RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
LSM14A-203ENST00000544216 PKP1Q13835 747 aa16.95■□□□□ 0.3
LSM14A-203ENST00000544216 PANK2Q9BZ23 570 aa16.95■□□□□ 0.3
LSM14A-203ENST00000544216 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
LSM14A-203ENST00000544216 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
LSM14A-203ENST00000544216 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
LSM14A-203ENST00000544216 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
LSM14A-203ENST00000544216 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
LSM14A-203ENST00000544216 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
LSM14A-203ENST00000544216 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
LSM14A-203ENST00000544216 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
LSM14A-203ENST00000544216 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
LSM14A-203ENST00000544216 HOXB7P09629 217 aa16.93■□□□□ 0.3
LSM14A-203ENST00000544216 RAB11FIP3O75154 756 aa16.93■□□□□ 0.3
LSM14A-203ENST00000544216 LTN1O94822 1766 aa16.92■□□□□ 0.3
LSM14A-203ENST00000544216 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
LSM14A-203ENST00000544216 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
LSM14A-203ENST00000544216 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
LSM14A-203ENST00000544216 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
LSM14A-203ENST00000544216 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
LSM14A-203ENST00000544216 NUCB2P80303 420 aa16.92■□□□□ 0.3
LSM14A-203ENST00000544216 NFAT5O94916 1531 aa16.91■□□□□ 0.3
LSM14A-203ENST00000544216 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
LSM14A-203ENST00000544216 STAP2Q9UGK3 403 aa16.91■□□□□ 0.3
LSM14A-203ENST00000544216 PXDNQ92626 1479 aa16.91■□□□□ 0.3
LSM14A-203ENST00000544216 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
LSM14A-203ENST00000544216 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
LSM14A-203ENST00000544216 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
LSM14A-203ENST00000544216 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
LSM14A-203ENST00000544216 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
LSM14A-203ENST00000544216 CHAMP1Q96JM3 812 aa16.9■□□□□ 0.3
LSM14A-203ENST00000544216 SIL1Q9H173 461 aa16.9■□□□□ 0.3
LSM14A-203ENST00000544216 ADCY9O60503 1353 aa16.9■□□□□ 0.3
LSM14A-203ENST00000544216 POLA2Q14181 598 aa16.9■□□□□ 0.3
LSM14A-203ENST00000544216 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
LSM14A-203ENST00000544216 IL25Q9H293 177 aa16.9■□□□□ 0.3
LSM14A-203ENST00000544216 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.3
LSM14A-203ENST00000544216 SKOR2Q2VWA4 1001 aaPredicted RBP16.89■□□□□ 0.3
LSM14A-203ENST00000544216 TMX3Q96JJ7 454 aa16.89■□□□□ 0.3
LSM14A-203ENST00000544216 ERBB3P21860 1342 aa16.89■□□□□ 0.29
LSM14A-203ENST00000544216 DDX58O95786 925 aaKnown RBP16.89■□□□□ 0.29
LSM14A-203ENST00000544216 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
LSM14A-203ENST00000544216 AK9Q5TCS8 1911 aa16.89■□□□□ 0.29
LSM14A-203ENST00000544216 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
LSM14A-203ENST00000544216 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
LSM14A-203ENST00000544216 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
LSM14A-203ENST00000544216 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
LSM14A-203ENST00000544216 CNTROBQ8N137 903 aa16.88■□□□□ 0.29
LSM14A-203ENST00000544216 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
LSM14A-203ENST00000544216 ZNF790Q6PG37 636 aa16.88■□□□□ 0.29
LSM14A-203ENST00000544216 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
LSM14A-203ENST00000544216 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 HSPA2P54652 639 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 TPRNQ4KMQ1 711 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 TTC5Q8N0Z6 440 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 GRPEL1Q9HAV7 217 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 PRPF40AO75400 957 aaKnown RBP16.87■□□□□ 0.29
LSM14A-203ENST00000544216 AACSQ86V21 672 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
LSM14A-203ENST00000544216 MRE11P49959 708 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 PI4K2BQ8TCG2 481 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 LRRC37A3O60309 1634 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.293e-8■■■■■ 29.9
LSM14A-203ENST00000544216 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
LSM14A-203ENST00000544216 FAM208AQ9UK61 1670 aaKnown RBP16.86■□□□□ 0.29
LSM14A-203ENST00000544216 GRM8O00222 908 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 XAGE3Q8WTP9 111 aa16.86■□□□□ 0.29
LSM14A-203ENST00000544216 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
LSM14A-203ENST00000544216 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
LSM14A-203ENST00000544216 TMEM94Q12767 1356 aa16.85■□□□□ 0.29
LSM14A-203ENST00000544216 PTMSP20962 102 aa16.85■□□□□ 0.29
LSM14A-203ENST00000544216 GAS2L3Q86XJ1 694 aa16.85■□□□□ 0.29
LSM14A-203ENST00000544216 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
LSM14A-203ENST00000544216 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
LSM14A-203ENST00000544216 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
LSM14A-203ENST00000544216 BICC1Q9H694 974 aaKnown RBP16.85■□□□□ 0.29
LSM14A-203ENST00000544216 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
LSM14A-203ENST00000544216 MYD88Q99836 296 aa16.84■□□□□ 0.29
LSM14A-203ENST00000544216 SLC52A2Q9HAB3 445 aa16.84■□□□□ 0.29
LSM14A-203ENST00000544216 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
LSM14A-203ENST00000544216 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
LSM14A-203ENST00000544216 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
LSM14A-203ENST00000544216 PXDNLA1KZ92 1463 aa16.84■□□□□ 0.29
LSM14A-203ENST00000544216 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.29
LSM14A-203ENST00000544216 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.29
LSM14A-203ENST00000544216 USP16Q9Y5T5 823 aa16.83■□□□□ 0.29
LSM14A-203ENST00000544216 PHKG2P15735 406 aa16.83■□□□□ 0.28
LSM14A-203ENST00000544216 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
LSM14A-203ENST00000544216 DTNBO60941 627 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 KCNJ4P48050 445 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 ECHDC1Q9NTX5 307 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
LSM14A-203ENST00000544216 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 AOX1Q06278 1338 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms