RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 CCDC186Q7Z3E2 898 aa9.5□□□□□ -0.89
DDX47-212ENST00000545038 MTMR6Q9Y217 621 aa9.5□□□□□ -0.89
DDX47-212ENST00000545038 MRVI1Q9Y6F6 885 aa9.5□□□□□ -0.89
DDX47-212ENST00000545038 VGLL3A8MV65 326 aa9.5□□□□□ -0.89
DDX47-212ENST00000545038 MAP4K4O95819 1239 aaPredicted RBP9.5□□□□□ -0.89
DDX47-212ENST00000545038 CHAF1AQ13111 956 aaPredicted RBP9.5□□□□□ -0.89
DDX47-212ENST00000545038 LRRCC1Q9C099 1032 aa9.5□□□□□ -0.89
DDX47-212ENST00000545038 HMMRO75330 724 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 LIG1P18858 919 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 LMOD3Q0VAK6 560 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 FAM173BQ6P4H8 233 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 KIF18AQ8NI77 898 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 ST7Q9NRC1 585 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 STAP2Q9UGK3 403 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
DDX47-212ENST00000545038 CPS1P31327 1500 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 CAMK4Q16566 473 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 CHMP3Q9Y3E7 222 aa9.49□□□□□ -0.89
DDX47-212ENST00000545038 ERBB3P21860 1342 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 RAD50Q92878 1312 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 USP27XA6NNY8 438 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 SMTNL1A8MU46 457 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 TERF2Q15554 542 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 WAPLQ7Z5K2 1190 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 CCDC144CPQ8IYA2 1237 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
DDX47-212ENST00000545038 IL1RAPL2Q9NP60 686 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 ATP7BP35670 1465 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 TNNT1P13805 278 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 GABPB1Q06547 395 aaPredicted RBP9.48□□□□□ -0.89
DDX47-212ENST00000545038 SYCP1Q15431 976 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 LSG1Q9H089 658 aaKnown RBP9.48□□□□□ -0.89
DDX47-212ENST00000545038 CBX8Q9HC52 389 aa9.48□□□□□ -0.89
DDX47-212ENST00000545038 CRB1P82279 1406 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 SGSM2O43147 1006 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 GNAI2P04899 355 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 GJB2P29033 226 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 IRX5P78411 483 aaPredicted RBP9.47□□□□□ -0.89
DDX47-212ENST00000545038 TYRO3Q06418 890 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 ARID5BQ14865 1188 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 ADCK5Q3MIX3 580 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 CKAP2LQ8IYA6 745 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 HYPKQ9NX55 129 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 FAM53CQ9NYF3 392 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.47□□□□□ -0.89
DDX47-212ENST00000545038 LIMCH1Q9UPQ0 1083 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 V9GYY5 206 aaPredicted RBP9.47□□□□□ -0.89
DDX47-212ENST00000545038 TMEM131LA2VDJ0 1609 aa9.47□□□□□ -0.89
DDX47-212ENST00000545038 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
DDX47-212ENST00000545038 TPM3P06753 285 aa9.46□□□□□ -0.89
DDX47-212ENST00000545038 CCDC192P0DO97 292 aa9.46□□□□□ -0.89
DDX47-212ENST00000545038 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.89
DDX47-212ENST00000545038 SULT6B1Q6IMI4 303 aa9.46□□□□□ -0.89
DDX47-212ENST00000545038 PLA2G4DQ86XP0 818 aa9.46□□□□□ -0.89
DDX47-212ENST00000545038 PI4K2BQ8TCG2 481 aa9.46□□□□□ -0.89
DDX47-212ENST00000545038 ALKQ9UM73 1620 aa9.46□□□□□ -0.89
DDX47-212ENST00000545038 FOXO3O43524 673 aa9.46□□□□□ -0.9
DDX47-212ENST00000545038 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
DDX47-212ENST00000545038 DDX54Q8TDD1 881 aaKnown RBP9.46□□□□□ -0.9
DDX47-212ENST00000545038 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
DDX47-212ENST00000545038 SMC3Q9UQE7 1217 aa9.46□□□□□ -0.9
DDX47-212ENST00000545038 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.9
DDX47-212ENST00000545038 RIMS1Q86UR5 1692 aaKnown RBP9.46□□□□□ -0.9
DDX47-212ENST00000545038 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 RTF1Q92541 710 aaKnown RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 ZNF215Q9UL58 517 aaPredicted RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 GOLGA6L6A8MZA4 724 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 CASTP20810 708 aaKnown RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 CCT4P50991 539 aaKnown RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 ZNF75DP51815 510 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 FERMT3Q86UX7 667 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 NECAB1Q8N987 351 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 ZNF446Q9NWS9 450 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
DDX47-212ENST00000545038 NRKQ7Z2Y5 1582 aa9.45□□□□□ -0.9
DDX47-212ENST00000545038 CRYBG1Q9Y4K1 1723 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 EDC4Q6P2E9 1401 aaKnown RBP9.44□□□□□ -0.9
DDX47-212ENST00000545038 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
DDX47-212ENST00000545038 KCNJ4P48050 445 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 PDE4CQ08493 712 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 ME3Q16798 604 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 CCDC112Q8NEF3 446 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 DACT1Q9NYF0 836 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.44□□□□□ -0.9
DDX47-212ENST00000545038 CAPN2P17655 700 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 PTH1RQ03431 593 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 MAP3K11Q16584 847 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms