□ -0.23
PFDN5-216ENST00000552341 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
PFDN5-216ENST00000552341 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
PFDN5-216ENST00000552341 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
PFDN5-216ENST00000552341 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
PFDN5-216ENST00000552341 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
PFDN5-216ENST00000552341 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
PFDN5-216ENST00000552341 SRCIN1Q9C0H9 1055 aa13.58□□□□□ -0.24
PFDN5-216ENST00000552341 NWD2Q9ULI1 1742 aa13.57□□□□□ -0.24
PFDN5-216ENST00000552341 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
PFDN5-216ENST00000552341 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
PFDN5-216ENST00000552341 ITGB4P16144 1822 aa13.57□□□□□ -0.24
PFDN5-216ENST00000552341 SLIT2O94813 1529 aa13.56□□□□□ -0.24
PFDN5-216ENST00000552341 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
PFDN5-216ENST00000552341 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
PFDN5-216ENST00000552341 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-216ENST00000552341 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
PFDN5-216ENST00000552341 LRP6O75581 1613 aa13.55□□□□□ -0.24
PFDN5-216ENST00000552341 SPATA31A1Q5TZJ5 1347 aa13.55□□□□□ -0.24
PFDN5-216ENST00000552341 PNMA6EA0A0J9YXQ4 647 aa13.54□□□□□ -0.24
PFDN5-216ENST00000552341 SEC24BO95487 1268 aa13.54□□□□□ -0.24
PFDN5-216ENST00000552341 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
PFDN5-216ENST00000552341 HMMRO75330 724 aa13.54□□□□□ -0.24
PFDN5-216ENST00000552341 ALDH1L1O75891 902 aa13.54□□□□□ -0.24
PFDN5-216ENST00000552341 UBTFL1P0CB47 393 aaPredicted RBP13.54□□□□□ -0.24
PFDN5-216ENST00000552341 IBTKQ9P2D0 1353 aaPredicted RBP13.53□□□□□ -0.24
PFDN5-216ENST00000552341 MYL6BP14649 208 aa13.53□□□□□ -0.24
PFDN5-216ENST00000552341 COPS6Q7L5N1 327 aa13.53□□□□□ -0.24
PFDN5-216ENST00000552341 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
PFDN5-216ENST00000552341 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 PIGBQ92521 554 aa13.52□□□□□ -0.24
PFDN5-216ENST00000552341 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.24
PFDN5-216ENST00000552341 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 EXOC5O00471 708 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 PIP4K2AP48426 406 aaPredicted RBP13.52□□□□□ -0.25
PFDN5-216ENST00000552341 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.25
PFDN5-216ENST00000552341 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
PFDN5-216ENST00000552341 ERICH6Q7L0X2 663 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 LINS1Q8NG48 757 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 SSH3Q8TE77 659 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
PFDN5-216ENST00000552341 ARFGEF2Q9Y6D5 1785 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 UTYO14607 1347 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 BCL9O00512 1426 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
PFDN5-216ENST00000552341 POLA2Q14181 598 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
PFDN5-216ENST00000552341 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
PFDN5-216ENST00000552341 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
PFDN5-216ENST00000552341 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
PFDN5-216ENST00000552341 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-216ENST00000552341 ANKRD13DQ6ZTN6 518 aa13.5□□□□□ -0.25
PFDN5-216ENST00000552341 IPO9Q96P70 1041 aaKnown RBP13.5□□□□□ -0.25
PFDN5-216ENST00000552341 ATG3Q9NT62 314 aa13.5□□□□□ -0.25
PFDN5-216ENST00000552341 JCADQ9P266 1359 aa13.5□□□□□ -0.25
PFDN5-216ENST00000552341 MTX1Q13505 466 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 OTUD7AQ8TE49 926 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-216ENST00000552341 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-216ENST00000552341 EXOC6BQ9Y2D4 811 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 NUP188Q5SRE5 1749 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 BCL9LQ86UU0 1499 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 KAZALD1Q96I82 304 aa13.49□□□□□ -0.25
PFDN5-216ENST00000552341 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
PFDN5-216ENST00000552341 GRM8O00222 908 aa13.48□□□□□ -0.25
PFDN5-216ENST00000552341 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
PFDN5-216ENST00000552341 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 A1BGP04217 495 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 GSPT1P15170 499 aaKnown RBP13.47□□□□□ -0.25
PFDN5-216ENST00000552341 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
PFDN5-216ENST00000552341 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
PFDN5-216ENST00000552341 APBB1O00213 710 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 GCKRQ14397 625 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 DDB1Q16531 1140 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 UNC5CLQ8IV45 518 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms