RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 COL15A1P39059 1388 aa26.67■■□□□ 1.86
SLC38A1-208ENST00000550173 POLRMTO00411 1230 aaKnown RBP26.66■■□□□ 1.86
SLC38A1-208ENST00000550173 PRKAR2BP31323 418 aa26.66■■□□□ 1.86
SLC38A1-208ENST00000550173 ARHGAP27Q6ZUM4 889 aa26.66■■□□□ 1.86
SLC38A1-208ENST00000550173 NARFQ9UHQ1 456 aa26.66■■□□□ 1.86
SLC38A1-208ENST00000550173 NUDCQ9Y266 331 aa26.66■■□□□ 1.86
SLC38A1-208ENST00000550173 CANXP27824 592 aaKnown RBP26.65■■□□□ 1.86
SLC38A1-208ENST00000550173 BRCA1P38398 1863 aaKnown RBP26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 STARD3NLO95772 234 aa26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 KCNA3P22001 575 aa26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 PPP2R1AP30153 589 aa26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 PHACTR3Q96KR7 559 aa26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 RSPH6AQ9H0K4 717 aa26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 PIM2Q9P1W9 311 aa26.64■■□□□ 1.86
SLC38A1-208ENST00000550173 ZNF790Q6PG37 636 aa26.63■■□□□ 1.85
SLC38A1-208ENST00000550173 ZNF496Q96IT1 587 aaPredicted RBP26.63■■□□□ 1.85
SLC38A1-208ENST00000550173 SIPA1L3O60292 1781 aaPredicted RBP26.61■■□□□ 1.85
SLC38A1-208ENST00000550173 U2AF1L5P0DN76 240 aaPredicted RBP26.61■■□□□ 1.85
SLC38A1-208ENST00000550173 U2AF1Q01081 240 aaKnown RBP eCLIP26.61■■□□□ 1.85
SLC38A1-208ENST00000550173 NFIXQ14938 502 aa26.61■■□□□ 1.85
SLC38A1-208ENST00000550173 HEG1Q9ULI3 1381 aa26.6■■□□□ 1.85
SLC38A1-208ENST00000550173 TEX13AQ9BXU3 409 aaPredicted RBP26.6■■□□□ 1.85
SLC38A1-208ENST00000550173 BCL2L12Q9HB09 334 aa26.6■■□□□ 1.85
SLC38A1-208ENST00000550173 CHRNA5P30532 468 aa26.59■■□□□ 1.85
SLC38A1-208ENST00000550173 DALRD3Q5D0E6 543 aaKnown RBP26.59■■□□□ 1.85
SLC38A1-208ENST00000550173 CEMIPQ8WUJ3 1361 aa26.58■■□□□ 1.85
SLC38A1-208ENST00000550173 ARFGEF1Q9Y6D6 1849 aa26.58■■□□□ 1.85
SLC38A1-208ENST00000550173 EIF5P55010 431 aaKnown RBP26.58■■□□□ 1.85
SLC38A1-208ENST00000550173 FMNL2Q96PY5 1086 aa26.58■■□□□ 1.85
SLC38A1-208ENST00000550173 A0A087WZG4 1122 aa26.57■■□□□ 1.84
SLC38A1-208ENST00000550173 BTBD11A6QL63 1104 aa26.57■■□□□ 1.84
SLC38A1-208ENST00000550173 AFDNP55196 1824 aaKnown RBP26.57■■□□□ 1.84
SLC38A1-208ENST00000550173 SERPINB2P05120 415 aa26.56■■□□□ 1.84
SLC38A1-208ENST00000550173 ZNF330Q9Y3S2 320 aaPredicted RBP26.56■■□□□ 1.84
SLC38A1-208ENST00000550173 RTF1Q92541 710 aaKnown RBP26.55■■□□□ 1.84
SLC38A1-208ENST00000550173 KCNQ3O43525 872 aa26.54■■□□□ 1.84
SLC38A1-208ENST00000550173 BICDL1Q6ZP65 573 aa26.54■■□□□ 1.84
SLC38A1-208ENST00000550173 NRXN2Q9P2S2 1712 aa26.53■■□□□ 1.84
SLC38A1-208ENST00000550173 C9orf131Q5VYM1 1079 aa26.52■■□□□ 1.84
SLC38A1-208ENST00000550173 KIF3CO14782 793 aa26.51■■□□□ 1.83
SLC38A1-208ENST00000550173 A1BGP04217 495 aa26.51■■□□□ 1.83
SLC38A1-208ENST00000550173 IL6STP40189 918 aaPredicted RBP26.51■■□□□ 1.83
SLC38A1-208ENST00000550173 MCM10Q7L590 875 aa26.51■■□□□ 1.83
SLC38A1-208ENST00000550173 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
SLC38A1-208ENST00000550173 TBC1D2BQ9UPU7 963 aa26.51■■□□□ 1.83
SLC38A1-208ENST00000550173 TBC1D9BQ66K14 1250 aa26.49■■□□□ 1.83
SLC38A1-208ENST00000550173 DCTN1Q14203 1278 aa26.47■■□□□ 1.83
SLC38A1-208ENST00000550173 USP16Q9Y5T5 823 aa26.47■■□□□ 1.83
SLC38A1-208ENST00000550173 HTATSF1O43719 755 aaKnown RBP26.46■■□□□ 1.83
SLC38A1-208ENST00000550173 C2CD5Q86YS7 1000 aa26.46■■□□□ 1.83
SLC38A1-208ENST00000550173 RNF181Q9P0P0 153 aa26.46■■□□□ 1.83
SLC38A1-208ENST00000550173 SCN7AQ01118 1682 aa26.46■■□□□ 1.83
SLC38A1-208ENST00000550173 CARMIL3Q8ND23 1372 aa26.46■■□□□ 1.83
SLC38A1-208ENST00000550173 NEFMP07197 916 aa26.45■■□□□ 1.82
SLC38A1-208ENST00000550173 HSPA6P17066 643 aa26.45■■□□□ 1.82
SLC38A1-208ENST00000550173 H0YIN7 160 aa26.44■■□□□ 1.82
SLC38A1-208ENST00000550173 TTLL6Q8N841 843 aa26.44■■□□□ 1.82
SLC38A1-208ENST00000550173 PRAMEF22A3QJZ6 481 aa26.43■■□□□ 1.82
SLC38A1-208ENST00000550173 SNRPA1P09661 255 aaKnown RBP26.43■■□□□ 1.82
SLC38A1-208ENST00000550173 PIP4K2AP48426 406 aaPredicted RBP26.43■■□□□ 1.82
SLC38A1-208ENST00000550173 DZIP3Q86Y13 1208 aaKnown RBP26.43■■□□□ 1.82
SLC38A1-208ENST00000550173 NMRK2Q9NPI5 230 aa26.43■■□□□ 1.82
SLC38A1-208ENST00000550173 DLEC1Q9Y238 1755 aa26.43■■□□□ 1.82
SLC38A1-208ENST00000550173 CAMTA2O94983 1202 aa26.42■■□□□ 1.82
SLC38A1-208ENST00000550173 SBF1O95248 1867 aa26.42■■□□□ 1.82
SLC38A1-208ENST00000550173 TAF7Q15545 349 aaPredicted RBP26.41■■□□□ 1.82
SLC38A1-208ENST00000550173 SETDB2Q96T68 719 aa26.41■■□□□ 1.82
SLC38A1-208ENST00000550173 RASSF7Q02833 373 aa26.4■■□□□ 1.82
SLC38A1-208ENST00000550173 PRR5LQ6MZQ0 368 aa26.4■■□□□ 1.82
SLC38A1-208ENST00000550173 CCDC24Q8N4L8 307 aa26.4■■□□□ 1.82
SLC38A1-208ENST00000550173 NPHP1O15259 732 aa26.39■■□□□ 1.82
SLC38A1-208ENST00000550173 TOMM70O94826 608 aa26.39■■□□□ 1.82
SLC38A1-208ENST00000550173 PDE6BP35913 854 aa26.39■■□□□ 1.82
SLC38A1-208ENST00000550173 BRIP1Q9BX63 1249 aa26.39■■□□□ 1.82
SLC38A1-208ENST00000550173 ANKRD31Q8N7Z5 1873 aa26.38■■□□□ 1.81
SLC38A1-208ENST00000550173 ZNF622Q969S3 477 aaKnown RBP eCLIP26.38■■□□□ 1.81
SLC38A1-208ENST00000550173 PDZRN3Q9UPQ7 1066 aa26.38■■□□□ 1.81
SLC38A1-208ENST00000550173 MIS18AQ9NYP9 233 aa26.37■■□□□ 1.81
SLC38A1-208ENST00000550173 KDM2BQ8NHM5 1336 aa26.37■■□□□ 1.81
SLC38A1-208ENST00000550173 BCORQ6W2J9 1755 aa26.36■■□□□ 1.81
SLC38A1-208ENST00000550173 DLG5Q8TDM6 1919 aa26.36■■□□□ 1.81
SLC38A1-208ENST00000550173 CNBD1Q8NA66 436 aa26.36■■□□□ 1.81
SLC38A1-208ENST00000550173 C16orf71Q8IYS4 520 aaPredicted RBP26.35■■□□□ 1.81
SLC38A1-208ENST00000550173 PLEKHF1Q96S99 279 aa26.35■■□□□ 1.81
SLC38A1-208ENST00000550173 LMNB1P20700 586 aa26.34■■□□□ 1.81
SLC38A1-208ENST00000550173 ST5P78524 1137 aa26.34■■□□□ 1.81
SLC38A1-208ENST00000550173 CLEC4GQ6UXB4 293 aa26.34■■□□□ 1.81
SLC38A1-208ENST00000550173 NBPF26B4DH59 902 aa26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 NFE2L2Q16236 605 aa26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 NBPF10Q6P3W6 841 aaKnown RBP26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 NBPF15Q8N660 670 aa26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 PNNQ9H307 717 aaKnown RBP26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 ZNF219Q9P2Y4 722 aaPredicted RBP26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 ZNF652Q9Y2D9 606 aa26.33■■□□□ 1.81
SLC38A1-208ENST00000550173 COL11A2P13942 1736 aaPredicted RBP26.31■■□□□ 1.8
SLC38A1-208ENST00000550173 PRELPP51888 382 aa26.31■■□□□ 1.8
SLC38A1-208ENST00000550173 RRAGCQ9HB90 399 aa26.31■■□□□ 1.8
SLC38A1-208ENST00000550173 MAPK8IP3Q9UPT6 1336 aa26.31■■□□□ 1.8
SLC38A1-208ENST00000550173 CCDC88AQ3V6T2 1871 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms