RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 RILPL2Q969X0 211 aa22.77■■□□□ 1.24
COPS7A-215ENST00000543155 BAG4O95429 457 aaKnown RBP22.76■■□□□ 1.23
COPS7A-215ENST00000543155 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
COPS7A-215ENST00000543155 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
COPS7A-215ENST00000543155 CYP2E1P05181 493 aaPredicted RBP22.76■■□□□ 1.23
COPS7A-215ENST00000543155 ADCY9O60503 1353 aa22.76■■□□□ 1.23
COPS7A-215ENST00000543155 PI4KAP2A4QPH2 592 aa22.75■■□□□ 1.23
COPS7A-215ENST00000543155 SURF6O75683 361 aaKnown RBP22.75■■□□□ 1.23
COPS7A-215ENST00000543155 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
COPS7A-215ENST00000543155 PI4KAP1Q8N8J0 262 aa22.75■■□□□ 1.23
COPS7A-215ENST00000543155 ANAPC15P60006 121 aa22.75■■□□□ 1.23
COPS7A-215ENST00000543155 IL1RAPL2Q9NP60 686 aa22.75■■□□□ 1.23
COPS7A-215ENST00000543155 DBF4Q9UBU7 674 aaPredicted RBP22.75■■□□□ 1.23
COPS7A-215ENST00000543155 SRGAP3O43295 1099 aa22.74■■□□□ 1.23
COPS7A-215ENST00000543155 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
COPS7A-215ENST00000543155 RHPN1Q8TCX5 695 aa22.73■■□□□ 1.23
COPS7A-215ENST00000543155 KIF1BPQ96EK5 621 aa22.73■■□□□ 1.23
COPS7A-215ENST00000543155 RGPD5Q99666 1765 aa22.73■■□□□ 1.23
COPS7A-215ENST00000543155 MCM2P49736 904 aa22.73■■□□□ 1.23
COPS7A-215ENST00000543155 GRPEL1Q9HAV7 217 aa22.73■■□□□ 1.23
COPS7A-215ENST00000543155 MST1RQ04912 1400 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 EPB41L2O43491 1005 aaKnown RBP22.72■■□□□ 1.23
COPS7A-215ENST00000543155 HEG1Q9ULI3 1381 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 ALS2Q96Q42 1657 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 HSP90AB4PQ58FF6 505 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 LMOD2Q6P5Q4 547 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 NUTM1Q86Y26 1132 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 UNC5CLQ8IV45 518 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 CRYBG1Q9Y4K1 1723 aa22.72■■□□□ 1.23
COPS7A-215ENST00000543155 NEK4P51957 841 aa22.71■■□□□ 1.23
COPS7A-215ENST00000543155 IL17RAQ96F46 866 aa22.71■■□□□ 1.23
COPS7A-215ENST00000543155 ANXA1P04083 346 aa22.7■■□□□ 1.23
COPS7A-215ENST00000543155 KRT28Q7Z3Y7 464 aa22.7■■□□□ 1.23
COPS7A-215ENST00000543155 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
COPS7A-215ENST00000543155 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
COPS7A-215ENST00000543155 KLHL40Q2TBA0 621 aa22.7■■□□□ 1.22
COPS7A-215ENST00000543155 ZGPATQ8N5A5 531 aaKnown RBP22.7■■□□□ 1.22
COPS7A-215ENST00000543155 PANK2Q9BZ23 570 aa22.7■■□□□ 1.22
COPS7A-215ENST00000543155 ALDH1L1O75891 902 aa22.69■■□□□ 1.22
COPS7A-215ENST00000543155 PI4K2BQ8TCG2 481 aa22.69■■□□□ 1.22
COPS7A-215ENST00000543155 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
COPS7A-215ENST00000543155 MTX1Q13505 466 aa22.68■■□□□ 1.22
COPS7A-215ENST00000543155 PALD1Q9ULE6 856 aa22.68■■□□□ 1.22
COPS7A-215ENST00000543155 PROSER2Q86WR7 435 aaPredicted RBP22.67■■□□□ 1.22
COPS7A-215ENST00000543155 TMX3Q96JJ7 454 aa22.67■■□□□ 1.22
COPS7A-215ENST00000543155 AXIN2Q9Y2T1 843 aa22.67■■□□□ 1.22
COPS7A-215ENST00000543155 MAP3K2Q9Y2U5 619 aa22.67■■□□□ 1.22
COPS7A-215ENST00000543155 MCTP1Q6DN14 999 aa22.67■■□□□ 1.22
COPS7A-215ENST00000543155 KSR2Q6VAB6 950 aa22.67■■□□□ 1.22
COPS7A-215ENST00000543155 DDX49Q9Y6V7 483 aaKnown RBP22.67■■□□□ 1.22
COPS7A-215ENST00000543155 PKP1Q13835 747 aa22.66■■□□□ 1.22
COPS7A-215ENST00000543155 HDAC5Q9UQL6 1122 aa22.66■■□□□ 1.22
COPS7A-215ENST00000543155 USP42Q9H9J4 1324 aaKnown RBP22.66■■□□□ 1.22
COPS7A-215ENST00000543155 SCN11AQ9UI33 1791 aa22.66■■□□□ 1.22
COPS7A-215ENST00000543155 HYPKQ9NX55 129 aa22.66■■□□□ 1.22
COPS7A-215ENST00000543155 CNTROBQ8N137 903 aa22.65■■□□□ 1.22
COPS7A-215ENST00000543155 ERBB3P21860 1342 aa22.65■■□□□ 1.22
COPS7A-215ENST00000543155 CUL4AQ13619 759 aa22.64■■□□□ 1.22
COPS7A-215ENST00000543155 PROSER3Q2NL68 480 aa22.64■■□□□ 1.22
COPS7A-215ENST00000543155 TTC41PQ6P2S7 1318 aa22.64■■□□□ 1.21
COPS7A-215ENST00000543155 GAS2L3Q86XJ1 694 aa22.64■■□□□ 1.21
COPS7A-215ENST00000543155 C9orf78Q9NZ63 289 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-215ENST00000543155 OS9Q13438 667 aaPredicted RBP22.63■■□□□ 1.21
COPS7A-215ENST00000543155 C19orf44Q9H6X5 657 aa22.63■■□□□ 1.21
COPS7A-215ENST00000543155 ZDHHC9Q9Y397 364 aa22.63■■□□□ 1.21
COPS7A-215ENST00000543155 ABCC6O95255 1503 aa22.63■■□□□ 1.21
COPS7A-215ENST00000543155 HSPA4P34932 840 aa22.63■■□□□ 1.21
COPS7A-215ENST00000543155 LMBRD1Q9NUN5 540 aa22.63■■□□□ 1.21
COPS7A-215ENST00000543155 C5P01031 1676 aa22.63■■□□□ 1.21
COPS7A-215ENST00000543155 MAP4K4O95819 1239 aaPredicted RBP22.62■■□□□ 1.21
COPS7A-215ENST00000543155 INTS4Q96HW7 963 aaKnown RBP22.62■■□□□ 1.21
COPS7A-215ENST00000543155 IL25Q9H293 177 aa22.62■■□□□ 1.21
COPS7A-215ENST00000543155 SGSM2O43147 1006 aa22.61■■□□□ 1.21
COPS7A-215ENST00000543155 RAD50Q92878 1312 aa22.61■■□□□ 1.21
COPS7A-215ENST00000543155 PRAMEF22A3QJZ6 481 aa22.61■■□□□ 1.21
COPS7A-215ENST00000543155 DDX58O95786 925 aaKnown RBP22.61■■□□□ 1.21
COPS7A-215ENST00000543155 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
COPS7A-215ENST00000543155 GLRX3O76003 335 aaKnown RBP22.6■■□□□ 1.21
COPS7A-215ENST00000543155 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
COPS7A-215ENST00000543155 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
COPS7A-215ENST00000543155 LINS1Q8NG48 757 aa22.6■■□□□ 1.21
COPS7A-215ENST00000543155 RAPGEF4Q8WZA2 1011 aa22.59■■□□□ 1.21
COPS7A-215ENST00000543155 COL18A1P39060 1754 aa22.59■■□□□ 1.21
COPS7A-215ENST00000543155 UTYO14607 1347 aa22.59■■□□□ 1.21
COPS7A-215ENST00000543155 ZC3H6P61129 1189 aaKnown RBP22.58■■□□□ 1.21
COPS7A-215ENST00000543155 CWF19L2Q2TBE0 894 aaKnown RBP22.58■■□□□ 1.21
COPS7A-215ENST00000543155 KDM6AO15550 1401 aaPredicted RBP22.58■■□□□ 1.21
COPS7A-215ENST00000543155 GRM8O00222 908 aa22.57■■□□□ 1.2
COPS7A-215ENST00000543155 GPATCH3Q96I76 525 aa22.57■■□□□ 1.2
COPS7A-215ENST00000543155 RRAGDQ9NQL2 400 aaPredicted RBP22.57■■□□□ 1.2
COPS7A-215ENST00000543155 UPF3BQ9BZI7 483 aaKnown RBP22.57■■□□□ 1.2
COPS7A-215ENST00000543155 LSG1Q9H089 658 aaKnown RBP22.57■■□□□ 1.2
COPS7A-215ENST00000543155 NPHP3Q7Z494 1330 aa22.56■■□□□ 1.2
COPS7A-215ENST00000543155 PLEKHG2Q9H7P9 1386 aa22.56■■□□□ 1.2
COPS7A-215ENST00000543155 ZNF445P59923 1031 aa22.56■■□□□ 1.2
COPS7A-215ENST00000543155 SLC52A2Q9HAB3 445 aa22.56■■□□□ 1.2
COPS7A-215ENST00000543155 DCCP43146 1447 aa22.56■■□□□ 1.2
COPS7A-215ENST00000543155 BRD1O95696 1058 aa22.55■■□□□ 1.2
COPS7A-215ENST00000543155 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms