RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CNTLNQ9NXG0 1405 aa6.34□□□□□ -1.39
SNHG1-208ENST00000538266 ADAMTSL3P82987 1691 aa6.34□□□□□ -1.39
SNHG1-208ENST00000538266 RIMS1Q86UR5 1692 aaKnown RBP6.34□□□□□ -1.39
SNHG1-208ENST00000538266 RAB15P59190 212 aa6.34□□□□□ -1.39
SNHG1-208ENST00000538266 LAPTM4AQ15012 233 aa6.34□□□□□ -1.39
SNHG1-208ENST00000538266 SLFNL1Q499Z3 407 aa6.34□□□□□ -1.39
SNHG1-208ENST00000538266 RNF20Q5VTR2 975 aa6.34□□□□□ -1.39
SNHG1-208ENST00000538266 CLTCQ00610 1675 aaKnown RBP6.33□□□□□ -1.4
SNHG1-208ENST00000538266 MROH1Q8NDA8 1641 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 FAM187AA6NFU0 413 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 ESPNB1AK53 854 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 NRG2O14511 850 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-208ENST00000538266 FSHRP23945 695 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 INTS6LQ5JSJ4 861 aaKnown RBP6.33□□□□□ -1.4
SNHG1-208ENST00000538266 ADAMTS19Q8TE59 1207 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 GLMNQ92990 594 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 TRIM52Q96A61 297 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 ABCC3O15438 1527 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 MROH2AA6NES4 1674 aa6.33□□□□□ -1.4
SNHG1-208ENST00000538266 NUP155O75694 1391 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 IQGAP3Q86VI3 1631 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 RAB3GAP2Q9H2M9 1393 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
SNHG1-208ENST00000538266 NNTQ13423 1086 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 PKDCCQ504Y2 493 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 SEPT12Q8IYM1 358 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 CCDC116Q8IYX3 515 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 PHTF2Q8N3S3 785 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 HPS1Q92902 700 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 PCGF6Q9BYE7 350 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 CEP152O94986 1710 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 CAMSAP1Q5T5Y3 1602 aa6.32□□□□□ -1.4
SNHG1-208ENST00000538266 TET3O43151 1660 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 PTPRMP28827 1452 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 ERVH48-1M5A8F1 160 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 DGAT1O75907 488 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 NR3C2P08235 984 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 TSGA10IPQ3SY00 556 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 CCDC125Q86Z20 511 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 RNF135Q8IUD6 432 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 VWDEQ8N2E2 1590 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 ZMYM3Q14202 1370 aa6.31□□□□□ -1.4
SNHG1-208ENST00000538266 EFCAB6Q5THR3 1501 aa6.3□□□□□ -1.4
SNHG1-208ENST00000538266 C3P01024 1663 aa6.3□□□□□ -1.4
SNHG1-208ENST00000538266 PPP1R26Q5T8A7 1209 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-208ENST00000538266 EMILIN1Q9Y6C2 1016 aa6.3□□□□□ -1.4
SNHG1-208ENST00000538266 LMTK2Q8IWU2 1503 aa6.3□□□□□ -1.4
SNHG1-208ENST00000538266 PZPP20742 1482 aa6.29□□□□□ -1.4
SNHG1-208ENST00000538266 RPRD2Q5VT52 1461 aaKnown RBP6.29□□□□□ -1.4
SNHG1-208ENST00000538266 PIK3CDO00329 1044 aa6.29□□□□□ -1.4
SNHG1-208ENST00000538266 SKIP12755 728 aa6.29□□□□□ -1.4
SNHG1-208ENST00000538266 WDR4P57081 412 aaKnown RBP6.29□□□□□ -1.4
SNHG1-208ENST00000538266 TMPRSS4Q9NRS4 437 aa6.29□□□□□ -1.4
SNHG1-208ENST00000538266 TFIP11Q9UBB9 837 aaKnown RBP6.29□□□□□ -1.4
SNHG1-208ENST00000538266 PCDHB11Q9Y5F2 797 aa6.29□□□□□ -1.4
SNHG1-208ENST00000538266 NPATQ14207 1427 aa6.28□□□□□ -1.4
SNHG1-208ENST00000538266 ARHGAP31Q2M1Z3 1444 aa6.28□□□□□ -1.4
SNHG1-208ENST00000538266 MAP7D1Q3KQU3 841 aa6.28□□□□□ -1.4
SNHG1-208ENST00000538266 ITPKCQ96DU7 683 aa6.28□□□□□ -1.4
SNHG1-208ENST00000538266 CCDC85AQ96PX6 553 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-208ENST00000538266 KLF16Q9BXK1 252 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-208ENST00000538266 PGPEP1Q9NXJ5 209 aa6.28□□□□□ -1.4
SNHG1-208ENST00000538266 E9PCH4 1651 aa6.28□□□□□ -1.4
SNHG1-208ENST00000538266 CAPN5O15484 640 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-208ENST00000538266 ZIC2O95409 532 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-208ENST00000538266 AVPP01185 164 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 CEBPAP49715 358 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-208ENST00000538266 MYT1Q01538 1121 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 USP4Q13107 963 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 TBC1D9Q6ZT07 1266 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 PLPP7Q8NBV4 271 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 CDCA7Q9BWT1 371 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-208ENST00000538266 TNRQ92752 1358 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 ERVK-7P63135 1459 aa6.27□□□□□ -1.41
SNHG1-208ENST00000538266 PREX1Q8TCU6 1659 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 PALM3A6NDB9 673 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-208ENST00000538266 TIMP2P16035 220 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 Q6ZNB5 142 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 NFATC2IPQ8NCF5 419 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 UCN2Q96RP3 112 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 MPHOSPH9Q99550 1183 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 PPP1R12CQ9BZL4 782 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 C1orf115Q9H7X2 142 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 ZFAND3Q9H8U3 227 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 CYLDQ9NQC7 956 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 SERPINA10Q9UK55 444 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 DOLKQ9UPQ8 538 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 SPATA31D1Q6ZQQ2 1576 aa6.26□□□□□ -1.41
SNHG1-208ENST00000538266 UHRF1BP1Q6BDS2 1440 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 MYO3AQ8NEV4 1616 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 SPHKAPQ2M3C7 1700 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 CFAP65Q6ZU64 1925 aaKnown RBP6.25□□□□□ -1.41
SNHG1-208ENST00000538266 AXIN1O15169 862 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 ATP9BO43861 1147 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 LZTS3O60299 673 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-208ENST00000538266 LMOD1P29536 600 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-208ENST00000538266 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
SNHG1-208ENST00000538266 CTC1Q2NKJ3 1217 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 OXLD1Q5BKU9 147 aa6.25□□□□□ -1.41
SNHG1-208ENST00000538266 CC2D2BQ6DHV5 1058 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms