RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 KCNA3P22001 575 aa27.43■■□□□ 1.98
SSH1-207ENST00000547862 CEP350Q5VT06 3117 aa27.43■■□□□ 1.98
SSH1-207ENST00000547862 NPC1L1Q9UHC9 1359 aa27.43■■□□□ 1.98
SSH1-207ENST00000547862 DLEC1Q9Y238 1755 aa27.43■■□□□ 1.98
SSH1-207ENST00000547862 NRXN2Q9P2S2 1712 aa27.42■■□□□ 1.98
SSH1-207ENST00000547862 PIM2Q9P1W9 311 aa27.42■■□□□ 1.98
SSH1-207ENST00000547862 SCN7AQ01118 1682 aa27.42■■□□□ 1.98
SSH1-207ENST00000547862 KIF3CO14782 793 aa27.41■■□□□ 1.98
SSH1-207ENST00000547862 CANXP27824 592 aaKnown RBP27.41■■□□□ 1.98
SSH1-207ENST00000547862 TEFQ10587 303 aa27.4■■□□□ 1.98
SSH1-207ENST00000547862 DALRD3Q5D0E6 543 aaKnown RBP27.4■■□□□ 1.98
SSH1-207ENST00000547862 GAS2L2Q8NHY3 880 aa27.39■■□□□ 1.98
SSH1-207ENST00000547862 NARFQ9UHQ1 456 aa27.39■■□□□ 1.98
SSH1-207ENST00000547862 SBF1O95248 1867 aa27.38■■□□□ 1.97
SSH1-207ENST00000547862 HSPA6P17066 643 aa27.38■■□□□ 1.97
SSH1-207ENST00000547862 TM4SF1P30408 202 aa27.38■■□□□ 1.97
SSH1-207ENST00000547862 NFIXQ14938 502 aa27.38■■□□□ 1.97
SSH1-207ENST00000547862 C9orf131Q5VYM1 1079 aa27.38■■□□□ 1.97
SSH1-207ENST00000547862 ZNF330Q9Y3S2 320 aaPredicted RBP27.38■■□□□ 1.97
SSH1-207ENST00000547862 GNAT3A8MTJ3 354 aa27.37■■□□□ 1.97
SSH1-207ENST00000547862 BICDL1Q6ZP65 573 aa27.36■■□□□ 1.97
SSH1-207ENST00000547862 VSIG10Q8N0Z9 540 aa27.36■■□□□ 1.97
SSH1-207ENST00000547862 CFAP53Q96M91 514 aa27.35■■□□□ 1.97
SSH1-207ENST00000547862 NMRK2Q9NPI5 230 aa27.35■■□□□ 1.97
SSH1-207ENST00000547862 PRKAR2BP31323 418 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 IL17REQ8NFR9 667 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 ZNF496Q96IT1 587 aaPredicted RBP27.34■■□□□ 1.97
SSH1-207ENST00000547862 BCL2L12Q9HB09 334 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 RNF181Q9P0P0 153 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 ANKRD31Q8N7Z5 1873 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 CARMIL3Q8ND23 1372 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 HEG1Q9ULI3 1381 aa27.34■■□□□ 1.97
SSH1-207ENST00000547862 STARD3NLO95772 234 aa27.33■■□□□ 1.97
SSH1-207ENST00000547862 CACNA1SQ13698 1873 aa27.33■■□□□ 1.97
SSH1-207ENST00000547862 CCDC88AQ3V6T2 1871 aa27.32■■□□□ 1.96
SSH1-207ENST00000547862 SERPINB2P05120 415 aa27.32■■□□□ 1.96
SSH1-207ENST00000547862 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
SSH1-207ENST00000547862 COL11A2P13942 1736 aaPredicted RBP27.32■■□□□ 1.96
SSH1-207ENST00000547862 TIAM2Q8IVF5 1701 aa27.32■■□□□ 1.96
SSH1-207ENST00000547862 BCORQ6W2J9 1755 aa27.32■■□□□ 1.96
SSH1-207ENST00000547862 RASSF7Q02833 373 aa27.31■■□□□ 1.96
SSH1-207ENST00000547862 TNRC6CQ9HCJ0 1690 aaKnown RBP27.3■■□□□ 1.96
SSH1-207ENST00000547862 RSPH6AQ9H0K4 717 aa27.3■■□□□ 1.96
SSH1-207ENST00000547862 PHACTR3Q96KR7 559 aa27.29■■□□□ 1.96
SSH1-207ENST00000547862 A0A087WZG4 1122 aa27.27■■□□□ 1.96
SSH1-207ENST00000547862 EIF5P55010 431 aaKnown RBP27.27■■□□□ 1.96
SSH1-207ENST00000547862 C2CD5Q86YS7 1000 aa27.27■■□□□ 1.96
SSH1-207ENST00000547862 FMNL2Q96PY5 1086 aa27.27■■□□□ 1.96
SSH1-207ENST00000547862 CEMIPQ8WUJ3 1361 aa27.26■■□□□ 1.95
SSH1-207ENST00000547862 KCNQ3O43525 872 aa27.26■■□□□ 1.95
SSH1-207ENST00000547862 U2AF1L5P0DN76 240 aaPredicted RBP27.26■■□□□ 1.95
SSH1-207ENST00000547862 U2AF1Q01081 240 aaKnown RBP eCLIP27.26■■□□□ 1.95
SSH1-207ENST00000547862 TBC1D9BQ66K14 1250 aa27.26■■□□□ 1.95
SSH1-207ENST00000547862 TBC1D2BQ9UPU7 963 aa27.26■■□□□ 1.95
SSH1-207ENST00000547862 NUDCQ9Y266 331 aa27.26■■□□□ 1.95
SSH1-207ENST00000547862 BTBD11A6QL63 1104 aa27.25■■□□□ 1.95
SSH1-207ENST00000547862 C16orf71Q8IYS4 520 aaPredicted RBP27.25■■□□□ 1.95
SSH1-207ENST00000547862 WDR90Q96KV7 1748 aa27.24■■□□□ 1.95
SSH1-207ENST00000547862 TOMM70O94826 608 aa27.24■■□□□ 1.95
SSH1-207ENST00000547862 PPP2R1AP30153 589 aa27.24■■□□□ 1.95
SSH1-207ENST00000547862 CCDC24Q8N4L8 307 aa27.24■■□□□ 1.95
SSH1-207ENST00000547862 A1BGP04217 495 aa27.23■■□□□ 1.95
SSH1-207ENST00000547862 PIP4K2AP48426 406 aaPredicted RBP27.23■■□□□ 1.95
SSH1-207ENST00000547862 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
SSH1-207ENST00000547862 TEX13AQ9BXU3 409 aaPredicted RBP27.23■■□□□ 1.95
SSH1-207ENST00000547862 KDM2BQ8NHM5 1336 aa27.22■■□□□ 1.95
SSH1-207ENST00000547862 DLG5Q8TDM6 1919 aa27.22■■□□□ 1.95
SSH1-207ENST00000547862 MCM10Q7L590 875 aa27.22■■□□□ 1.95
SSH1-207ENST00000547862 H0YIN7 160 aa27.21■■□□□ 1.95
SSH1-207ENST00000547862 NPHP1O15259 732 aa27.21■■□□□ 1.95
SSH1-207ENST00000547862 TTLL6Q8N841 843 aa27.21■■□□□ 1.95
SSH1-207ENST00000547862 IL6STP40189 918 aaPredicted RBP27.2■■□□□ 1.94
SSH1-207ENST00000547862 RTF1Q92541 710 aaKnown RBP27.2■■□□□ 1.94
SSH1-207ENST00000547862 LAMB4A4D0S4 1761 aa27.2■■□□□ 1.94
SSH1-207ENST00000547862 ZNF622Q969S3 477 aaKnown RBP eCLIP27.19■■□□□ 1.94
SSH1-207ENST00000547862 ZNF219Q9P2Y4 722 aaPredicted RBP27.19■■□□□ 1.94
SSH1-207ENST00000547862 PRAMEF22A3QJZ6 481 aa27.18■■□□□ 1.94
SSH1-207ENST00000547862 APLP1P51693 650 aa27.18■■□□□ 1.94
SSH1-207ENST00000547862 DCTN1Q14203 1278 aa27.18■■□□□ 1.94
SSH1-207ENST00000547862 RRAGCQ9HB90 399 aa27.18■■□□□ 1.94
SSH1-207ENST00000547862 PRR5LQ6MZQ0 368 aa27.17■■□□□ 1.94
SSH1-207ENST00000547862 DZIP3Q86Y13 1208 aaKnown RBP27.16■■□□□ 1.94
SSH1-207ENST00000547862 ARFGEF2Q9Y6D5 1785 aa27.16■■□□□ 1.94
SSH1-207ENST00000547862 FER1L6Q2WGJ9 1857 aa27.15■■□□□ 1.94
SSH1-207ENST00000547862 CAMTA2O94983 1202 aa27.15■■□□□ 1.94
SSH1-207ENST00000547862 PRELPP51888 382 aa27.15■■□□□ 1.94
SSH1-207ENST00000547862 RBM46Q8TBY0 533 aaKnown RBP27.15■■□□□ 1.94
SSH1-207ENST00000547862 USP16Q9Y5T5 823 aa27.15■■□□□ 1.94
SSH1-207ENST00000547862 LMNB1P20700 586 aa27.14■■□□□ 1.94
SSH1-207ENST00000547862 CNBD1Q8NA66 436 aa27.14■■□□□ 1.94
SSH1-207ENST00000547862 DICER1Q9UPY3 1922 aaKnown RBP27.14■■□□□ 1.93
SSH1-207ENST00000547862 PDE6BP35913 854 aa27.13■■□□□ 1.93
SSH1-207ENST00000547862 SETDB2Q96T68 719 aa27.13■■□□□ 1.93
SSH1-207ENST00000547862 SLX4Q8IY92 1834 aa27.13■■□□□ 1.93
SSH1-207ENST00000547862 NFKBIEO00221 500 aa27.12■■□□□ 1.93
SSH1-207ENST00000547862 KDM3BQ7LBC6 1761 aa27.12■■□□□ 1.93
SSH1-207ENST00000547862 ST5P78524 1137 aa27.11■■□□□ 1.93
SSH1-207ENST00000547862 HTRA3P83110 453 aa27.11■■□□□ 1.93
SSH1-207ENST00000547862 BRIP1Q9BX63 1249 aa27.11■■□□□ 1.93
SSH1-207ENST00000547862 C21orf2O43822 256 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms