RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	ABCC11	Q96J66	1382 aa		9.17	□□□□□ -0.94
TAF1D-222	ENST00000546088	IQSEC2	Q5JU85	1478 aa		9.17	□□□□□ -0.94
TAF1D-222	ENST00000546088	PTCH1	Q13635	1447 aa		9.17	□□□□□ -0.94
TAF1D-222	ENST00000546088	KDM4A	O75164	1064 aa		9.17	□□□□□ -0.94
TAF1D-222	ENST00000546088	SLAIN2	Q9P270	581 aa		9.17	□□□□□ -0.94
TAF1D-222	ENST00000546088	KNDC1	Q76NI1	1749 aa		9.16	□□□□□ -0.94
TAF1D-222	ENST00000546088	DDX17	Q92841	729 aa	Known RBP	9.16	□□□□□ -0.94
TAF1D-222	ENST00000546088	WASF2	Q9Y6W5	498 aa		9.16	□□□□□ -0.94
TAF1D-222	ENST00000546088	ADGRL3	Q9HAR2	1447 aa		9.15	□□□□□ -0.94
TAF1D-222	ENST00000546088	ARHGEF28	Q8N1W1	1705 aa	Known RBP	9.15	□□□□□ -0.94
TAF1D-222	ENST00000546088	HSPA1L	P34931	641 aa		9.15	□□□□□ -0.94
TAF1D-222	ENST00000546088	USP46	P62068	366 aa		9.15	□□□□□ -0.94
TAF1D-222	ENST00000546088	SUZ12	Q15022	739 aa	Known RBP	9.15	□□□□□ -0.94
TAF1D-222	ENST00000546088	TECPR2	O15040	1411 aa		9.15	□□□□□ -0.95
TAF1D-222	ENST00000546088	KIAA1210	Q9ULL0	1709 aa		9.15	□□□□□ -0.95
TAF1D-222	ENST00000546088	EHBP1	Q8NDI1	1231 aa		9.14	□□□□□ -0.95
TAF1D-222	ENST00000546088	ORAI2	Q96SN7	254 aa		9.14	□□□□□ -0.95
TAF1D-222	ENST00000546088	CARD11	Q9BXL7	1154 aa		9.14	□□□□□ -0.95
TAF1D-222	ENST00000546088	ROBO1	Q9Y6N7	1651 aa		9.14	□□□□□ -0.95
TAF1D-222	ENST00000546088	CLSPN	Q9HAW4	1339 aa		9.14	□□□□□ -0.95
TAF1D-222	ENST00000546088	JUND	P17535	347 aa		9.14	□□□□□ -0.95
TAF1D-222	ENST00000546088	RGPD8	O14715	1765 aa	Predicted RBP	9.13	□□□□□ -0.95
TAF1D-222	ENST00000546088	MST1R	Q04912	1400 aa		9.13	□□□□□ -0.95
TAF1D-222	ENST00000546088	XPC	Q01831	940 aa	Predicted RBP	9.12	□□□□□ -0.95
TAF1D-222	ENST00000546088	ESCO1	Q5FWF5	840 aa		9.12	□□□□□ -0.95
TAF1D-222	ENST00000546088	AMER1	Q5JTC6	1135 aa	Predicted RBP	9.12	□□□□□ -0.95
TAF1D-222	ENST00000546088	ZFP42	Q96MM3	310 aa		9.12	□□□□□ -0.95
TAF1D-222	ENST00000546088	FAM135B	Q49AJ0	1406 aa		9.12	□□□□□ -0.95
TAF1D-222	ENST00000546088	NCOA3	Q9Y6Q9	1424 aa		9.12	□□□□□ -0.95
TAF1D-222	ENST00000546088	DLC1	Q96QB1	1528 aa		9.11	□□□□□ -0.95
TAF1D-222	ENST00000546088	BRINP3	Q76B58	766 aa		9.11	□□□□□ -0.95
TAF1D-222	ENST00000546088	HLA-C	Q95604	372 aa		9.11	□□□□□ -0.95
TAF1D-222	ENST00000546088	PMFBP1	Q8TBY8	1022 aa		9.11	□□□□□ -0.95
TAF1D-222	ENST00000546088	C1orf167	Q5SNV9	1468 aa		9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	RALGAPB	Q86X10	1494 aa		9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	QRICH2	Q9H0J4	1663 aa		9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	HOXA2	O43364	376 aa		9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	VSIG8	P0DPA2	414 aa		9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	PTCRA	Q6ISU1	281 aa	Predicted RBP	9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	SIRT1	Q96EB6	747 aa		9.1	□□□□□ -0.95
TAF1D-222	ENST00000546088	WASL	O00401	505 aa	Predicted RBP	9.09	□□□□□ -0.95
TAF1D-222	ENST00000546088	NUDT12	Q9BQG2	462 aa		9.09	□□□□□ -0.95
TAF1D-222	ENST00000546088	CDK19	Q9BWU1	502 aa		9.09	□□□□□ -0.95
TAF1D-222	ENST00000546088	FMN2	Q9NZ56	1722 aa		9.09	□□□□□ -0.95
TAF1D-222	ENST00000546088	CDC42BPG	Q6DT37	1551 aa		9.09	□□□□□ -0.95
TAF1D-222	ENST00000546088	DCC	P43146	1447 aa		9.09	□□□□□ -0.95
TAF1D-222	ENST00000546088	PHLPP1	O60346	1717 aa		9.09	□□□□□ -0.96
TAF1D-222	ENST00000546088	FOXO3	O43524	673 aa		9.08	□□□□□ -0.96
TAF1D-222	ENST00000546088	SRPK2	P78362	688 aa	Known RBP	9.08	□□□□□ -0.96
TAF1D-222	ENST00000546088	KCNMA1	Q12791	1236 aa		9.08	□□□□□ -0.96
TAF1D-222	ENST00000546088	PRR36	Q9H6K5	1346 aa		9.08	□□□□□ -0.96
TAF1D-222	ENST00000546088	ST20-MTHFS	A0A0A6YYL1	179 aa		9.08	□□□□□ -0.96
TAF1D-222	ENST00000546088	USP32	Q8NFA0	1604 aa		9.07	□□□□□ -0.96
TAF1D-222	ENST00000546088	SH3BP2	P78314	561 aa		9.07	□□□□□ -0.96
TAF1D-222	ENST00000546088	TIMELESS	Q9UNS1	1208 aa		9.07	□□□□□ -0.96
TAF1D-222	ENST00000546088	GPRASP1	Q5JY77	1395 aa		9.07	□□□□□ -0.96
TAF1D-222	ENST00000546088	NUDT16	Q96DE0	195 aa	Known RBP	9.06	□□□□□ -0.96
TAF1D-222	ENST00000546088	RETREG3	Q86VR2	466 aa		9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	EIF3A	Q14152	1382 aa	Known RBP	9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	USP47	Q96K76	1375 aa		9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	TULP4	Q9NRJ4	1543 aa		9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	ADGRB2	O60241	1585 aa		9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	MRPL14	Q6P1L8	145 aa	Known RBP	9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	SYMPK	Q92797	1274 aa	Known RBP	9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	POLR3GL	Q9BT43	218 aa		9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	DISP3	Q9P2K9	1392 aa		9.05	□□□□□ -0.96
TAF1D-222	ENST00000546088	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	NUTM2E	B1AL46	878 aa	Predicted RBP	9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	GSK3A	P49840	483 aa		9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	GUCA2A	Q02747	115 aa		9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	SCARF1	Q14162	830 aa		9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	GPIHBP1	Q8IV16	184 aa		9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	MPND	Q8N594	471 aa		9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	NGDN	Q8NEJ9	315 aa	Known RBP	9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	COL16A1	Q07092	1604 aa	Predicted RBP	9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	NHSL1	Q5SYE7	1610 aa		9.04	□□□□□ -0.96
TAF1D-222	ENST00000546088	ATP7B	P35670	1465 aa		9.03	□□□□□ -0.96
TAF1D-222	ENST00000546088	EVC2	Q86UK5	1308 aa		9.03	□□□□□ -0.96
TAF1D-222	ENST00000546088	PSME1	Q06323	249 aa		9.03	□□□□□ -0.96
TAF1D-222	ENST00000546088	KRT28	Q7Z3Y7	464 aa		9.03	□□□□□ -0.96
TAF1D-222	ENST00000546088	PLEKHG3	A1L390	1219 aa		9.02	□□□□□ -0.96
TAF1D-222	ENST00000546088	HSPA5	P11021	654 aa	Known RBP	9.02	□□□□□ -0.96
TAF1D-222	ENST00000546088	KCTD17	Q8N5Z5	321 aa		9.02	□□□□□ -0.96
TAF1D-222	ENST00000546088	TMC1	Q8TDI8	760 aa		9.02	□□□□□ -0.96
TAF1D-222	ENST00000546088	CABP1	Q9NZU7	370 aa		9.02	□□□□□ -0.96
TAF1D-222	ENST00000546088	AHDC1	Q5TGY3	1603 aa	Predicted RBP	9.02	□□□□□ -0.96
TAF1D-222	ENST00000546088	SOCS7	O14512	581 aa		9.02	□□□□□ -0.97
TAF1D-222	ENST00000546088	NUTM2G	Q5VZR2	741 aa		9.02	□□□□□ -0.97
TAF1D-222	ENST00000546088	TESK2	Q96S53	571 aa		9.02	□□□□□ -0.97
TAF1D-222	ENST00000546088	PPIP5K1	Q6PFW1	1433 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	ACE	P12821	1306 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	NPHP3	Q7Z494	1330 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	CCNYL3	P0C7X3	344 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	NNT	Q13423	1086 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	ILDR2	Q71H61	639 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	TLL2	Q9Y6L7	1015 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	ANKAR	Q7Z5J8	1434 aa		9.01	□□□□□ -0.97
TAF1D-222	ENST00000546088	EIF4G2	P78344	907 aa	Known RBP eCLIP	9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms