RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 EP400Q96L91 3159 aa20.38■□□□□ 0.85
XRCC1-202ENST00000543982 C5P01031 1676 aa20.38■□□□□ 0.85
XRCC1-202ENST00000543982 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
XRCC1-202ENST00000543982 DNAJC10Q8IXB1 793 aa20.38■□□□□ 0.85
XRCC1-202ENST00000543982 RGS12O14924 1447 aa20.38■□□□□ 0.85
XRCC1-202ENST00000543982 PDE3AQ14432 1141 aa20.37■□□□□ 0.85
XRCC1-202ENST00000543982 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
XRCC1-202ENST00000543982 A1BGP04217 495 aa20.37■□□□□ 0.85
XRCC1-202ENST00000543982 LRP10Q7Z4F1 713 aa20.37■□□□□ 0.85
XRCC1-202ENST00000543982 DZIP1LQ8IYY4 767 aaKnown RBP20.37■□□□□ 0.85
XRCC1-202ENST00000543982 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
XRCC1-202ENST00000543982 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
XRCC1-202ENST00000543982 F6X3S4 739 aa20.36■□□□□ 0.85
XRCC1-202ENST00000543982 KCNQ4P56696 695 aa20.36■□□□□ 0.85
XRCC1-202ENST00000543982 FLIIQ13045 1269 aa20.36■□□□□ 0.85
XRCC1-202ENST00000543982 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
XRCC1-202ENST00000543982 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
XRCC1-202ENST00000543982 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
XRCC1-202ENST00000543982 TMEM57Q8N5G2 664 aa20.35■□□□□ 0.85
XRCC1-202ENST00000543982 ARHGAP45Q92619 1136 aa20.35■□□□□ 0.85
XRCC1-202ENST00000543982 BRWD3Q6RI45 1802 aa20.35■□□□□ 0.85
XRCC1-202ENST00000543982 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
XRCC1-202ENST00000543982 PPP4R2Q9NY27 417 aa20.35■□□□□ 0.85
XRCC1-202ENST00000543982 MYL6BP14649 208 aa20.34■□□□□ 0.85
XRCC1-202ENST00000543982 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
XRCC1-202ENST00000543982 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
XRCC1-202ENST00000543982 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
XRCC1-202ENST00000543982 ITPK1Q13572 414 aa20.33■□□□□ 0.84
XRCC1-202ENST00000543982 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
XRCC1-202ENST00000543982 SIK1P57059 783 aa20.32■□□□□ 0.84
XRCC1-202ENST00000543982 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
XRCC1-202ENST00000543982 ABCC4O15439 1325 aa20.32■□□□□ 0.84
XRCC1-202ENST00000543982 TRIM37O94972 964 aa20.31■□□□□ 0.84
XRCC1-202ENST00000543982 CYP19A1P11511 503 aaPredicted RBP20.31■□□□□ 0.84
XRCC1-202ENST00000543982 FAM196AQ6ZSG2 479 aa20.31■□□□□ 0.84
XRCC1-202ENST00000543982 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
XRCC1-202ENST00000543982 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
XRCC1-202ENST00000543982 FKBP5Q13451 457 aaPredicted RBP20.3■□□□□ 0.84
XRCC1-202ENST00000543982 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
XRCC1-202ENST00000543982 PTPRCP08575 1304 aa20.3■□□□□ 0.84
XRCC1-202ENST00000543982 MVPQ14764 893 aaKnown RBP20.3■□□□□ 0.84
XRCC1-202ENST00000543982 ATP6V1AP38606 617 aa20.29■□□□□ 0.84
XRCC1-202ENST00000543982 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
XRCC1-202ENST00000543982 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
XRCC1-202ENST00000543982 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
XRCC1-202ENST00000543982 HYPKQ9NX55 129 aa20.28■□□□□ 0.84
XRCC1-202ENST00000543982 ITPRIPQ8IWB1 547 aa20.28■□□□□ 0.84
XRCC1-202ENST00000543982 SMARCC1Q92922 1105 aaPredicted RBP20.28■□□□□ 0.84
XRCC1-202ENST00000543982 ADCY9O60503 1353 aa20.28■□□□□ 0.84
XRCC1-202ENST00000543982 PI4KAP2A4QPH2 592 aa20.27■□□□□ 0.84
XRCC1-202ENST00000543982 PI4KAP1Q8N8J0 262 aa20.27■□□□□ 0.84
XRCC1-202ENST00000543982 NHSQ6T4R5 1651 aa20.27■□□□□ 0.84
XRCC1-202ENST00000543982 SLC4A10Q6U841 1118 aa20.26■□□□□ 0.83
XRCC1-202ENST00000543982 INTS3Q68E01 1043 aaKnown RBP20.26■□□□□ 0.83
XRCC1-202ENST00000543982 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
XRCC1-202ENST00000543982 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
XRCC1-202ENST00000543982 TTLL7Q6ZT98 887 aa20.26■□□□□ 0.83
XRCC1-202ENST00000543982 ZBTB1Q9Y2K1 713 aa20.26■□□□□ 0.83
XRCC1-202ENST00000543982 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
XRCC1-202ENST00000543982 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
XRCC1-202ENST00000543982 TEX13AQ9BXU3 409 aaPredicted RBP20.25■□□□□ 0.83
XRCC1-202ENST00000543982 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
XRCC1-202ENST00000543982 BTAF1O14981 1849 aa20.25■□□□□ 0.83
XRCC1-202ENST00000543982 STARD3NLO95772 234 aa20.25■□□□□ 0.83
XRCC1-202ENST00000543982 ZBTB7BO15156 539 aaPredicted RBP20.24■□□□□ 0.83
XRCC1-202ENST00000543982 MS4A1P11836 297 aa20.24■□□□□ 0.83
XRCC1-202ENST00000543982 SMIM5Q71RC9 77 aa20.24■□□□□ 0.83
XRCC1-202ENST00000543982 TJP1Q07157 1748 aa20.24■□□□□ 0.83
XRCC1-202ENST00000543982 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
XRCC1-202ENST00000543982 MAP3K2Q9Y2U5 619 aa20.23■□□□□ 0.83
XRCC1-202ENST00000543982 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
XRCC1-202ENST00000543982 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
XRCC1-202ENST00000543982 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
XRCC1-202ENST00000543982 LAMB4A4D0S4 1761 aa20.22■□□□□ 0.83
XRCC1-202ENST00000543982 DNAAF4Q8WXU2 420 aa20.22■□□□□ 0.83
XRCC1-202ENST00000543982 PROM2Q8N271 834 aa20.21■□□□□ 0.83
XRCC1-202ENST00000543982 ZBTB40Q9NUA8 1239 aa20.21■□□□□ 0.83
XRCC1-202ENST00000543982 ZNF330Q9Y3S2 320 aaPredicted RBP20.21■□□□□ 0.83
XRCC1-202ENST00000543982 PCDHB15Q9Y5E8 787 aa20.21■□□□□ 0.83
XRCC1-202ENST00000543982 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
XRCC1-202ENST00000543982 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
XRCC1-202ENST00000543982 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
XRCC1-202ENST00000543982 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
XRCC1-202ENST00000543982 MEIS3Q99687 375 aa20.19■□□□□ 0.82
XRCC1-202ENST00000543982 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
XRCC1-202ENST00000543982 DDX19BQ9UMR2 479 aa20.19■□□□□ 0.82
XRCC1-202ENST00000543982 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
XRCC1-202ENST00000543982 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
XRCC1-202ENST00000543982 RIC3Q7Z5B4 369 aa20.18■□□□□ 0.82
XRCC1-202ENST00000543982 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
XRCC1-202ENST00000543982 CWF19L2Q2TBE0 894 aaKnown RBP20.17■□□□□ 0.82
XRCC1-202ENST00000543982 CCDC136Q96JN2 1154 aa20.17■□□□□ 0.82
XRCC1-202ENST00000543982 ZBTB3Q9H5J0 574 aa20.17■□□□□ 0.82
XRCC1-202ENST00000543982 CCT4P50991 539 aaKnown RBP20.17■□□□□ 0.82
XRCC1-202ENST00000543982 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
XRCC1-202ENST00000543982 CACNA1FO60840 1977 aa20.16■□□□□ 0.82
XRCC1-202ENST00000543982 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
XRCC1-202ENST00000543982 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
XRCC1-202ENST00000543982 APBA3O96018 575 aa20.15■□□□□ 0.82
XRCC1-202ENST00000543982 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms