RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 PDIA6Q15084 440 aa22.68■■□□□ 1.22
HTATSF1-204ENST00000535601 PPP1R42Q7Z4L9 355 aa22.68■■□□□ 1.22
HTATSF1-204ENST00000535601 COL5A2P05997 1499 aaPredicted RBP22.67■■□□□ 1.22
HTATSF1-204ENST00000535601 HOXB7P09629 217 aa22.67■■□□□ 1.22
HTATSF1-204ENST00000535601 ATP8B2P98198 1209 aa22.67■■□□□ 1.22
HTATSF1-204ENST00000535601 TTC5Q8N0Z6 440 aa22.67■■□□□ 1.22
HTATSF1-204ENST00000535601 HEG1Q9ULI3 1381 aa22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 TTC22Q5TAA0 569 aa22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 DCAF5Q96JK2 942 aa22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 ZCRB1Q8TBF4 217 aaKnown RBP22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 BTG4Q9NY30 223 aa22.66■■□□□ 1.22
HTATSF1-204ENST00000535601 SRGAP3O43295 1099 aa22.65■■□□□ 1.22
HTATSF1-204ENST00000535601 XAGE3Q8WTP9 111 aa22.65■■□□□ 1.22
HTATSF1-204ENST00000535601 TBC1D2Q9BYX2 928 aa22.64■■□□□ 1.22
HTATSF1-204ENST00000535601 SDSP20132 328 aa22.64■■□□□ 1.21
HTATSF1-204ENST00000535601 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
HTATSF1-204ENST00000535601 COPS6Q7L5N1 327 aa22.63■■□□□ 1.21
HTATSF1-204ENST00000535601 C9orf78Q9NZ63 289 aaPredicted RBP22.63■■□□□ 1.21
HTATSF1-204ENST00000535601 NUTM1Q86Y26 1132 aa22.63■■□□□ 1.21
HTATSF1-204ENST00000535601 ABCA3Q99758 1704 aa22.63■■□□□ 1.21
HTATSF1-204ENST00000535601 KSR2Q6VAB6 950 aa22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.62■■□□□ 1.212e-7■■■■■ 37.7
HTATSF1-204ENST00000535601 OVOS2A0A0G2JMS6 1433 aa22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 RIC3Q7Z5B4 369 aa22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 RBM42Q9BTD8 480 aaKnown RBP22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 DDX21Q9NR30 783 aaKnown RBP eCLIP22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 PA2G4Q9UQ80 394 aaKnown RBP22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
HTATSF1-204ENST00000535601 IL2RBP14784 551 aa22.61■■□□□ 1.21
HTATSF1-204ENST00000535601 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
HTATSF1-204ENST00000535601 MAP4K4O95819 1239 aaPredicted RBP22.61■■□□□ 1.21
HTATSF1-204ENST00000535601 PDE1AP54750 535 aa22.6■■□□□ 1.21
HTATSF1-204ENST00000535601 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
HTATSF1-204ENST00000535601 CDC45O75419 566 aa22.59■■□□□ 1.21
HTATSF1-204ENST00000535601 ADAMTS2O95450 1211 aa22.59■■□□□ 1.21
HTATSF1-204ENST00000535601 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
HTATSF1-204ENST00000535601 PKD1L3Q7Z443 1732 aa22.59■■□□□ 1.21
HTATSF1-204ENST00000535601 PXDNLA1KZ92 1463 aa22.59■■□□□ 1.21
HTATSF1-204ENST00000535601 MYD88Q99836 296 aa22.59■■□□□ 1.21
HTATSF1-204ENST00000535601 ATP5J2-PTCD1G3V325 749 aa22.58■■□□□ 1.21
HTATSF1-204ENST00000535601 IGKV5-2P06315 115 aa22.58■■□□□ 1.21
HTATSF1-204ENST00000535601 DEKP35659 375 aaKnown RBP22.58■■□□□ 1.21
HTATSF1-204ENST00000535601 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.21
HTATSF1-204ENST00000535601 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 FMNL2Q96PY5 1086 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 IBTKQ9P2D0 1353 aaPredicted RBP22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 N4BP2Q86UW6 1770 aaPredicted RBP22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 PIP4K2BP78356 416 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 KLHDC4Q8TBB5 520 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 CARD10Q9BWT7 1032 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 SSH3Q8TE77 659 aa22.57■■□□□ 1.2
HTATSF1-204ENST00000535601 SUCLG2Q96I99 432 aa22.56■■□□□ 1.2
HTATSF1-204ENST00000535601 NHSL1Q5SYE7 1610 aa22.56■■□□□ 1.2
HTATSF1-204ENST00000535601 A1BGP04217 495 aa22.56■■□□□ 1.2
HTATSF1-204ENST00000535601 UNC5CLQ8IV45 518 aa22.56■■□□□ 1.2
HTATSF1-204ENST00000535601 A0A0G2JS52 829 aa22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 BECN1Q14457 450 aa22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 RILPL2Q969X0 211 aa22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 ROBO1Q9Y6N7 1651 aa22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 CD2BP2O95400 341 aaKnown RBP22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 MX1P20591 662 aa22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 OS9Q13438 667 aaPredicted RBP22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 KAZALD1Q96I82 304 aa22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.55■■□□□ 1.2
HTATSF1-204ENST00000535601 TRIM6-TRIM34B2RNG4 842 aa22.54■■□□□ 1.2
HTATSF1-204ENST00000535601 SIL1Q9H173 461 aa22.54■■□□□ 1.2
HTATSF1-204ENST00000535601 BICC1Q9H694 974 aaKnown RBP22.54■■□□□ 1.2
HTATSF1-204ENST00000535601 NUTM2BA6NNL0 878 aaPredicted RBP22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 NUTM2EB1AL46 878 aaPredicted RBP22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 HSP90AB1P08238 724 aaKnown RBP22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 NUTM2AQ8IVF1 878 aaPredicted RBP22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 KIF2CQ99661 725 aa22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 FOXD4L1Q9NU39 408 aa22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 NBPF26B4DH59 902 aa22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 NBPF14Q5TI25 921 aa22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 NBPF10Q6P3W6 841 aaKnown RBP22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 NBPF15Q8N660 670 aa22.53■■□□□ 1.2
HTATSF1-204ENST00000535601 POLA2Q14181 598 aa22.52■■□□□ 1.2
HTATSF1-204ENST00000535601 LRP10Q7Z4F1 713 aa22.52■■□□□ 1.2
HTATSF1-204ENST00000535601 GRM8O00222 908 aa22.52■■□□□ 1.2
HTATSF1-204ENST00000535601 DDX58O95786 925 aaKnown RBP22.52■■□□□ 1.2
HTATSF1-204ENST00000535601 EPHA10Q5JZY3 1008 aa22.52■■□□□ 1.2
HTATSF1-204ENST00000535601 RHPN1Q8TCX5 695 aa22.52■■□□□ 1.2
HTATSF1-204ENST00000535601 NFKBIBQ15653 356 aa22.52■■□□□ 1.19
HTATSF1-204ENST00000535601 TTLL7Q6ZT98 887 aa22.52■■□□□ 1.19
HTATSF1-204ENST00000535601 ANKRD13DQ6ZTN6 518 aa22.52■■□□□ 1.19
HTATSF1-204ENST00000535601 LINS1Q8NG48 757 aa22.51■■□□□ 1.19
HTATSF1-204ENST00000535601 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
HTATSF1-204ENST00000535601 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
HTATSF1-204ENST00000535601 ASAP1Q9ULH1 1129 aa22.51■■□□□ 1.19
HTATSF1-204ENST00000535601 SALL3Q9BXA9 1300 aa22.51■■□□□ 1.19
HTATSF1-204ENST00000535601 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
HTATSF1-204ENST00000535601 NEURL1BA8MQ27 555 aa22.5■■□□□ 1.19
HTATSF1-204ENST00000535601 ARXQ96QS3 562 aa22.5■■□□□ 1.19
HTATSF1-204ENST00000535601 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
HTATSF1-204ENST00000535601 RBM25P49756 843 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms