RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 NLGN2Q8NFZ4 835 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 CARD14Q9BXL6 1004 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 GZF1Q9H116 711 aaPredicted RBP7.11□□□□□ -1.27
CHD4-206ENST00000536999 ATP6V1DQ9Y5K8 247 aa7.11□□□□□ -1.27
CHD4-206ENST00000536999 KIF3CO14782 793 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 TRIM27P14373 513 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 TMPOP42166 694 aaKnown RBP7.1□□□□□ -1.27
CHD4-206ENST00000536999 ANAPC15P60006 121 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 CHRNA2Q15822 529 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 KIAA1211Q6ZU35 1233 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 WAPLQ7Z5K2 1190 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 SMAP1Q8IYB5 467 aaPredicted RBP7.1□□□□□ -1.27
CHD4-206ENST00000536999 PROM2Q8N271 834 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 INTS4Q96HW7 963 aaKnown RBP7.1□□□□□ -1.27
CHD4-206ENST00000536999 ZNF692Q9BU19 519 aaPredicted RBP7.1□□□□□ -1.27
CHD4-206ENST00000536999 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 STK26Q9P289 416 aa7.1□□□□□ -1.27
CHD4-206ENST00000536999 ADCY9O60503 1353 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 GOLGA6L6A8MZA4 724 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 DIAPH1O60610 1272 aaKnown RBP7.09□□□□□ -1.27
CHD4-206ENST00000536999 BAG4O95429 457 aaKnown RBP7.09□□□□□ -1.27
CHD4-206ENST00000536999 TXNRD1Q16881 649 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 SASS6Q6UVJ0 657 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 PDCL2Q8N4E4 241 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 PDLIM2Q96JY6 352 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 DIAPH3Q9NSV4 1193 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 IFT57Q9NWB7 429 aa7.09□□□□□ -1.27
CHD4-206ENST00000536999 KIAA0232Q92628 1395 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 TOMM70O94826 608 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 FAM193AP78312 1265 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 HTRA3P83110 453 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 DHX8Q14562 1220 aaKnown RBP7.08□□□□□ -1.28
CHD4-206ENST00000536999 NEUROD2Q15784 382 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 CFAP70Q5T0N1 1121 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 SRCIN1Q9C0H9 1055 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 NOB1Q9ULX3 412 aaKnown RBP7.08□□□□□ -1.28
CHD4-206ENST00000536999 ZKSCAN5Q9Y2L8 839 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 SSH2Q76I76 1423 aa7.08□□□□□ -1.28
CHD4-206ENST00000536999 PCNTO95613 3336 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 FMN2Q9NZ56 1722 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 SOS1Q07889 1333 aaPredicted RBP7.07□□□□□ -1.28
CHD4-206ENST00000536999 HSPA1AP0DMV8 641 aaKnown RBP7.07□□□□□ -1.28
CHD4-206ENST00000536999 HSPA1BP0DMV9 641 aaKnown RBP7.07□□□□□ -1.28
CHD4-206ENST00000536999 RLBP1P12271 317 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 RIPK4P57078 832 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 EXOSC9Q06265 439 aaKnown RBP7.07□□□□□ -1.28
CHD4-206ENST00000536999 UTP14CQ5TAP6 766 aaKnown RBP7.07□□□□□ -1.28
CHD4-206ENST00000536999 LRSAM1Q6UWE0 723 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 PTF1AQ7RTS3 328 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 SSH1Q8WYL5 1049 aa7.07□□□□□ -1.28
CHD4-206ENST00000536999 GTPBP4Q9BZE4 634 aaKnown RBP7.07□□□□□ -1.28
CHD4-206ENST00000536999 PTPRCP08575 1304 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 ZBTB7BO15156 539 aaPredicted RBP7.06□□□□□ -1.28
CHD4-206ENST00000536999 KIF20AO95235 890 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 CAVIN2O95810 425 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 PTMAP06454 111 aaKnown RBP7.06□□□□□ -1.28
CHD4-206ENST00000536999 ZC3H6P61129 1189 aaKnown RBP7.06□□□□□ -1.28
CHD4-206ENST00000536999 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
CHD4-206ENST00000536999 SKAP1Q86WV1 359 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 PLEKHF1Q96S99 279 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 PANK2Q9BZ23 570 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 DCTPP1Q9H773 170 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 HDAC5Q9UQL6 1122 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 THRAP3Q9Y2W1 955 aaKnown RBP7.06□□□□□ -1.28
CHD4-206ENST00000536999 KIF1BO60333 1816 aa7.06□□□□□ -1.28
CHD4-206ENST00000536999 WDR90Q96KV7 1748 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 TNS2Q63HR2 1409 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
CHD4-206ENST00000536999 ERC2O15083 957 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 ZSCAN23Q3MJ62 389 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 TBC1D9Q6ZT07 1266 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 CREBRFQ8IUR6 639 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 TMEM57Q8N5G2 664 aa7.05□□□□□ -1.28
CHD4-206ENST00000536999 WDR33Q9C0J8 1336 aaKnown RBP7.04□□□□□ -1.28
CHD4-206ENST00000536999 CYP2E1P05181 493 aaPredicted RBP7.04□□□□□ -1.28
CHD4-206ENST00000536999 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 DDB1Q16531 1140 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 CAVIN1Q6NZI2 390 aaKnown RBP7.04□□□□□ -1.28
CHD4-206ENST00000536999 C16orf71Q8IYS4 520 aaPredicted RBP7.04□□□□□ -1.28
CHD4-206ENST00000536999 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 CHMP4CQ96CF2 233 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 RBM42Q9BTD8 480 aaKnown RBP7.04□□□□□ -1.28
CHD4-206ENST00000536999 LNPKQ9C0E8 428 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 SLC12A5Q9H2X9 1139 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 TSPY26PQ9H489 355 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 OSBPL3Q9H4L5 887 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 USP25Q9UHP3 1055 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 CLTCL1P53675 1640 aa7.04□□□□□ -1.28
CHD4-206ENST00000536999 ABCC4O15439 1325 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 ADGRF5Q8IZF2 1346 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD4-206ENST00000536999 SYCP1Q15431 976 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 DNTTIP2Q5QJE6 756 aaKnown RBP7.03□□□□□ -1.28
CHD4-206ENST00000536999 TTC22Q5TAA0 569 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 SPRYD3Q8NCJ5 442 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 FEZ1Q99689 392 aa7.03□□□□□ -1.28
CHD4-206ENST00000536999 CCDC94Q9BW85 323 aaPredicted RBP7.03□□□□□ -1.28
CHD4-206ENST00000536999 USP26Q9BXU7 913 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms