RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 FCHSD2O94868 740 aa11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 STARD3NLO95772 234 aa11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 TGFB2P61812 414 aa11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 DDR1Q08345 913 aa11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 ZNF790Q6PG37 636 aa11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 RTF1Q92541 710 aaKnown RBP11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 HEG1Q9ULI3 1381 aa11.37□□□□□ -0.59
SFSWAP-202ENST00000535202 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 DPEP1P16444 411 aa11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 MCM10Q7L590 875 aa11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 FMNL2Q96PY5 1086 aa11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-202ENST00000535202 DLG5Q8TDM6 1919 aa11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 KCNQ3O43525 872 aa11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 NEFMP07197 916 aa11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 DCTN1Q14203 1278 aa11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 NARFQ9UHQ1 456 aa11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 AFDNP55196 1824 aaKnown RBP11.35□□□□□ -0.59
SFSWAP-202ENST00000535202 POLRMTO00411 1230 aaKnown RBP11.34□□□□□ -0.59
SFSWAP-202ENST00000535202 TM4SF1P30408 202 aa11.34□□□□□ -0.59
SFSWAP-202ENST00000535202 TEX13AQ9BXU3 409 aaPredicted RBP11.34□□□□□ -0.59
SFSWAP-202ENST00000535202 ATP10DQ9P241 1426 aa11.34□□□□□ -0.59
SFSWAP-202ENST00000535202 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 A0A087WZG4 1122 aa11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 EIF5P55010 431 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 NFIXQ14938 502 aa11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-202ENST00000535202 ARFGEF1Q9Y6D6 1849 aa11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 ANP32EQ9BTT0 268 aa11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
SFSWAP-202ENST00000535202 ADCY9O60503 1353 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 A1BGP04217 495 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 SERPINB2P05120 415 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 KCNA3P22001 575 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 CHRNA5P30532 468 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 RALBP1Q15311 655 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 ZNF526Q8TF50 670 aaPredicted RBP11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 PLEKHF1Q96S99 279 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 TBC1D2BQ9UPU7 963 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 BCORQ6W2J9 1755 aa11.31□□□□□ -0.6
SFSWAP-202ENST00000535202 SNRPA1P09661 255 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 DALRD3Q5D0E6 543 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 KDM3BQ7LBC6 1761 aa11.3□□□□□ -0.6
SFSWAP-202ENST00000535202 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 MIS18AQ9NYP9 233 aa11.29□□□□□ -0.6
SFSWAP-202ENST00000535202 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
SFSWAP-202ENST00000535202 CAMTA2O94983 1202 aa11.28□□□□□ -0.6
SFSWAP-202ENST00000535202 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-202ENST00000535202 THUMPD2Q9BTF0 503 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-202ENST00000535202 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-202ENST00000535202 ANKRD31Q8N7Z5 1873 aa11.27□□□□□ -0.6
SFSWAP-202ENST00000535202 PNISRQ8TF01 805 aaKnown RBP11.27□□□□□ -0.61
SFSWAP-202ENST00000535202 SENP3-EIF4A1A0A087X0R7 540 aa11.26□□□□□ -0.61
SFSWAP-202ENST00000535202 NPHP1O15259 732 aa11.26□□□□□ -0.61
SFSWAP-202ENST00000535202 C2CD5Q86YS7 1000 aa11.26□□□□□ -0.61
SFSWAP-202ENST00000535202 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
SFSWAP-202ENST00000535202 H0YIN7 160 aa11.25□□□□□ -0.61
SFSWAP-202ENST00000535202 C9orf131Q5VYM1 1079 aa11.25□□□□□ -0.61
SFSWAP-202ENST00000535202 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
SFSWAP-202ENST00000535202 SETDB2Q96T68 719 aa11.25□□□□□ -0.61
SFSWAP-202ENST00000535202 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
SFSWAP-202ENST00000535202 CACNA1SQ13698 1873 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 RIPK4P57078 832 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 CCDC146Q8IYE0 955 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
SFSWAP-202ENST00000535202 SBF1O95248 1867 aa11.23□□□□□ -0.61
SFSWAP-202ENST00000535202 PDE6BP35913 854 aa11.23□□□□□ -0.61
SFSWAP-202ENST00000535202 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
SFSWAP-202ENST00000535202 ST5P78524 1137 aa11.23□□□□□ -0.61
SFSWAP-202ENST00000535202 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms