RNA–Protein interactions for RNA: ENST00000548851.5

TSFM-209, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3 BASIC

Gene TSFM, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-209ENST00000548851 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
TSFM-209ENST00000548851 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
TSFM-209ENST00000548851 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
TSFM-209ENST00000548851 ANP32CO43423 234 aa13.19□□□□□ -0.3
TSFM-209ENST00000548851 KCNQ3O43525 872 aa13.19□□□□□ -0.3
TSFM-209ENST00000548851 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
TSFM-209ENST00000548851 GYS1P13807 737 aa13.19□□□□□ -0.3
TSFM-209ENST00000548851 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
TSFM-209ENST00000548851 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
TSFM-209ENST00000548851 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
TSFM-209ENST00000548851 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
TSFM-209ENST00000548851 A0A087WZG4 1122 aa13.17□□□□□ -0.3
TSFM-209ENST00000548851 ZPR1O75312 459 aa13.17□□□□□ -0.3
TSFM-209ENST00000548851 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
TSFM-209ENST00000548851 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
TSFM-209ENST00000548851 COL15A1P39059 1388 aa13.17□□□□□ -0.3
TSFM-209ENST00000548851 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
TSFM-209ENST00000548851 MMP10P09238 476 aa13.16□□□□□ -0.3
TSFM-209ENST00000548851 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
TSFM-209ENST00000548851 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
TSFM-209ENST00000548851 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
TSFM-209ENST00000548851 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
TSFM-209ENST00000548851 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
TSFM-209ENST00000548851 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.3
TSFM-209ENST00000548851 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
TSFM-209ENST00000548851 A1BGP04217 495 aa13.14□□□□□ -0.31
TSFM-209ENST00000548851 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
TSFM-209ENST00000548851 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
TSFM-209ENST00000548851 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
TSFM-209ENST00000548851 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
TSFM-209ENST00000548851 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
TSFM-209ENST00000548851 TM4SF1P30408 202 aa13.13□□□□□ -0.31
TSFM-209ENST00000548851 FKBP8Q14318 412 aa13.13□□□□□ -0.31
TSFM-209ENST00000548851 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
TSFM-209ENST00000548851 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
TSFM-209ENST00000548851 NLGN2Q8NFZ4 835 aa13.13□□□□□ -0.31
TSFM-209ENST00000548851 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
TSFM-209ENST00000548851 KIF13BQ9NQT8 1826 aa13.13□□□□□ -0.31
TSFM-209ENST00000548851 RGL2O15211 777 aa13.12□□□□□ -0.31
TSFM-209ENST00000548851 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
TSFM-209ENST00000548851 CCDC184Q52MB2 194 aa13.12□□□□□ -0.31
TSFM-209ENST00000548851 TSPYL4Q9UJ04 414 aa13.12□□□□□ -0.31
TSFM-209ENST00000548851 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 CHL1O00533 1208 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 APAF1O14727 1248 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 TGFB2P61812 414 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
TSFM-209ENST00000548851 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 MRS2Q9HD23 443 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
TSFM-209ENST00000548851 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
TSFM-209ENST00000548851 DDR1Q08345 913 aa13.1□□□□□ -0.31
TSFM-209ENST00000548851 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
TSFM-209ENST00000548851 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 POLRMTO00411 1230 aaKnown RBP13.09□□□□□ -0.31
TSFM-209ENST00000548851 NFIXQ14938 502 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 GPR162Q16538 588 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
TSFM-209ENST00000548851 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 UTRNP46939 3433 aa13.09□□□□□ -0.31
TSFM-209ENST00000548851 SCN7AQ01118 1682 aa13.08□□□□□ -0.31
TSFM-209ENST00000548851 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
TSFM-209ENST00000548851 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
TSFM-209ENST00000548851 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
TSFM-209ENST00000548851 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
TSFM-209ENST00000548851 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
TSFM-209ENST00000548851 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
TSFM-209ENST00000548851 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
TSFM-209ENST00000548851 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
TSFM-209ENST00000548851 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
TSFM-209ENST00000548851 CHD4Q14839 1912 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 PXDNLA1KZ92 1463 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 KIAA1551Q9HCM1 1747 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 SERPINB2P05120 415 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 HOXB7P09629 217 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
TSFM-209ENST00000548851 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
TSFM-209ENST00000548851 ERVV-1B6SEH8 477 aa13.05□□□□□ -0.32
TSFM-209ENST00000548851 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
TSFM-209ENST00000548851 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
TSFM-209ENST00000548851 GNAI1P63096 354 aa13.05□□□□□ -0.32
TSFM-209ENST00000548851 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
TSFM-209ENST00000548851 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
TSFM-209ENST00000548851 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
TSFM-209ENST00000548851 CARMIL3Q8ND23 1372 aa13.05□□□□□ -0.32
TSFM-209ENST00000548851 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
TSFM-209ENST00000548851 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
TSFM-209ENST00000548851 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
TSFM-209ENST00000548851 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
TSFM-209ENST00000548851 DPEP1P16444 411 aa13.03□□□□□ -0.32
TSFM-209ENST00000548851 KCNA3P22001 575 aa13.03□□□□□ -0.32
TSFM-209ENST00000548851 YY1P25490 414 aa13.03□□□□□ -0.32
TSFM-209ENST00000548851 PDIA6Q15084 440 aa13.03□□□□□ -0.32
TSFM-209ENST00000548851 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
TSFM-209ENST00000548851 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms