RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 CHRNA5P30532 468 aa37.01■■■■□ 3.52
PDCD2-211ENST00000544336 TTC5Q8N0Z6 440 aa37■■■■□ 3.51
PDCD2-211ENST00000544336 AFDNP55196 1824 aaKnown RBP36.99■■■■□ 3.51
PDCD2-211ENST00000544336 KIF3CO14782 793 aa36.99■■■■□ 3.51
PDCD2-211ENST00000544336 NARFQ9UHQ1 456 aa36.99■■■■□ 3.51
PDCD2-211ENST00000544336 CANXP27824 592 aaKnown RBP36.98■■■■□ 3.51
PDCD2-211ENST00000544336 DALRD3Q5D0E6 543 aaKnown RBP36.98■■■■□ 3.51
PDCD2-211ENST00000544336 VSIG10Q8N0Z9 540 aa36.98■■■■□ 3.51
PDCD2-211ENST00000544336 GNAT3A8MTJ3 354 aa36.97■■■■□ 3.51
PDCD2-211ENST00000544336 TEFQ10587 303 aa36.97■■■■□ 3.51
PDCD2-211ENST00000544336 GAS2L2Q8NHY3 880 aa36.97■■■■□ 3.51
PDCD2-211ENST00000544336 CEP350Q5VT06 3117 aa36.96■■■■□ 3.51
PDCD2-211ENST00000544336 NFIXQ14938 502 aa36.96■■■■□ 3.51
PDCD2-211ENST00000544336 IL17REQ8NFR9 667 aa36.95■■■■□ 3.51
PDCD2-211ENST00000544336 SIPA1L3O60292 1781 aaPredicted RBP36.95■■■■□ 3.51
PDCD2-211ENST00000544336 HSPA6P17066 643 aa36.94■■■■□ 3.5
PDCD2-211ENST00000544336 C9orf131Q5VYM1 1079 aa36.93■■■■□ 3.5
PDCD2-211ENST00000544336 ZNF496Q96IT1 587 aaPredicted RBP36.92■■■■□ 3.5
PDCD2-211ENST00000544336 BCL2L12Q9HB09 334 aa36.92■■■■□ 3.5
PDCD2-211ENST00000544336 STARD3NLO95772 234 aa36.91■■■■□ 3.5
PDCD2-211ENST00000544336 NRXN2Q9P2S2 1712 aa36.9■■■■□ 3.5
PDCD2-211ENST00000544336 CFAP53Q96M91 514 aa36.9■■■■□ 3.5
PDCD2-211ENST00000544336 ZNF790Q6PG37 636 aa36.89■■■■□ 3.5
PDCD2-211ENST00000544336 SERPINB2P05120 415 aa36.88■■■■□ 3.49
PDCD2-211ENST00000544336 PRKAR2BP31323 418 aa36.88■■■■□ 3.49
PDCD2-211ENST00000544336 PHACTR3Q96KR7 559 aa36.88■■■■□ 3.49
PDCD2-211ENST00000544336 HEG1Q9ULI3 1381 aa36.88■■■■□ 3.49
PDCD2-211ENST00000544336 BICDL1Q6ZP65 573 aa36.87■■■■□ 3.49
PDCD2-211ENST00000544336 NMRK2Q9NPI5 230 aa36.87■■■■□ 3.49
PDCD2-211ENST00000544336 ZNF330Q9Y3S2 320 aaPredicted RBP36.87■■■■□ 3.49
PDCD2-211ENST00000544336 EIF5P55010 431 aaKnown RBP36.85■■■■□ 3.49
PDCD2-211ENST00000544336 RSPH6AQ9H0K4 717 aa36.85■■■■□ 3.49
PDCD2-211ENST00000544336 RNF181Q9P0P0 153 aa36.85■■■■□ 3.49
PDCD2-211ENST00000544336 SBF1O95248 1867 aa36.83■■■■□ 3.49
PDCD2-211ENST00000544336 DLEC1Q9Y238 1755 aa36.83■■■■□ 3.49
PDCD2-211ENST00000544336 A0A087WZG4 1122 aa36.82■■■■□ 3.48
PDCD2-211ENST00000544336 FMNL2Q96PY5 1086 aa36.81■■■■□ 3.48
PDCD2-211ENST00000544336 TEX13AQ9BXU3 409 aaPredicted RBP36.81■■■■□ 3.48
PDCD2-211ENST00000544336 NUDCQ9Y266 331 aa36.81■■■■□ 3.48
PDCD2-211ENST00000544336 SCN7AQ01118 1682 aa36.8■■■■□ 3.48
PDCD2-211ENST00000544336 CARMIL3Q8ND23 1372 aa36.8■■■■□ 3.48
PDCD2-211ENST00000544336 CEMIPQ8WUJ3 1361 aa36.8■■■■□ 3.48
PDCD2-211ENST00000544336 KCNQ3O43525 872 aa36.8■■■■□ 3.48
PDCD2-211ENST00000544336 TBC1D2BQ9UPU7 963 aa36.8■■■■□ 3.48
PDCD2-211ENST00000544336 TOMM70O94826 608 aa36.79■■■■□ 3.48
PDCD2-211ENST00000544336 PPP2R1AP30153 589 aa36.79■■■■□ 3.48
PDCD2-211ENST00000544336 BTBD11A6QL63 1104 aa36.78■■■■□ 3.48
PDCD2-211ENST00000544336 U2AF1L5P0DN76 240 aaPredicted RBP36.78■■■■□ 3.48
PDCD2-211ENST00000544336 U2AF1Q01081 240 aaKnown RBP eCLIP36.78■■■■□ 3.48
PDCD2-211ENST00000544336 TBC1D9BQ66K14 1250 aa36.78■■■■□ 3.48
PDCD2-211ENST00000544336 C2CD5Q86YS7 1000 aa36.78■■■■□ 3.48
PDCD2-211ENST00000544336 RASSF7Q02833 373 aa36.77■■■■□ 3.48
PDCD2-211ENST00000544336 A1BGP04217 495 aa36.76■■■■□ 3.48
PDCD2-211ENST00000544336 IL6STP40189 918 aaPredicted RBP36.74■■■■□ 3.47
PDCD2-211ENST00000544336 ANKRD31Q8N7Z5 1873 aa36.73■■■■□ 3.47
PDCD2-211ENST00000544336 H0YIN7 160 aa36.73■■■■□ 3.47
PDCD2-211ENST00000544336 NPM2Q86SE8 214 aaKnown RBP36.73■■■■□ 3.47
PDCD2-211ENST00000544336 TTLL6Q8N841 843 aa36.73■■■■□ 3.47
PDCD2-211ENST00000544336 MCM10Q7L590 875 aa36.72■■■■□ 3.47
PDCD2-211ENST00000544336 C16orf71Q8IYS4 520 aaPredicted RBP36.72■■■■□ 3.47
PDCD2-211ENST00000544336 CCDC24Q8N4L8 307 aa36.72■■■■□ 3.47
PDCD2-211ENST00000544336 KDM2BQ8NHM5 1336 aa36.72■■■■□ 3.47
PDCD2-211ENST00000544336 RTF1Q92541 710 aaKnown RBP36.71■■■■□ 3.47
PDCD2-211ENST00000544336 PIP4K2AP48426 406 aaPredicted RBP36.69■■■■□ 3.46
PDCD2-211ENST00000544336 APLP1P51693 650 aa36.68■■■■□ 3.46
PDCD2-211ENST00000544336 RRAGCQ9HB90 399 aa36.68■■■■□ 3.46
PDCD2-211ENST00000544336 CCDC88AQ3V6T2 1871 aa36.68■■■■□ 3.46
PDCD2-211ENST00000544336 TNRC6CQ9HCJ0 1690 aaKnown RBP36.67■■■■□ 3.46
PDCD2-211ENST00000544336 PRAMEF22A3QJZ6 481 aa36.67■■■■□ 3.46
PDCD2-211ENST00000544336 DCTN1Q14203 1278 aa36.67■■■■□ 3.46
PDCD2-211ENST00000544336 USP16Q9Y5T5 823 aa36.67■■■■□ 3.46
PDCD2-211ENST00000544336 BCORQ6W2J9 1755 aa36.67■■■■□ 3.46
PDCD2-211ENST00000544336 COL11A2P13942 1736 aaPredicted RBP36.66■■■■□ 3.46
PDCD2-211ENST00000544336 CAMTA2O94983 1202 aa36.66■■■■□ 3.46
PDCD2-211ENST00000544336 PRR5LQ6MZQ0 368 aa36.66■■■■□ 3.46
PDCD2-211ENST00000544336 ZNF622Q969S3 477 aaKnown RBP eCLIP36.66■■■■□ 3.46
PDCD2-211ENST00000544336 RBM46Q8TBY0 533 aaKnown RBP36.65■■■■□ 3.46
PDCD2-211ENST00000544336 LMNB1P20700 586 aa36.64■■■■□ 3.46
PDCD2-211ENST00000544336 PRELPP51888 382 aa36.64■■■■□ 3.46
PDCD2-211ENST00000544336 DZIP3Q86Y13 1208 aaKnown RBP36.64■■■■□ 3.46
PDCD2-211ENST00000544336 TIAM2Q8IVF5 1701 aa36.63■■■■□ 3.45
PDCD2-211ENST00000544336 NPHP1O15259 732 aa36.63■■■■□ 3.45
PDCD2-211ENST00000544336 SETDB2Q96T68 719 aa36.63■■■■□ 3.45
PDCD2-211ENST00000544336 BRIP1Q9BX63 1249 aa36.63■■■■□ 3.45
PDCD2-211ENST00000544336 ZNF219Q9P2Y4 722 aaPredicted RBP36.63■■■■□ 3.45
PDCD2-211ENST00000544336 PDE6BP35913 854 aa36.62■■■■□ 3.45
PDCD2-211ENST00000544336 SNRPA1P09661 255 aaKnown RBP36.6■■■■□ 3.45
PDCD2-211ENST00000544336 CNBD1Q8NA66 436 aa36.6■■■■□ 3.45
PDCD2-211ENST00000544336 CACNA1SQ13698 1873 aa36.6■■■■□ 3.45
PDCD2-211ENST00000544336 NFKBIEO00221 500 aa36.59■■■■□ 3.45
PDCD2-211ENST00000544336 WDR90Q96KV7 1748 aa36.59■■■■□ 3.45
PDCD2-211ENST00000544336 ZC3H4Q9UPT8 1303 aaKnown RBP36.58■■■■□ 3.45
PDCD2-211ENST00000544336 C21orf2O43822 256 aa36.57■■■■□ 3.44
PDCD2-211ENST00000544336 PDZRN3Q9UPQ7 1066 aa36.57■■■■□ 3.44
PDCD2-211ENST00000544336 ST5P78524 1137 aa36.56■■■■□ 3.44
PDCD2-211ENST00000544336 DLG5Q8TDM6 1919 aa36.55■■■■□ 3.44
PDCD2-211ENST00000544336 HTATSF1O43719 755 aaKnown RBP36.55■■■■□ 3.44
PDCD2-211ENST00000544336 MIS18AQ9NYP9 233 aa36.54■■■■□ 3.44
PDCD2-211ENST00000544336 FSTL1Q12841 308 aa36.53■■■■□ 3.44
PDCD2-211ENST00000544336 HTRA3P83110 453 aa36.52■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms