RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 NRXN2Q9P2S2 1712 aa15.34■□□□□ 0.05
C1RL-209ENST00000543941 PARP3Q9Y6F1 533 aa15.33■□□□□ 0.04
C1RL-209ENST00000543941 ARFGEF1Q9Y6D6 1849 aa15.32■□□□□ 0.04
C1RL-209ENST00000543941 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
C1RL-209ENST00000543941 NFIXQ14938 502 aa15.32■□□□□ 0.04
C1RL-209ENST00000543941 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
C1RL-209ENST00000543941 CHRNA5P30532 468 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 NARFQ9UHQ1 456 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 BCS1LQ9Y276 419 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 COL15A1P39059 1388 aa15.31■□□□□ 0.04
C1RL-209ENST00000543941 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
C1RL-209ENST00000543941 EIF5P55010 431 aaKnown RBP15.3■□□□□ 0.04
C1RL-209ENST00000543941 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
C1RL-209ENST00000543941 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
C1RL-209ENST00000543941 ZNF526Q8TF50 670 aaPredicted RBP15.3■□□□□ 0.04
C1RL-209ENST00000543941 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
C1RL-209ENST00000543941 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
C1RL-209ENST00000543941 CARMIL3Q8ND23 1372 aa15.28■□□□□ 0.04
C1RL-209ENST00000543941 A1BGP04217 495 aa15.28■□□□□ 0.04
C1RL-209ENST00000543941 MCM10Q7L590 875 aa15.28■□□□□ 0.04
C1RL-209ENST00000543941 USP16Q9Y5T5 823 aa15.28■□□□□ 0.04
C1RL-209ENST00000543941 ANKRD31Q8N7Z5 1873 aa15.28■□□□□ 0.04
C1RL-209ENST00000543941 SBF1O95248 1867 aa15.27■□□□□ 0.04
C1RL-209ENST00000543941 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
C1RL-209ENST00000543941 ZPR1O75312 459 aa15.27■□□□□ 0.04
C1RL-209ENST00000543941 FCHSD2O94868 740 aa15.27■□□□□ 0.04
C1RL-209ENST00000543941 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
C1RL-209ENST00000543941 PIP4K2AP48426 406 aaPredicted RBP15.27■□□□□ 0.04
C1RL-209ENST00000543941 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
C1RL-209ENST00000543941 TEFQ10587 303 aa15.27■□□□□ 0.04
C1RL-209ENST00000543941 KIF3CO14782 793 aa15.26■□□□□ 0.03
C1RL-209ENST00000543941 PRELPP51888 382 aa15.26■□□□□ 0.03
C1RL-209ENST00000543941 ARHGAP27Q6ZUM4 889 aa15.26■□□□□ 0.03
C1RL-209ENST00000543941 SCN7AQ01118 1682 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 SERPINB2P05120 415 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 TTC5Q8N0Z6 440 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 TBC1D2BQ9UPU7 963 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 DLEC1Q9Y238 1755 aa15.25■□□□□ 0.03
C1RL-209ENST00000543941 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
C1RL-209ENST00000543941 BICDL1Q6ZP65 573 aa15.24■□□□□ 0.03
C1RL-209ENST00000543941 CCDC24Q8N4L8 307 aa15.24■□□□□ 0.03
C1RL-209ENST00000543941 PLEKHF1Q96S99 279 aa15.24■□□□□ 0.03
C1RL-209ENST00000543941 GPBP1L1Q9HC44 474 aaPredicted RBP15.24■□□□□ 0.03
C1RL-209ENST00000543941 PIM2Q9P1W9 311 aa15.24■□□□□ 0.03
C1RL-209ENST00000543941 MIS18AQ9NYP9 233 aa15.23■□□□□ 0.03
C1RL-209ENST00000543941 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
C1RL-209ENST00000543941 CAMTA2O94983 1202 aa15.22■□□□□ 0.03
C1RL-209ENST00000543941 STARD3NLO95772 234 aa15.22■□□□□ 0.03
C1RL-209ENST00000543941 FMNL2Q96PY5 1086 aa15.22■□□□□ 0.03
C1RL-209ENST00000543941 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
C1RL-209ENST00000543941 COL11A2P13942 1736 aaPredicted RBP15.22■□□□□ 0.03
C1RL-209ENST00000543941 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.03
C1RL-209ENST00000543941 NBPF26B4DH59 902 aa15.21■□□□□ 0.03
C1RL-209ENST00000543941 IL6STP40189 918 aaPredicted RBP15.21■□□□□ 0.03
C1RL-209ENST00000543941 DALRD3Q5D0E6 543 aaKnown RBP15.21■□□□□ 0.03
C1RL-209ENST00000543941 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
C1RL-209ENST00000543941 NBPF10Q6P3W6 841 aaKnown RBP15.21■□□□□ 0.03
C1RL-209ENST00000543941 NBPF15Q8N660 670 aa15.21■□□□□ 0.03
C1RL-209ENST00000543941 RASSF7Q02833 373 aa15.2■□□□□ 0.02
C1RL-209ENST00000543941 THUMPD2Q9BTF0 503 aaKnown RBP15.2■□□□□ 0.02
C1RL-209ENST00000543941 NMRK2Q9NPI5 230 aa15.2■□□□□ 0.02
C1RL-209ENST00000543941 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
C1RL-209ENST00000543941 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
C1RL-209ENST00000543941 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
C1RL-209ENST00000543941 TEX13AQ9BXU3 409 aaPredicted RBP15.19■□□□□ 0.02
C1RL-209ENST00000543941 A0A087WZG4 1122 aa15.17■□□□□ 0.02
C1RL-209ENST00000543941 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
C1RL-209ENST00000543941 C2CD5Q86YS7 1000 aa15.17■□□□□ 0.02
C1RL-209ENST00000543941 SLX4Q8IY92 1834 aa15.17■□□□□ 0.02
C1RL-209ENST00000543941 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
C1RL-209ENST00000543941 TAF7Q15545 349 aaPredicted RBP15.16■□□□□ 0.02
C1RL-209ENST00000543941 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
C1RL-209ENST00000543941 CACNA1SQ13698 1873 aa15.16■□□□□ 0.02
C1RL-209ENST00000543941 NFKBIEO00221 500 aa15.15■□□□□ 0.02
C1RL-209ENST00000543941 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
C1RL-209ENST00000543941 RNF181Q9P0P0 153 aa15.15■□□□□ 0.02
C1RL-209ENST00000543941 LAMB4A4D0S4 1761 aa15.15■□□□□ 0.02
C1RL-209ENST00000543941 FER1L6Q2WGJ9 1857 aa15.14■□□□□ 0.01
C1RL-209ENST00000543941 HLFQ16534 295 aa15.14■□□□□ 0.01
C1RL-209ENST00000543941 HSPA6P17066 643 aa15.13■□□□□ 0.01
C1RL-209ENST00000543941 EIF4A1P60842 406 aaKnown RBP15.13■□□□□ 0.01
C1RL-209ENST00000543941 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
C1RL-209ENST00000543941 NFE2L2Q16236 605 aa15.13■□□□□ 0.01
C1RL-209ENST00000543941 TTLL6Q8N841 843 aa15.13■□□□□ 0.01
C1RL-209ENST00000543941 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
C1RL-209ENST00000543941 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
C1RL-209ENST00000543941 H0YIN7 160 aa15.12■□□□□ 0.01
C1RL-209ENST00000543941 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
C1RL-209ENST00000543941 NUP98P52948 1817 aa15.12■□□□□ 0.01
C1RL-209ENST00000543941 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
C1RL-209ENST00000543941 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
C1RL-209ENST00000543941 TIAM2Q8IVF5 1701 aa15.11■□□□□ 0.01
C1RL-209ENST00000543941 ARFGEF2Q9Y6D5 1785 aa15.11■□□□□ 0.01
C1RL-209ENST00000543941 DICER1Q9UPY3 1922 aaKnown RBP15.1■□□□□ 0.01
C1RL-209ENST00000543941 C21orf2O43822 256 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms