RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 TAF1LQ8IZX4 1826 aa17.42■□□□□ 0.38
C12orf49-202ENST00000547606 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
C12orf49-202ENST00000547606 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
C12orf49-202ENST00000547606 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
C12orf49-202ENST00000547606 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
C12orf49-202ENST00000547606 TJP1Q07157 1748 aa17.41■□□□□ 0.38
C12orf49-202ENST00000547606 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
C12orf49-202ENST00000547606 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
C12orf49-202ENST00000547606 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
C12orf49-202ENST00000547606 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
C12orf49-202ENST00000547606 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
C12orf49-202ENST00000547606 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
C12orf49-202ENST00000547606 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
C12orf49-202ENST00000547606 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
C12orf49-202ENST00000547606 GNPATO15228 680 aa17.39■□□□□ 0.37
C12orf49-202ENST00000547606 PHF14O94880 888 aa17.39■□□□□ 0.37
C12orf49-202ENST00000547606 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
C12orf49-202ENST00000547606 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
C12orf49-202ENST00000547606 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
C12orf49-202ENST00000547606 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
C12orf49-202ENST00000547606 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
C12orf49-202ENST00000547606 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
C12orf49-202ENST00000547606 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
C12orf49-202ENST00000547606 CD2APQ9Y5K6 639 aa17.37■□□□□ 0.37
C12orf49-202ENST00000547606 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
C12orf49-202ENST00000547606 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
C12orf49-202ENST00000547606 CNTNAP4Q9C0A0 1308 aa17.36■□□□□ 0.37
C12orf49-202ENST00000547606 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
C12orf49-202ENST00000547606 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
C12orf49-202ENST00000547606 CYP19A1P11511 503 aaPredicted RBP17.35■□□□□ 0.37
C12orf49-202ENST00000547606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
C12orf49-202ENST00000547606 STARD3NLO95772 234 aa17.34■□□□□ 0.37
C12orf49-202ENST00000547606 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
C12orf49-202ENST00000547606 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
C12orf49-202ENST00000547606 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
C12orf49-202ENST00000547606 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
C12orf49-202ENST00000547606 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.36
C12orf49-202ENST00000547606 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
C12orf49-202ENST00000547606 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
C12orf49-202ENST00000547606 TNS4Q8IZW8 715 aa17.33■□□□□ 0.36
C12orf49-202ENST00000547606 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
C12orf49-202ENST00000547606 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.36
C12orf49-202ENST00000547606 N4BP2Q86UW6 1770 aaPredicted RBP17.33■□□□□ 0.36
C12orf49-202ENST00000547606 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
C12orf49-202ENST00000547606 SSFA2P28290 1259 aa17.32■□□□□ 0.36
C12orf49-202ENST00000547606 PRELPP51888 382 aa17.32■□□□□ 0.36
C12orf49-202ENST00000547606 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
C12orf49-202ENST00000547606 FLAD1Q8NFF5 587 aa17.32■□□□□ 0.36
C12orf49-202ENST00000547606 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
C12orf49-202ENST00000547606 CHL1O00533 1208 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 TOMM70O94826 608 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 HTRA3P83110 453 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 CCDC27Q2M243 656 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 TRAPPC3LQ5T215 181 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 PCNTO95613 3336 aa17.31■□□□□ 0.36
C12orf49-202ENST00000547606 MYH14Q7Z406 1995 aaKnown RBP17.3■□□□□ 0.36
C12orf49-202ENST00000547606 A1BGP04217 495 aa17.3■□□□□ 0.36
C12orf49-202ENST00000547606 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
C12orf49-202ENST00000547606 IFT57Q9NWB7 429 aa17.3■□□□□ 0.36
C12orf49-202ENST00000547606 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
C12orf49-202ENST00000547606 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
C12orf49-202ENST00000547606 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
C12orf49-202ENST00000547606 GNAI1P63096 354 aa17.29■□□□□ 0.36
C12orf49-202ENST00000547606 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
C12orf49-202ENST00000547606 MBIPQ9NS73 344 aa17.29■□□□□ 0.36
C12orf49-202ENST00000547606 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
C12orf49-202ENST00000547606 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
C12orf49-202ENST00000547606 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
C12orf49-202ENST00000547606 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
C12orf49-202ENST00000547606 KIF13BQ9NQT8 1826 aa17.28■□□□□ 0.36
C12orf49-202ENST00000547606 ADRA2BP18089 450 aa17.27■□□□□ 0.36
C12orf49-202ENST00000547606 RFC4P35249 363 aa17.27■□□□□ 0.36
C12orf49-202ENST00000547606 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
C12orf49-202ENST00000547606 LAMB4A4D0S4 1761 aa17.27■□□□□ 0.35
C12orf49-202ENST00000547606 JMYQ8N9B5 988 aa17.26■□□□□ 0.35
C12orf49-202ENST00000547606 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
C12orf49-202ENST00000547606 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
C12orf49-202ENST00000547606 COL15A1P39059 1388 aa17.26■□□□□ 0.35
C12orf49-202ENST00000547606 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
C12orf49-202ENST00000547606 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
C12orf49-202ENST00000547606 NECTIN2Q92692 538 aa17.25■□□□□ 0.35
C12orf49-202ENST00000547606 SRP68Q9UHB9 627 aaKnown RBP17.25■□□□□ 0.35
C12orf49-202ENST00000547606 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
C12orf49-202ENST00000547606 IL16Q14005 1332 aa17.24■□□□□ 0.35
C12orf49-202ENST00000547606 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
C12orf49-202ENST00000547606 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
C12orf49-202ENST00000547606 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
C12orf49-202ENST00000547606 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
C12orf49-202ENST00000547606 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
C12orf49-202ENST00000547606 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
C12orf49-202ENST00000547606 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
C12orf49-202ENST00000547606 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
C12orf49-202ENST00000547606 A0A087WZG4 1122 aa17.22■□□□□ 0.35
C12orf49-202ENST00000547606 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
C12orf49-202ENST00000547606 ZPR1O75312 459 aa17.22■□□□□ 0.35
C12orf49-202ENST00000547606 MYL6BP14649 208 aa17.22■□□□□ 0.35
C12orf49-202ENST00000547606 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms