RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
PAAF1-216ENST00000546039 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
PAAF1-216ENST00000546039 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
PAAF1-216ENST00000546039 BCORQ6W2J9 1755 aa13.89□□□□□ -0.19
PAAF1-216ENST00000546039 STARD3NLO95772 234 aa13.89□□□□□ -0.19
PAAF1-216ENST00000546039 PROM2Q8N271 834 aa13.89□□□□□ -0.19
PAAF1-216ENST00000546039 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
PAAF1-216ENST00000546039 ERBB4Q15303 1308 aa13.89□□□□□ -0.19
PAAF1-216ENST00000546039 CNTNAP4Q9C0A0 1308 aa13.89□□□□□ -0.19
PAAF1-216ENST00000546039 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
PAAF1-216ENST00000546039 CYP19A1P11511 503 aaPredicted RBP13.88□□□□□ -0.19
PAAF1-216ENST00000546039 TSPYL6Q8N831 410 aa13.88□□□□□ -0.19
PAAF1-216ENST00000546039 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
PAAF1-216ENST00000546039 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
PAAF1-216ENST00000546039 ANKRD36CQ5JPF3 1778 aa13.87□□□□□ -0.19
PAAF1-216ENST00000546039 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
PAAF1-216ENST00000546039 KCNQ4P56696 695 aa13.87□□□□□ -0.19
PAAF1-216ENST00000546039 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
PAAF1-216ENST00000546039 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
PAAF1-216ENST00000546039 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
PAAF1-216ENST00000546039 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
PAAF1-216ENST00000546039 NUP98P52948 1817 aa13.87□□□□□ -0.19
PAAF1-216ENST00000546039 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
PAAF1-216ENST00000546039 VAMP4O75379 141 aa13.86□□□□□ -0.19
PAAF1-216ENST00000546039 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
PAAF1-216ENST00000546039 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
PAAF1-216ENST00000546039 CCDC30Q5VVM6 783 aa13.86□□□□□ -0.19
PAAF1-216ENST00000546039 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
PAAF1-216ENST00000546039 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
PAAF1-216ENST00000546039 AK7Q96M32 723 aa13.84□□□□□ -0.19
PAAF1-216ENST00000546039 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
PAAF1-216ENST00000546039 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
PAAF1-216ENST00000546039 A1BGP04217 495 aa13.83□□□□□ -0.2
PAAF1-216ENST00000546039 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
PAAF1-216ENST00000546039 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
PAAF1-216ENST00000546039 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
PAAF1-216ENST00000546039 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
PAAF1-216ENST00000546039 DBF4Q9UBU7 674 aaPredicted RBP13.83□□□□□ -0.2
PAAF1-216ENST00000546039 ZBTB1Q9Y2K1 713 aa13.83□□□□□ -0.2
PAAF1-216ENST00000546039 CASZ1Q86V15 1759 aa13.83□□□□□ -0.2
PAAF1-216ENST00000546039 GNPATO15228 680 aa13.82□□□□□ -0.2
PAAF1-216ENST00000546039 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
PAAF1-216ENST00000546039 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
PAAF1-216ENST00000546039 ANO8Q9HCE9 1232 aaPredicted RBP13.82□□□□□ -0.2
PAAF1-216ENST00000546039 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
PAAF1-216ENST00000546039 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
PAAF1-216ENST00000546039 COL15A1P39059 1388 aa13.82□□□□□ -0.2
PAAF1-216ENST00000546039 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 ADRA2BP18089 450 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
PAAF1-216ENST00000546039 ZNF827Q17R98 1081 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 NBPF14Q5TI25 921 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
PAAF1-216ENST00000546039 NBPF15Q8N660 670 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 HYPKQ9NX55 129 aa13.81□□□□□ -0.2
PAAF1-216ENST00000546039 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
PAAF1-216ENST00000546039 SSFA2P28290 1259 aa13.8□□□□□ -0.2
PAAF1-216ENST00000546039 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
PAAF1-216ENST00000546039 PDIA6Q15084 440 aa13.8□□□□□ -0.2
PAAF1-216ENST00000546039 SLC15A2Q16348 729 aa13.8□□□□□ -0.2
PAAF1-216ENST00000546039 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
PAAF1-216ENST00000546039 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 A0A087WZG4 1122 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 MYL6BP14649 208 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-216ENST00000546039 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
PAAF1-216ENST00000546039 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 TFCP2L1Q9NZI6 479 aa13.79□□□□□ -0.2
PAAF1-216ENST00000546039 TCERG1O14776 1098 aaKnown RBP13.78□□□□□ -0.2
PAAF1-216ENST00000546039 ANXA1P04083 346 aa13.78□□□□□ -0.2
PAAF1-216ENST00000546039 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
PAAF1-216ENST00000546039 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
PAAF1-216ENST00000546039 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
PAAF1-216ENST00000546039 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
PAAF1-216ENST00000546039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
PAAF1-216ENST00000546039 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
PAAF1-216ENST00000546039 MRPL50Q8N5N7 158 aaKnown RBP13.77□□□□□ -0.21
PAAF1-216ENST00000546039 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
PAAF1-216ENST00000546039 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 PHF14O94880 888 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 FLIIQ13045 1269 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 TRAPPC3LQ5T215 181 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 KIF6Q6ZMV9 814 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 XAGE3Q8WTP9 111 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 BCL2L13Q9BXK5 485 aa13.76□□□□□ -0.21
PAAF1-216ENST00000546039 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
PAAF1-216ENST00000546039 PTPRCP08575 1304 aa13.75□□□□□ -0.21
PAAF1-216ENST00000546039 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
PAAF1-216ENST00000546039 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
PAAF1-216ENST00000546039 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
PAAF1-216ENST00000546039 MAP3K15Q6ZN16 1313 aa13.74□□□□□ -0.21
PAAF1-216ENST00000546039 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
PAAF1-216ENST00000546039 RGL2O15211 777 aa13.74□□□□□ -0.21
PAAF1-216ENST00000546039 RFC4P35249 363 aa13.74□□□□□ -0.21
PAAF1-216ENST00000546039 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms