RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CRKLP46109 303 aaKnown RBP25.33■■□□□ 1.65
DDX55-207ENST00000540763 WDR63Q8IWG1 891 aa25.33■■□□□ 1.65
DDX55-207ENST00000540763 PNPLA7Q6ZV29 1317 aa25.33■■□□□ 1.64
DDX55-207ENST00000540763 CCDC87Q9NVE4 849 aa25.31■■□□□ 1.64
DDX55-207ENST00000540763 GNPATO15228 680 aa25.3■■□□□ 1.64
DDX55-207ENST00000540763 RPS6KA4O75676 772 aa25.3■■□□□ 1.64
DDX55-207ENST00000540763 ADRA2BP18089 450 aa25.3■■□□□ 1.64
DDX55-207ENST00000540763 ZNF521Q96K83 1311 aa25.3■■□□□ 1.64
DDX55-207ENST00000540763 DCAF8L1A6NGE4 600 aa25.29■■□□□ 1.64
DDX55-207ENST00000540763 GIGYF1O75420 1035 aaPredicted RBP25.29■■□□□ 1.64
DDX55-207ENST00000540763 INTS5Q6P9B9 1019 aaKnown RBP25.29■■□□□ 1.64
DDX55-207ENST00000540763 MBIPQ9NS73 344 aa25.29■■□□□ 1.64
DDX55-207ENST00000540763 RTCBQ9Y3I0 505 aaKnown RBP25.29■■□□□ 1.64
DDX55-207ENST00000540763 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
DDX55-207ENST00000540763 SLC16A10Q8TF71 515 aa25.27■■□□□ 1.64
DDX55-207ENST00000540763 PDGFDQ9GZP0 370 aaPredicted RBP25.27■■□□□ 1.64
DDX55-207ENST00000540763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.26■■□□□ 1.63
DDX55-207ENST00000540763 HOXB7P09629 217 aa25.26■■□□□ 1.63
DDX55-207ENST00000540763 YY1P25490 414 aa25.26■■□□□ 1.63
DDX55-207ENST00000540763 SALL2Q9Y467 1007 aaPredicted RBP25.26■■□□□ 1.63
DDX55-207ENST00000540763 USP16Q9Y5T5 823 aa25.26■■□□□ 1.63
DDX55-207ENST00000540763 SENP3-EIF4A1A0A087X0R7 540 aa25.25■■□□□ 1.63
DDX55-207ENST00000540763 ZBTB1Q9Y2K1 713 aa25.25■■□□□ 1.63
DDX55-207ENST00000540763 SOS1Q07889 1333 aaPredicted RBP25.25■■□□□ 1.63
DDX55-207ENST00000540763 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
DDX55-207ENST00000540763 ZBTB7AO95365 584 aa25.24■■□□□ 1.63
DDX55-207ENST00000540763 AMIGO3Q86WK7 504 aa25.24■■□□□ 1.63
DDX55-207ENST00000540763 COL23A1Q86Y22 540 aaPredicted RBP25.24■■□□□ 1.63
DDX55-207ENST00000540763 ERBB4Q15303 1308 aa25.23■■□□□ 1.63
DDX55-207ENST00000540763 SCN7AQ01118 1682 aa25.23■■□□□ 1.63
DDX55-207ENST00000540763 COL15A1P39059 1388 aa25.22■■□□□ 1.63
DDX55-207ENST00000540763 IL6STP40189 918 aaPredicted RBP25.22■■□□□ 1.63
DDX55-207ENST00000540763 TRAPPC3LQ5T215 181 aa25.22■■□□□ 1.63
DDX55-207ENST00000540763 BCORQ6W2J9 1755 aa25.22■■□□□ 1.63
DDX55-207ENST00000540763 PHF14O94880 888 aa25.21■■□□□ 1.63
DDX55-207ENST00000540763 MTFR1LQ9H019 292 aa25.21■■□□□ 1.63
DDX55-207ENST00000540763 EIF5P55010 431 aaKnown RBP25.2■■□□□ 1.62
DDX55-207ENST00000540763 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
DDX55-207ENST00000540763 PTGER2P43116 358 aa25.19■■□□□ 1.62
DDX55-207ENST00000540763 ATF5Q9Y2D1 282 aaPredicted RBP25.19■■□□□ 1.62
DDX55-207ENST00000540763 CACNA1FO60840 1977 aa25.18■■□□□ 1.62
DDX55-207ENST00000540763 FANCIQ9NVI1 1328 aa25.18■■□□□ 1.62
DDX55-207ENST00000540763 A0A087WZG4 1122 aa25.18■■□□□ 1.62
DDX55-207ENST00000540763 A1BGP04217 495 aa25.18■■□□□ 1.62
DDX55-207ENST00000540763 CANXP27824 592 aaKnown RBP25.18■■□□□ 1.62
DDX55-207ENST00000540763 ARHGEF1Q92888 912 aaKnown RBP25.18■■□□□ 1.62
DDX55-207ENST00000540763 RFC4P35249 363 aa25.17■■□□□ 1.62
DDX55-207ENST00000540763 GOLGA2Q08379 1002 aa25.17■■□□□ 1.62
DDX55-207ENST00000540763 TSR2Q969E8 191 aaKnown RBP25.17■■□□□ 1.62
DDX55-207ENST00000540763 CHMP4AQ9BY43 222 aa25.17■■□□□ 1.62
DDX55-207ENST00000540763 USP42Q9H9J4 1324 aaKnown RBP25.16■■□□□ 1.62
DDX55-207ENST00000540763 MSH5O43196 834 aa25.16■■□□□ 1.62
DDX55-207ENST00000540763 KRT24Q2M2I5 525 aa25.16■■□□□ 1.62
DDX55-207ENST00000540763 DUSP27Q5VZP5 1158 aa25.16■■□□□ 1.62
DDX55-207ENST00000540763 E9PSI1 815 aa25.15■■□□□ 1.62
DDX55-207ENST00000540763 NBPF26B4DH59 902 aa25.14■■□□□ 1.62
DDX55-207ENST00000540763 NBPF10Q6P3W6 841 aaKnown RBP25.14■■□□□ 1.62
DDX55-207ENST00000540763 SMIM5Q71RC9 77 aa25.14■■□□□ 1.62
DDX55-207ENST00000540763 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.62
DDX55-207ENST00000540763 NBPF15Q8N660 670 aa25.14■■□□□ 1.62
DDX55-207ENST00000540763 SPINK5Q9NQ38 1064 aaPredicted RBP25.14■■□□□ 1.62
DDX55-207ENST00000540763 NARFQ9UHQ1 456 aa25.13■■□□□ 1.61
DDX55-207ENST00000540763 RGL2O15211 777 aa25.12■■□□□ 1.61
DDX55-207ENST00000540763 HNRNPUQ00839 825 aaKnown RBP eCLIP25.12■■□□□ 1.61
DDX55-207ENST00000540763 HDGFL1Q5TGJ6 251 aa25.12■■□□□ 1.61
DDX55-207ENST00000540763 C8orf58Q8NAV2 365 aa25.12■■□□□ 1.61
DDX55-207ENST00000540763 EIF2S2P20042 333 aaKnown RBP25.11■■□□□ 1.61
DDX55-207ENST00000540763 SGIP1Q9BQI5 828 aa25.11■■□□□ 1.61
DDX55-207ENST00000540763 ZPR1O75312 459 aa25.1■■□□□ 1.61
DDX55-207ENST00000540763 GYS1P13807 737 aa25.1■■□□□ 1.61
DDX55-207ENST00000540763 SLFN5Q08AF3 891 aa25.1■■□□□ 1.61
DDX55-207ENST00000540763 PDIA6Q15084 440 aa25.1■■□□□ 1.61
DDX55-207ENST00000540763 FHDC1Q9C0D6 1143 aaPredicted RBP25.1■■□□□ 1.61
DDX55-207ENST00000540763 TWISTNBQ3B726 338 aaPredicted RBP25.09■■□□□ 1.61
DDX55-207ENST00000540763 NLGN1Q8N2Q7 840 aa25.09■■□□□ 1.61
DDX55-207ENST00000540763 SYT17Q9BSW7 474 aa25.09■■□□□ 1.61
DDX55-207ENST00000540763 DDX21Q9NR30 783 aaKnown RBP eCLIP25.09■■□□□ 1.61
DDX55-207ENST00000540763 NUP98P52948 1817 aa25.09■■□□□ 1.61
DDX55-207ENST00000540763 ZBED9Q6R2W3 1325 aa25.09■■□□□ 1.61
DDX55-207ENST00000540763 PIP4K2AP48426 406 aaPredicted RBP25.08■■□□□ 1.61
DDX55-207ENST00000540763 LRP10Q7Z4F1 713 aa25.08■■□□□ 1.61
DDX55-207ENST00000540763 DZIP3Q86Y13 1208 aaKnown RBP25.08■■□□□ 1.61
DDX55-207ENST00000540763 TSPYL6Q8N831 410 aa25.08■■□□□ 1.61
DDX55-207ENST00000540763 DBF4Q9UBU7 674 aaPredicted RBP25.08■■□□□ 1.61
DDX55-207ENST00000540763 ZNF330Q9Y3S2 320 aaPredicted RBP25.08■■□□□ 1.61
DDX55-207ENST00000540763 TRMT2AQ8IZ69 625 aaKnown RBP25.07■■□□□ 1.6
DDX55-207ENST00000540763 SRP68Q9UHB9 627 aaKnown RBP25.07■■□□□ 1.6
DDX55-207ENST00000540763 POLD1P28340 1107 aa25.06■■□□□ 1.6
DDX55-207ENST00000540763 EXOSC9Q06265 439 aaKnown RBP25.06■■□□□ 1.6
DDX55-207ENST00000540763 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
DDX55-207ENST00000540763 USPL1Q5W0Q7 1092 aa25.06■■□□□ 1.6
DDX55-207ENST00000540763 ANKRD36CQ5JPF3 1778 aa25.05■■□□□ 1.6
DDX55-207ENST00000540763 ELL2O00472 640 aaPredicted RBP25.05■■□□□ 1.6
DDX55-207ENST00000540763 CAMTA2O94983 1202 aa25.05■■□□□ 1.6
DDX55-207ENST00000540763 MYL6BP14649 208 aa25.05■■□□□ 1.6
DDX55-207ENST00000540763 CHPF2Q9P2E5 772 aa25.05■■□□□ 1.6
DDX55-207ENST00000540763 NRXN2Q9P2S2 1712 aa25.04■■□□□ 1.6
DDX55-207ENST00000540763 MSL1Q68DK7 614 aa25.04■■□□□ 1.6
DDX55-207ENST00000540763 CLEC4GQ6UXB4 293 aa25.04■■□□□ 1.6
DDX55-207ENST00000540763 NECTIN2Q92692 538 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms