RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
CDK4-207ENST00000550419 MYH14Q7Z406 1995 aaKnown RBP22.86■■□□□ 1.25
CDK4-207ENST00000550419 EIF4A1P60842 406 aaKnown RBP22.85■■□□□ 1.25
CDK4-207ENST00000550419 CFAP44Q96MT7 982 aa22.84■■□□□ 1.25
CDK4-207ENST00000550419 ZBTB7AO95365 584 aa22.83■■□□□ 1.25
CDK4-207ENST00000550419 TRAPPC3LQ5T215 181 aa22.83■■□□□ 1.25
CDK4-207ENST00000550419 PHF14O94880 888 aa22.82■■□□□ 1.24
CDK4-207ENST00000550419 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
CDK4-207ENST00000550419 WWC1Q8IX03 1113 aa22.82■■□□□ 1.24
CDK4-207ENST00000550419 MIER1Q8N108 512 aa22.82■■□□□ 1.24
CDK4-207ENST00000550419 IFT57Q9NWB7 429 aa22.82■■□□□ 1.24
CDK4-207ENST00000550419 COL24A1Q17RW2 1714 aa22.82■■□□□ 1.24
CDK4-207ENST00000550419 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
CDK4-207ENST00000550419 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
CDK4-207ENST00000550419 MSH5O43196 834 aa22.8■■□□□ 1.24
CDK4-207ENST00000550419 PTGER2P43116 358 aa22.8■■□□□ 1.24
CDK4-207ENST00000550419 GNAI1P63096 354 aa22.8■■□□□ 1.24
CDK4-207ENST00000550419 ARHGEF1Q92888 912 aaKnown RBP22.8■■□□□ 1.24
CDK4-207ENST00000550419 SGIP1Q9BQI5 828 aa22.8■■□□□ 1.24
CDK4-207ENST00000550419 ZBTB1Q9Y2K1 713 aa22.8■■□□□ 1.24
CDK4-207ENST00000550419 USP16Q9Y5T5 823 aa22.8■■□□□ 1.24
CDK4-207ENST00000550419 IL16Q14005 1332 aa22.79■■□□□ 1.24
CDK4-207ENST00000550419 IL6STP40189 918 aaPredicted RBP22.78■■□□□ 1.24
CDK4-207ENST00000550419 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
CDK4-207ENST00000550419 ATF5Q9Y2D1 282 aaPredicted RBP22.78■■□□□ 1.24
CDK4-207ENST00000550419 LAMB4A4D0S4 1761 aa22.77■■□□□ 1.24
CDK4-207ENST00000550419 PRAMEF22A3QJZ6 481 aa22.77■■□□□ 1.24
CDK4-207ENST00000550419 RFC4P35249 363 aa22.77■■□□□ 1.24
CDK4-207ENST00000550419 EIF5P55010 431 aaKnown RBP22.77■■□□□ 1.24
CDK4-207ENST00000550419 WDR63Q8IWG1 891 aa22.76■■□□□ 1.23
CDK4-207ENST00000550419 LAS1LQ9Y4W2 734 aaKnown RBP22.76■■□□□ 1.23
CDK4-207ENST00000550419 COL15A1P39059 1388 aa22.76■■□□□ 1.23
CDK4-207ENST00000550419 C4AP0C0L4 1744 aa22.75■■□□□ 1.23
CDK4-207ENST00000550419 A1BGP04217 495 aa22.75■■□□□ 1.23
CDK4-207ENST00000550419 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
CDK4-207ENST00000550419 MBIPQ9NS73 344 aa22.75■■□□□ 1.23
CDK4-207ENST00000550419 A0A087WZG4 1122 aa22.74■■□□□ 1.23
CDK4-207ENST00000550419 HOXB7P09629 217 aa22.74■■□□□ 1.23
CDK4-207ENST00000550419 POLD1P28340 1107 aa22.74■■□□□ 1.23
CDK4-207ENST00000550419 NLGN1Q8N2Q7 840 aa22.74■■□□□ 1.23
CDK4-207ENST00000550419 ERBB4Q15303 1308 aa22.74■■□□□ 1.23
CDK4-207ENST00000550419 USP42Q9H9J4 1324 aaKnown RBP22.74■■□□□ 1.23
CDK4-207ENST00000550419 GYS1P13807 737 aa22.72■■□□□ 1.23
CDK4-207ENST00000550419 NARFQ9UHQ1 456 aa22.72■■□□□ 1.23
CDK4-207ENST00000550419 NBPF26B4DH59 902 aa22.71■■□□□ 1.23
CDK4-207ENST00000550419 NBPF10Q6P3W6 841 aaKnown RBP22.71■■□□□ 1.23
CDK4-207ENST00000550419 NBPF15Q8N660 670 aa22.71■■□□□ 1.23
CDK4-207ENST00000550419 ZPR1O75312 459 aa22.7■■□□□ 1.22
CDK4-207ENST00000550419 NPM2Q86SE8 214 aaKnown RBP22.7■■□□□ 1.22
CDK4-207ENST00000550419 ZNF521Q96K83 1311 aa22.69■■□□□ 1.22
CDK4-207ENST00000550419 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
CDK4-207ENST00000550419 MSL1Q68DK7 614 aa22.69■■□□□ 1.22
CDK4-207ENST00000550419 ARXQ96QS3 562 aa22.69■■□□□ 1.22
CDK4-207ENST00000550419 PPP1R1BQ9UD71 204 aaPredicted RBP22.69■■□□□ 1.22
CDK4-207ENST00000550419 RGL2O15211 777 aa22.68■■□□□ 1.22
CDK4-207ENST00000550419 SRP68Q9UHB9 627 aaKnown RBP22.68■■□□□ 1.22
CDK4-207ENST00000550419 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
CDK4-207ENST00000550419 KRT24Q2M2I5 525 aa22.67■■□□□ 1.22
CDK4-207ENST00000550419 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
CDK4-207ENST00000550419 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
CDK4-207ENST00000550419 CHMP4AQ9BY43 222 aa22.66■■□□□ 1.22
CDK4-207ENST00000550419 PIP4K2AP48426 406 aaPredicted RBP22.64■■□□□ 1.21
CDK4-207ENST00000550419 FKBP8Q14318 412 aa22.64■■□□□ 1.21
CDK4-207ENST00000550419 PDIA6Q15084 440 aa22.64■■□□□ 1.21
CDK4-207ENST00000550419 DZIP3Q86Y13 1208 aaKnown RBP22.64■■□□□ 1.21
CDK4-207ENST00000550419 BCL2L12Q9HB09 334 aa22.64■■□□□ 1.21
CDK4-207ENST00000550419 ZNF330Q9Y3S2 320 aaPredicted RBP22.64■■□□□ 1.21
CDK4-207ENST00000550419 SCN7AQ01118 1682 aa22.63■■□□□ 1.21
CDK4-207ENST00000550419 MMP10P09238 476 aa22.63■■□□□ 1.21
CDK4-207ENST00000550419 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
CDK4-207ENST00000550419 LRP10Q7Z4F1 713 aa22.63■■□□□ 1.21
CDK4-207ENST00000550419 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
CDK4-207ENST00000550419 MYH16Q9H6N6 1097 aa22.63■■□□□ 1.21
CDK4-207ENST00000550419 TBC1D2BQ9UPU7 963 aa22.63■■□□□ 1.21
CDK4-207ENST00000550419 FANCIQ9NVI1 1328 aa22.62■■□□□ 1.21
CDK4-207ENST00000550419 CAMTA2O94983 1202 aa22.62■■□□□ 1.21
CDK4-207ENST00000550419 TM4SF1P30408 202 aa22.62■■□□□ 1.21
CDK4-207ENST00000550419 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
CDK4-207ENST00000550419 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
CDK4-207ENST00000550419 C8orf58Q8NAV2 365 aa22.62■■□□□ 1.21
CDK4-207ENST00000550419 DDX21Q9NR30 783 aaKnown RBP eCLIP22.62■■□□□ 1.21
CDK4-207ENST00000550419 GOLGA2Q08379 1002 aa22.6■■□□□ 1.21
CDK4-207ENST00000550419 FHDC1Q9C0D6 1143 aaPredicted RBP22.6■■□□□ 1.21
CDK4-207ENST00000550419 SPINK5Q9NQ38 1064 aaPredicted RBP22.6■■□□□ 1.21
CDK4-207ENST00000550419 DBF4Q9UBU7 674 aaPredicted RBP22.6■■□□□ 1.21
CDK4-207ENST00000550419 BCORQ6W2J9 1755 aa22.6■■□□□ 1.21
CDK4-207ENST00000550419 ERVV-1B6SEH8 477 aa22.59■■□□□ 1.21
CDK4-207ENST00000550419 MYL6BP14649 208 aa22.59■■□□□ 1.21
CDK4-207ENST00000550419 SYT17Q9BSW7 474 aa22.59■■□□□ 1.21
CDK4-207ENST00000550419 ZNF652Q9Y2D9 606 aa22.59■■□□□ 1.21
CDK4-207ENST00000550419 CD2APQ9Y5K6 639 aa22.59■■□□□ 1.21
CDK4-207ENST00000550419 PARP3Q9Y6F1 533 aa22.59■■□□□ 1.21
CDK4-207ENST00000550419 NFIXQ14938 502 aa22.58■■□□□ 1.21
CDK4-207ENST00000550419 POLRMTO00411 1230 aaKnown RBP22.57■■□□□ 1.2
CDK4-207ENST00000550419 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
CDK4-207ENST00000550419 DDR1Q08345 913 aa22.57■■□□□ 1.2
CDK4-207ENST00000550419 TSPYL6Q8N831 410 aa22.57■■□□□ 1.2
CDK4-207ENST00000550419 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
CDK4-207ENST00000550419 E9PSI1 815 aa22.56■■□□□ 1.2
CDK4-207ENST00000550419 PROSER3Q2NL68 480 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms