RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CCDC87Q9NVE4 849 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 KDM3BQ7LBC6 1761 aa28.87■■■□□ 2.21
TRIM65-202ENST00000540128 WWC1Q8IX03 1113 aa28.86■■■□□ 2.21
TRIM65-202ENST00000540128 MTFR1LQ9H019 292 aa28.86■■■□□ 2.21
TRIM65-202ENST00000540128 GIGYF1O75420 1035 aaPredicted RBP28.84■■■□□ 2.21
TRIM65-202ENST00000540128 TRAPPC3LQ5T215 181 aa28.84■■■□□ 2.21
TRIM65-202ENST00000540128 SMIM5Q71RC9 77 aa28.84■■■□□ 2.21
TRIM65-202ENST00000540128 SPON1Q9HCB6 807 aa28.84■■■□□ 2.21
TRIM65-202ENST00000540128 IFT57Q9NWB7 429 aa28.84■■■□□ 2.21
TRIM65-202ENST00000540128 USP16Q9Y5T5 823 aa28.84■■■□□ 2.21
TRIM65-202ENST00000540128 ZBTB7AO95365 584 aa28.83■■■□□ 2.21
TRIM65-202ENST00000540128 PRAMEF22A3QJZ6 481 aa28.82■■■□□ 2.2
TRIM65-202ENST00000540128 PHF14O94880 888 aa28.82■■■□□ 2.2
TRIM65-202ENST00000540128 ARHGEF1Q92888 912 aaKnown RBP28.81■■■□□ 2.2
TRIM65-202ENST00000540128 ZBTB1Q9Y2K1 713 aa28.81■■■□□ 2.2
TRIM65-202ENST00000540128 SOS1Q07889 1333 aaPredicted RBP28.8■■■□□ 2.2
TRIM65-202ENST00000540128 GNAI1P63096 354 aa28.8■■■□□ 2.2
TRIM65-202ENST00000540128 SENP3-EIF4A1A0A087X0R7 540 aa28.79■■■□□ 2.2
TRIM65-202ENST00000540128 MSH5O43196 834 aa28.79■■■□□ 2.2
TRIM65-202ENST00000540128 SGIP1Q9BQI5 828 aa28.79■■■□□ 2.2
TRIM65-202ENST00000540128 ATF5Q9Y2D1 282 aaPredicted RBP28.79■■■□□ 2.2
TRIM65-202ENST00000540128 LAS1LQ9Y4W2 734 aaKnown RBP28.79■■■□□ 2.2
TRIM65-202ENST00000540128 IL16Q14005 1332 aa28.78■■■□□ 2.2
TRIM65-202ENST00000540128 A1BGP04217 495 aa28.77■■■□□ 2.2
TRIM65-202ENST00000540128 PTGER2P43116 358 aa28.77■■■□□ 2.2
TRIM65-202ENST00000540128 EIF5P55010 431 aaKnown RBP28.77■■■□□ 2.2
TRIM65-202ENST00000540128 WDR63Q8IWG1 891 aa28.77■■■□□ 2.2
TRIM65-202ENST00000540128 MBIPQ9NS73 344 aa28.77■■■□□ 2.2
TRIM65-202ENST00000540128 LRP5O75197 1615 aa28.76■■■□□ 2.2
TRIM65-202ENST00000540128 CANXP27824 592 aaKnown RBP28.75■■■□□ 2.19
TRIM65-202ENST00000540128 IL6STP40189 918 aaPredicted RBP28.75■■■□□ 2.19
TRIM65-202ENST00000540128 RFC4P35249 363 aa28.74■■■□□ 2.19
TRIM65-202ENST00000540128 SALL2Q9Y467 1007 aaPredicted RBP28.73■■■□□ 2.19
TRIM65-202ENST00000540128 COL24A1Q17RW2 1714 aa28.72■■■□□ 2.19
TRIM65-202ENST00000540128 NBPF26B4DH59 902 aa28.72■■■□□ 2.19
TRIM65-202ENST00000540128 NBPF10Q6P3W6 841 aaKnown RBP28.72■■■□□ 2.19
TRIM65-202ENST00000540128 NBPF15Q8N660 670 aa28.72■■■□□ 2.19
TRIM65-202ENST00000540128 ZNF521Q96K83 1311 aa28.71■■■□□ 2.19
TRIM65-202ENST00000540128 A0A087WZG4 1122 aa28.71■■■□□ 2.19
TRIM65-202ENST00000540128 USP42Q9H9J4 1324 aaKnown RBP28.7■■■□□ 2.19
TRIM65-202ENST00000540128 HOXB7P09629 217 aa28.7■■■□□ 2.18
TRIM65-202ENST00000540128 COL15A1P39059 1388 aa28.7■■■□□ 2.18
TRIM65-202ENST00000540128 GYS1P13807 737 aa28.69■■■□□ 2.18
TRIM65-202ENST00000540128 KRT24Q2M2I5 525 aa28.69■■■□□ 2.18
TRIM65-202ENST00000540128 NLGN1Q8N2Q7 840 aa28.69■■■□□ 2.18
TRIM65-202ENST00000540128 NARFQ9UHQ1 456 aa28.69■■■□□ 2.18
TRIM65-202ENST00000540128 ERBB4Q15303 1308 aa28.69■■■□□ 2.18
TRIM65-202ENST00000540128 POLD1P28340 1107 aa28.67■■■□□ 2.18
TRIM65-202ENST00000540128 MSL1Q68DK7 614 aa28.67■■■□□ 2.18
TRIM65-202ENST00000540128 SRP68Q9UHB9 627 aaKnown RBP28.67■■■□□ 2.18
TRIM65-202ENST00000540128 LAMB4A4D0S4 1761 aa28.66■■■□□ 2.18
TRIM65-202ENST00000540128 ZPR1O75312 459 aa28.66■■■□□ 2.18
TRIM65-202ENST00000540128 DUSP27Q5VZP5 1158 aa28.66■■■□□ 2.18
TRIM65-202ENST00000540128 PIP4K2AP48426 406 aaPredicted RBP28.65■■■□□ 2.18
TRIM65-202ENST00000540128 C4AP0C0L4 1744 aa28.64■■■□□ 2.18
TRIM65-202ENST00000540128 ARXQ96QS3 562 aa28.64■■■□□ 2.18
TRIM65-202ENST00000540128 EIF2S2P20042 333 aaKnown RBP28.63■■■□□ 2.17
TRIM65-202ENST00000540128 PDIA6Q15084 440 aa28.63■■■□□ 2.17
TRIM65-202ENST00000540128 USPL1Q5W0Q7 1092 aa28.63■■■□□ 2.17
TRIM65-202ENST00000540128 NPM2Q86SE8 214 aaKnown RBP28.63■■■□□ 2.17
TRIM65-202ENST00000540128 TSR2Q969E8 191 aaKnown RBP28.63■■■□□ 2.17
TRIM65-202ENST00000540128 C8orf58Q8NAV2 365 aa28.62■■■□□ 2.17
TRIM65-202ENST00000540128 BCL2L12Q9HB09 334 aa28.62■■■□□ 2.17
TRIM65-202ENST00000540128 SPINK5Q9NQ38 1064 aaPredicted RBP28.62■■■□□ 2.17
TRIM65-202ENST00000540128 SRCAPQ6ZRS2 3230 aa28.61■■■□□ 2.17
TRIM65-202ENST00000540128 FKBP8Q14318 412 aa28.61■■■□□ 2.17
TRIM65-202ENST00000540128 LRP10Q7Z4F1 713 aa28.61■■■□□ 2.17
TRIM65-202ENST00000540128 PPP1R1BQ9UD71 204 aaPredicted RBP28.61■■■□□ 2.17
TRIM65-202ENST00000540128 TBC1D2BQ9UPU7 963 aa28.61■■■□□ 2.17
TRIM65-202ENST00000540128 ZNF330Q9Y3S2 320 aaPredicted RBP28.61■■■□□ 2.17
TRIM65-202ENST00000540128 RGL2O15211 777 aa28.6■■■□□ 2.17
TRIM65-202ENST00000540128 CAMTA2O94983 1202 aa28.6■■■□□ 2.17
TRIM65-202ENST00000540128 DZIP3Q86Y13 1208 aaKnown RBP28.6■■■□□ 2.17
TRIM65-202ENST00000540128 MMP10P09238 476 aa28.59■■■□□ 2.17
TRIM65-202ENST00000540128 TM4SF1P30408 202 aa28.59■■■□□ 2.17
TRIM65-202ENST00000540128 FANCIQ9NVI1 1328 aa28.59■■■□□ 2.17
TRIM65-202ENST00000540128 HDGFL1Q5TGJ6 251 aa28.58■■■□□ 2.17
TRIM65-202ENST00000540128 MYH16Q9H6N6 1097 aa28.58■■■□□ 2.17
TRIM65-202ENST00000540128 GOLGA2Q08379 1002 aa28.57■■■□□ 2.16
TRIM65-202ENST00000540128 TSPYL6Q8N831 410 aa28.57■■■□□ 2.16
TRIM65-202ENST00000540128 CHMP4AQ9BY43 222 aa28.57■■■□□ 2.16
TRIM65-202ENST00000540128 DDX21Q9NR30 783 aaKnown RBP eCLIP28.57■■■□□ 2.16
TRIM65-202ENST00000540128 ELL2O00472 640 aaPredicted RBP28.56■■■□□ 2.16
TRIM65-202ENST00000540128 PROSER3Q2NL68 480 aa28.56■■■□□ 2.16
TRIM65-202ENST00000540128 MYL6BP14649 208 aa28.55■■■□□ 2.16
TRIM65-202ENST00000540128 CLEC4GQ6UXB4 293 aa28.55■■■□□ 2.16
TRIM65-202ENST00000540128 NECTIN2Q92692 538 aa28.55■■■□□ 2.16
TRIM65-202ENST00000540128 DBF4Q9UBU7 674 aaPredicted RBP28.54■■■□□ 2.16
TRIM65-202ENST00000540128 ERVV-1B6SEH8 477 aa28.53■■■□□ 2.16
TRIM65-202ENST00000540128 NFIXQ14938 502 aa28.53■■■□□ 2.16
TRIM65-202ENST00000540128 CHPF2Q9P2E5 772 aa28.53■■■□□ 2.16
TRIM65-202ENST00000540128 E9PSI1 815 aa28.52■■■□□ 2.16
TRIM65-202ENST00000540128 DDR1Q08345 913 aa28.52■■■□□ 2.16
TRIM65-202ENST00000540128 TWISTNBQ3B726 338 aaPredicted RBP28.52■■■□□ 2.16
TRIM65-202ENST00000540128 FHDC1Q9C0D6 1143 aaPredicted RBP28.52■■■□□ 2.16
TRIM65-202ENST00000540128 ANXA1P04083 346 aa28.51■■■□□ 2.15
TRIM65-202ENST00000540128 SLFN5Q08AF3 891 aa28.51■■■□□ 2.15
TRIM65-202ENST00000540128 TTLL7Q6ZT98 887 aa28.51■■■□□ 2.15
TRIM65-202ENST00000540128 PARP3Q9Y6F1 533 aa28.51■■■□□ 2.15
TRIM65-202ENST00000540128 MAP3K15Q6ZN16 1313 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms