RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 CCDC8Q9H0W5 538 aaPredicted RBP20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 CLASRPQ8N2M8 674 aaKnown RBP20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 SNX21Q969T3 373 aa20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 ATP5J2-PTCD1G3V325 749 aa20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 DIAPH3Q9NSV4 1193 aa20.82■□□□□ 0.92
EPB41L3-204ENST00000540638 EIF5BO60841 1220 aaKnown RBP20.81■□□□□ 0.92
EPB41L3-204ENST00000540638 L1TD1Q5T7N2 865 aaKnown RBP20.81■□□□□ 0.92
EPB41L3-204ENST00000540638 NEXNQ0ZGT2 675 aa20.81■□□□□ 0.92
EPB41L3-204ENST00000540638 SOS1Q07889 1333 aaPredicted RBP20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 DDX58O95786 925 aaKnown RBP20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 AACSQ86V21 672 aa20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 G3BP1Q13283 466 aaKnown RBP eCLIP20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 TOM1L2Q6ZVM7 507 aa20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 MYD88Q99836 296 aa20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 PRDM11Q9NQV5 511 aa20.8■□□□□ 0.92
EPB41L3-204ENST00000540638 PALD1Q9ULE6 856 aa20.79■□□□□ 0.92
EPB41L3-204ENST00000540638 ARHGAP23Q9P227 1491 aa20.79■□□□□ 0.92
EPB41L3-204ENST00000540638 ESYT1Q9BSJ8 1104 aa20.79■□□□□ 0.92
EPB41L3-204ENST00000540638 TAOK2Q9UL54 1235 aa20.79■□□□□ 0.92
EPB41L3-204ENST00000540638 COPS6Q7L5N1 327 aa20.78■□□□□ 0.92
EPB41L3-204ENST00000540638 KIF1BPQ96EK5 621 aa20.78■□□□□ 0.92
EPB41L3-204ENST00000540638 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
EPB41L3-204ENST00000540638 NPHP4O75161 1426 aaPredicted RBP20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 CABP4P57796 275 aa20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 KIF24Q5T7B8 1368 aa20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 XAGE3Q8WTP9 111 aa20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 AKAP12Q02952 1782 aa20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 KAT6BQ8WYB5 2073 aa20.77■□□□□ 0.92
EPB41L3-204ENST00000540638 SLIT1O75093 1534 aa20.77■□□□□ 0.91
EPB41L3-204ENST00000540638 CHMLP26374 656 aa20.77■□□□□ 0.91
EPB41L3-204ENST00000540638 CHMP4AQ9BY43 222 aa20.76■□□□□ 0.91
EPB41L3-204ENST00000540638 BEND3Q5T5X7 828 aa20.76■□□□□ 0.91
EPB41L3-204ENST00000540638 EVA1CP58658 441 aa20.76■□□□□ 0.91
EPB41L3-204ENST00000540638 CCDC85AQ96PX6 553 aaPredicted RBP20.76■□□□□ 0.91
EPB41L3-204ENST00000540638 CPA1P15085 419 aa20.75■□□□□ 0.91
EPB41L3-204ENST00000540638 CAVIN1Q6NZI2 390 aaKnown RBP20.75■□□□□ 0.91
EPB41L3-204ENST00000540638 CNTROBQ8N137 903 aa20.75■□□□□ 0.91
EPB41L3-204ENST00000540638 BOLA2Q9H3K6 86 aa20.75■□□□□ 0.91
EPB41L3-204ENST00000540638 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
EPB41L3-204ENST00000540638 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
EPB41L3-204ENST00000540638 USP16Q9Y5T5 823 aa20.74■□□□□ 0.91
EPB41L3-204ENST00000540638 KNDC1Q76NI1 1749 aa20.74■□□□□ 0.91
EPB41L3-204ENST00000540638 ZNF790Q6PG37 636 aa20.73■□□□□ 0.91
EPB41L3-204ENST00000540638 RAB3GAP1Q15042 981 aa20.73■□□□□ 0.91
EPB41L3-204ENST00000540638 GPATCH3Q96I76 525 aa20.73■□□□□ 0.91
EPB41L3-204ENST00000540638 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 UBE3BQ7Z3V4 1068 aa20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 SYTL4Q96C24 671 aaPredicted RBP20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 NDUFB9Q9Y6M9 179 aa20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 ADGRL3Q9HAR2 1447 aa20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 BAG4O95429 457 aaKnown RBP20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 XRCC6P12956 609 aaKnown RBP eCLIP20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 TMX3Q96JJ7 454 aa20.72■□□□□ 0.91
EPB41L3-204ENST00000540638 HSP90AB4PQ58FF6 505 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 SSH3Q8TE77 659 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 TRIM44Q96DX7 344 aaPredicted RBP20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 GDPD2Q9HCC8 539 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 CIZ1Q9ULV3 898 aaPredicted RBP20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 IBTKQ9P2D0 1353 aaPredicted RBP20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 ERBB3P21860 1342 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 IL25Q9H293 177 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 GRM8O00222 908 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 NUCB2P80303 420 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 ANP32BQ92688 251 aaKnown RBP20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 SUCLG2Q96I99 432 aa20.71■□□□□ 0.91
EPB41L3-204ENST00000540638 IFNL2Q8IZJ0 200 aa20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 NEUROD6Q96NK8 337 aa20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 PIK3C2AO00443 1686 aa20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 DNAJC2Q99543 621 aaKnown RBP20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 FSD1Q9BTV5 496 aa20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
EPB41L3-204ENST00000540638 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
EPB41L3-204ENST00000540638 RAB11FIP3O75154 756 aa20.69■□□□□ 0.9
EPB41L3-204ENST00000540638 TCEANC2Q96MN5 208 aa20.69■□□□□ 0.9
EPB41L3-204ENST00000540638 ZBTB3Q9H5J0 574 aa20.69■□□□□ 0.9
EPB41L3-204ENST00000540638 PRPF40BQ6NWY9 871 aaKnown RBP20.68■□□□□ 0.9
EPB41L3-204ENST00000540638 EDC3Q96F86 508 aaKnown RBP20.67■□□□□ 0.9
EPB41L3-204ENST00000540638 RBM27Q9P2N5 1060 aaKnown RBP20.67■□□□□ 0.9
EPB41L3-204ENST00000540638 ANKRD13DQ6ZTN6 518 aa20.67■□□□□ 0.9
EPB41L3-204ENST00000540638 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
EPB41L3-204ENST00000540638 A0A087WZG4 1122 aa20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 DDX21Q9NR30 783 aaKnown RBP eCLIP20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 LARP1Q6PKG0 1096 aaKnown RBP20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 SLC52A2Q9HAB3 445 aa20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 NPHP3Q7Z494 1330 aa20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 CASTP20810 708 aaKnown RBP20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
EPB41L3-204ENST00000540638 GLRX3O76003 335 aaKnown RBP20.65■□□□□ 0.9
EPB41L3-204ENST00000540638 FGD1P98174 961 aa20.65■□□□□ 0.9
EPB41L3-204ENST00000540638 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
EPB41L3-204ENST00000540638 PHKG2P15735 406 aa20.65■□□□□ 0.9
EPB41L3-204ENST00000540638 JAKMIP1Q96N16 626 aaKnown RBP20.65■□□□□ 0.9
EPB41L3-204ENST00000540638 HDAC5Q9UQL6 1122 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms