RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	EXOC5	O00471	708 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	TCERG1	O14776	1098 aa	Known RBP	9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	CSB-PGBD3	P0DP91	1061 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	PIGB	Q92521	554 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	SLC4A9	Q96Q91	983 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ATG3	Q9NT62	314 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	FAM98C	Q17RN3	349 aa	Known RBP	9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ZNF790	Q6PG37	636 aa		9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	SEPT12	Q8IYM1	358 aa		9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	THUMPD2	Q9BTF0	503 aa	Known RBP	9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	LRRC37A	A6NMS7	1700 aa		9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	C1orf141	Q5JVX7	400 aa		9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	DDRGK1	Q96HY6	314 aa		9.4	□□□□□ -0.9
GTF2H3-212	ENST00000543341	GIGYF1	O75420	1035 aa	Predicted RBP	9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	PDE4A	P27815	886 aa		9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	MPRIP	Q6WCQ1	1025 aa		9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	COL15A1	P39059	1388 aa		9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	RARS	P54136	660 aa	Known RBP	9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	C8orf58	Q8NAV2	365 aa		9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	USP35	Q9P2H5	1018 aa		9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.39	□□□□□ -0.91
GTF2H3-212	ENST00000543341	SKAP1	Q86WV1	359 aa		9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ARHGAP45	Q92619	1136 aa		9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ARAP2	Q8WZ64	1704 aa		9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ABCC4	O15439	1325 aa		9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	MEX3C	Q5U5Q3	659 aa	Known RBP	9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	MRPL50	Q8N5N7	158 aa	Known RBP	9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	TSPYL6	Q8N831	410 aa		9.38	□□□□□ -0.91
GTF2H3-212	ENST00000543341	LTBP1	Q14766	1721 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	KCNQ3	O43525	872 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	NFATC2IP	Q8NCF5	419 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	BRCA1	P38398	1863 aa	Known RBP	9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ANKRD31	Q8N7Z5	1873 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	CNTNAP4	Q9C0A0	1308 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	PPP4R3CP	Q6ZMV5	832 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	TSR2	Q969E8	191 aa	Known RBP	9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	CRBN	Q96SW2	442 aa		9.37	□□□□□ -0.91
GTF2H3-212	ENST00000543341	PLSCR1	O15162	318 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	RXRB	P28702	533 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	RIC1	Q4ADV7	1423 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ZNF646	O15015	1829 aa	Predicted RBP	9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ZBTB7C	A1YPR0	619 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	RTF1	Q92541	710 aa	Known RBP	9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	BTBD11	A6QL63	1104 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	EXOSC9	Q06265	439 aa	Known RBP	9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	KRT27	Q7Z3Y8	459 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	PALLD	Q8WX93	1383 aa		9.36	□□□□□ -0.91
GTF2H3-212	ENST00000543341	FAM196A	Q6ZSG2	479 aa		9.35	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ADCY9	O60503	1353 aa		9.35	□□□□□ -0.91
GTF2H3-212	ENST00000543341	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.35	□□□□□ -0.91
GTF2H3-212	ENST00000543341	ZNF496	Q96IT1	587 aa	Predicted RBP	9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	RC3H1	Q5TC82	1133 aa	Known RBP	9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	PTF1A	Q7RTS3	328 aa		9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	PTPRC	P08575	1304 aa		9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	CYP19A1	P11511	503 aa	Predicted RBP	9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	SLC4A3	P48751	1232 aa		9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	GSE1	Q14687	1217 aa		9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	TSPYL4	Q9UJ04	414 aa		9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	UTY	O14607	1347 aa		9.34	□□□□□ -0.91
GTF2H3-212	ENST00000543341	TWISTNB	Q3B726	338 aa	Predicted RBP	9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	INTS5	Q6P9B9	1019 aa	Known RBP	9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	BRPF3	Q9ULD4	1205 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	COL11A2	P13942	1736 aa	Predicted RBP	9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	CABP4	P57796	275 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	FMNL2	Q96PY5	1086 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	ASAP1	Q9ULH1	1129 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	KRT24	Q2M2I5	525 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SSH1	Q8WYL5	1049 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	TMOD3	Q9NYL9	352 aa		9.33	□□□□□ -0.92
GTF2H3-212	ENST00000543341	KCNQ2	O43526	872 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	RGS3	P49796	1198 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SLC27A3	Q5K4L6	730 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	PROM2	Q8N271	834 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	NBPF26	B4DH59	902 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SNRPA1	P09661	255 aa	Known RBP	9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	PRIM1	P49642	420 aa	Known RBP	9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	NBPF14	Q5TI25	921 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	NBPF10	Q6P3W6	841 aa	Known RBP	9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	NBPF15	Q8N660	670 aa		9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SMARCC1	Q92922	1105 aa	Predicted RBP	9.32	□□□□□ -0.92
GTF2H3-212	ENST00000543341	TEF	Q10587	303 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	ITPK1	Q13572	414 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	PDE3A	Q14432	1141 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	ARX	Q96QS3	562 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	TEX13A	Q9BXU3	409 aa	Predicted RBP	9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	PRAMEF22	A3QJZ6	481 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	C20orf194	Q5TEA3	1177 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	CANX	P27824	592 aa	Known RBP	9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	NEUROD2	Q15784	382 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	AKT1S1	Q96B36	256 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	CAMKK2	Q96RR4	588 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	DDX21	Q9NR30	783 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	MIS18A	Q9NYP9	233 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	KIF16B	Q96L93	1317 aa		9.31	□□□□□ -0.92
GTF2H3-212	ENST00000543341	INTS3	Q68E01	1043 aa	Known RBP	9.3	□□□□□ -0.92
GTF2H3-212	ENST00000543341	DDX54	Q8TDD1	881 aa	Known RBP	9.3	□□□□□ -0.92
GTF2H3-212	ENST00000543341	BACH2	Q9BYV9	841 aa		9.3	□□□□□ -0.92
GTF2H3-212	ENST00000543341	MS4A1	P11836	297 aa		9.3	□□□□□ -0.92
GTF2H3-212	ENST00000543341	CHMP4A	Q9BY43	222 aa		9.3	□□□□□ -0.92
GTF2H3-212	ENST00000543341	CCDC125	Q86Z20	511 aa		9.3	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms