RNA–Protein interactions for RNA: ENST00000539594.5

ESRRA-206, Transcript of estrogen related receptor alpha, humanhuman

TSL 3

Gene ESRRA, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-206ENST00000539594 NLGN1Q8N2Q7 840 aa36.9■■■■□ 3.5
ESRRA-206ENST00000539594 SOS1Q07889 1333 aaPredicted RBP36.89■■■■□ 3.5
ESRRA-206ENST00000539594 ZBTB1Q9Y2K1 713 aa36.87■■■■□ 3.49
ESRRA-206ENST00000539594 DCAF8L1A6NGE4 600 aa36.86■■■■□ 3.49
ESRRA-206ENST00000539594 SNRPA1P09661 255 aaKnown RBP36.86■■■■□ 3.49
ESRRA-206ENST00000539594 KDM3BQ7LBC6 1761 aa36.86■■■■□ 3.49
ESRRA-206ENST00000539594 THUMPD2Q9BTF0 503 aaKnown RBP36.85■■■■□ 3.49
ESRRA-206ENST00000539594 GYS1P13807 737 aa36.84■■■■□ 3.49
ESRRA-206ENST00000539594 USP42Q9H9J4 1324 aaKnown RBP36.84■■■■□ 3.49
ESRRA-206ENST00000539594 COL15A1P39059 1388 aa36.82■■■■□ 3.49
ESRRA-206ENST00000539594 KLHL34Q8N239 644 aa36.82■■■■□ 3.48
ESRRA-206ENST00000539594 BABAM1Q9NWV8 329 aa36.82■■■■□ 3.48
ESRRA-206ENST00000539594 RRP7AQ9Y3A4 280 aaKnown RBP36.82■■■■□ 3.48
ESRRA-206ENST00000539594 ZPR1O75312 459 aa36.81■■■■□ 3.48
ESRRA-206ENST00000539594 CANXP27824 592 aaKnown RBP36.81■■■■□ 3.48
ESRRA-206ENST00000539594 NEUROD2Q15784 382 aa36.81■■■■□ 3.48
ESRRA-206ENST00000539594 MIS18AQ9NYP9 233 aa36.81■■■■□ 3.48
ESRRA-206ENST00000539594 A0A087WZG4 1122 aa36.8■■■■□ 3.48
ESRRA-206ENST00000539594 CD2APQ9Y5K6 639 aa36.8■■■■□ 3.48
ESRRA-206ENST00000539594 MMP10P09238 476 aa36.79■■■■□ 3.48
ESRRA-206ENST00000539594 CCDC184Q52MB2 194 aa36.79■■■■□ 3.48
ESRRA-206ENST00000539594 IL6STP40189 918 aaPredicted RBP36.78■■■■□ 3.48
ESRRA-206ENST00000539594 EIF5P55010 431 aaKnown RBP36.78■■■■□ 3.48
ESRRA-206ENST00000539594 MRS2Q9HD23 443 aa36.78■■■■□ 3.48
ESRRA-206ENST00000539594 NPM2Q86SE8 214 aaKnown RBP36.77■■■■□ 3.48
ESRRA-206ENST00000539594 SRP68Q9UHB9 627 aaKnown RBP36.77■■■■□ 3.48
ESRRA-206ENST00000539594 NARFQ9UHQ1 456 aa36.77■■■■□ 3.48
ESRRA-206ENST00000539594 USP16Q9Y5T5 823 aa36.77■■■■□ 3.48
ESRRA-206ENST00000539594 TSPYL4Q9UJ04 414 aa36.75■■■■□ 3.47
ESRRA-206ENST00000539594 TRIM35Q9UPQ4 493 aa36.75■■■■□ 3.47
ESRRA-206ENST00000539594 EIF4A1P60842 406 aaKnown RBP36.74■■■■□ 3.47
ESRRA-206ENST00000539594 A1BGP04217 495 aa36.73■■■■□ 3.47
ESRRA-206ENST00000539594 LAMB4A4D0S4 1761 aa36.73■■■■□ 3.47
ESRRA-206ENST00000539594 APAF1O14727 1248 aa36.72■■■■□ 3.47
ESRRA-206ENST00000539594 USPL1Q5W0Q7 1092 aa36.72■■■■□ 3.47
ESRRA-206ENST00000539594 PARP3Q9Y6F1 533 aa36.72■■■■□ 3.47
ESRRA-206ENST00000539594 PRAMEF22A3QJZ6 481 aa36.71■■■■□ 3.47
ESRRA-206ENST00000539594 GIGYF1O75420 1035 aaPredicted RBP36.7■■■■□ 3.47
ESRRA-206ENST00000539594 FKBP8Q14318 412 aa36.7■■■■□ 3.47
ESRRA-206ENST00000539594 ZNF330Q9Y3S2 320 aaPredicted RBP36.68■■■■□ 3.46
ESRRA-206ENST00000539594 NLGN2Q8NFZ4 835 aa36.67■■■■□ 3.46
ESRRA-206ENST00000539594 CALD1Q05682 793 aaKnown RBP36.65■■■■□ 3.46
ESRRA-206ENST00000539594 CHL1O00533 1208 aa36.64■■■■□ 3.46
ESRRA-206ENST00000539594 TM4SF1P30408 202 aa36.64■■■■□ 3.46
ESRRA-206ENST00000539594 KIF13BQ9NQT8 1826 aa36.64■■■■□ 3.46
ESRRA-206ENST00000539594 SCN7AQ01118 1682 aa36.62■■■■□ 3.45
ESRRA-206ENST00000539594 BCL2L12Q9HB09 334 aa36.61■■■■□ 3.45
ESRRA-206ENST00000539594 TBC1D2BQ9UPU7 963 aa36.61■■■■□ 3.45
ESRRA-206ENST00000539594 CFAP44Q96MT7 982 aa36.6■■■■□ 3.45
ESRRA-206ENST00000539594 LAS1LQ9Y4W2 734 aaKnown RBP36.6■■■■□ 3.45
ESRRA-206ENST00000539594 C10orf71Q711Q0 1435 aa36.59■■■■□ 3.45
ESRRA-206ENST00000539594 NBPF26B4DH59 902 aa36.59■■■■□ 3.45
ESRRA-206ENST00000539594 DDR1Q08345 913 aa36.59■■■■□ 3.45
ESRRA-206ENST00000539594 GPR162Q16538 588 aa36.59■■■■□ 3.45
ESRRA-206ENST00000539594 NBPF10Q6P3W6 841 aaKnown RBP36.59■■■■□ 3.45
ESRRA-206ENST00000539594 DZIP3Q86Y13 1208 aaKnown RBP36.59■■■■□ 3.45
ESRRA-206ENST00000539594 NBPF15Q8N660 670 aa36.59■■■■□ 3.45
ESRRA-206ENST00000539594 POLRMTO00411 1230 aaKnown RBP36.58■■■■□ 3.45
ESRRA-206ENST00000539594 NFIXQ14938 502 aa36.58■■■■□ 3.45
ESRRA-206ENST00000539594 NCBP3Q53F19 620 aaKnown RBP36.58■■■■□ 3.45
ESRRA-206ENST00000539594 ERBB4Q15303 1308 aa36.58■■■■□ 3.45
ESRRA-206ENST00000539594 PIP4K2AP48426 406 aaPredicted RBP36.57■■■■□ 3.44
ESRRA-206ENST00000539594 TGFB2P61812 414 aa36.57■■■■□ 3.44
ESRRA-206ENST00000539594 BCORQ6W2J9 1755 aa36.56■■■■□ 3.44
ESRRA-206ENST00000539594 RGL2O15211 777 aa36.56■■■■□ 3.44
ESRRA-206ENST00000539594 CAMTA2O94983 1202 aa36.56■■■■□ 3.44
ESRRA-206ENST00000539594 CCDC27Q2M243 656 aa36.54■■■■□ 3.44
ESRRA-206ENST00000539594 IFT57Q9NWB7 429 aa36.54■■■■□ 3.44
ESRRA-206ENST00000539594 GNAI1P63096 354 aa36.53■■■■□ 3.44
ESRRA-206ENST00000539594 CLEC4GQ6UXB4 293 aa36.53■■■■□ 3.44
ESRRA-206ENST00000539594 ZNF652Q9Y2D9 606 aa36.53■■■■□ 3.44
ESRRA-206ENST00000539594 PELP1Q8IZL8 1130 aaKnown RBP36.52■■■■□ 3.44
ESRRA-206ENST00000539594 AFDNP55196 1824 aaKnown RBP36.52■■■■□ 3.44
ESRRA-206ENST00000539594 ZNF853P0CG23 659 aa36.51■■■■□ 3.44
ESRRA-206ENST00000539594 NRXN2Q9P2S2 1712 aa36.51■■■■□ 3.43
ESRRA-206ENST00000539594 GRIN3BO60391 1043 aa36.49■■■■□ 3.43
ESRRA-206ENST00000539594 SERPINB2P05120 415 aa36.49■■■■□ 3.43
ESRRA-206ENST00000539594 HOXB7P09629 217 aa36.49■■■■□ 3.43
ESRRA-206ENST00000539594 TBC1D9BQ66K14 1250 aa36.49■■■■□ 3.43
ESRRA-206ENST00000539594 BICDL1Q6ZP65 573 aa36.48■■■■□ 3.43
ESRRA-206ENST00000539594 CARMIL3Q8ND23 1372 aa36.48■■■■□ 3.43
ESRRA-206ENST00000539594 PXDNLA1KZ92 1463 aa36.48■■■■□ 3.43
ESRRA-206ENST00000539594 EIF2S2P20042 333 aaKnown RBP36.47■■■■□ 3.43
ESRRA-206ENST00000539594 SETDB2Q96T68 719 aa36.47■■■■□ 3.43
ESRRA-206ENST00000539594 MBIPQ9NS73 344 aa36.47■■■■□ 3.43
ESRRA-206ENST00000539594 KIAA1551Q9HCM1 1747 aa36.47■■■■□ 3.43
ESRRA-206ENST00000539594 CHD4Q14839 1912 aa36.46■■■■□ 3.43
ESRRA-206ENST00000539594 FAM9BQ8IZU0 186 aa36.45■■■■□ 3.43
ESRRA-206ENST00000539594 N4BP2Q86UW6 1770 aaPredicted RBP36.45■■■■□ 3.43
ESRRA-206ENST00000539594 MYL6BP14649 208 aa36.44■■■■□ 3.42
ESRRA-206ENST00000539594 ERVV-1B6SEH8 477 aa36.43■■■■□ 3.42
ESRRA-206ENST00000539594 KIF6Q6ZMV9 814 aa36.43■■■■□ 3.42
ESRRA-206ENST00000539594 WWC1Q8IX03 1113 aa36.43■■■■□ 3.42
ESRRA-206ENST00000539594 YBX3P16989 372 aaKnown RBP eCLIP36.42■■■■□ 3.42
ESRRA-206ENST00000539594 NGEFQ8N5V2 710 aa36.42■■■■□ 3.42
ESRRA-206ENST00000539594 A0A0G2JLW4 131 aa36.41■■■■□ 3.42
ESRRA-206ENST00000539594 KRT24Q2M2I5 525 aa36.41■■■■□ 3.42
ESRRA-206ENST00000539594 DPEP1P16444 411 aa36.4■■■■□ 3.42
ESRRA-206ENST00000539594 MAP3K15Q6ZN16 1313 aa36.39■■■■□ 3.42
ESRRA-206ENST00000539594 PDIA6Q15084 440 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms