RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 ABL2P42684 1182 aa8.94□□□□□ -0.98
TNFRSF1A-206ENST00000535038 EFHC2Q5JST6 749 aa8.94□□□□□ -0.98
TNFRSF1A-206ENST00000535038 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
TNFRSF1A-206ENST00000535038 CC2D2AQ9P2K1 1620 aa8.94□□□□□ -0.98
TNFRSF1A-206ENST00000535038 WASHC4Q2M389 1173 aa8.93□□□□□ -0.98
TNFRSF1A-206ENST00000535038 UBAP2LQ14157 1087 aaKnown RBP8.92□□□□□ -0.98
TNFRSF1A-206ENST00000535038 DCAF5Q96JK2 942 aa8.92□□□□□ -0.98
TNFRSF1A-206ENST00000535038 GDF10P55107 478 aa8.91□□□□□ -0.98
TNFRSF1A-206ENST00000535038 MAP7D1Q3KQU3 841 aa8.91□□□□□ -0.98
TNFRSF1A-206ENST00000535038 CCER1Q8TC90 406 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-206ENST00000535038 KLRG1Q96E93 195 aa8.91□□□□□ -0.98
TNFRSF1A-206ENST00000535038 ATXN7L1Q9ULK2 861 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-206ENST00000535038 ARHGAP35Q9NRY4 1499 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 INHAP05111 366 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 SCNN1DP51172 638 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 PLPP7Q8NBV4 271 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 ABHD17AQ96GS6 310 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 CRISPLD1Q9H336 500 aa8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 GDF2Q9UK05 429 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-206ENST00000535038 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
TNFRSF1A-206ENST00000535038 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
TNFRSF1A-206ENST00000535038 GALNT6Q8NCL4 622 aa8.89□□□□□ -0.99
TNFRSF1A-206ENST00000535038 MAP3K1Q13233 1512 aa8.89□□□□□ -0.99
TNFRSF1A-206ENST00000535038 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SHISA8B8ZZ34 492 aa8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 BMP4P12644 408 aa8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 FGFR3P22607 806 aa8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SOX11P35716 441 aa8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 GOLGA6L1Q8N7Z2 621 aa8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 CUX2O14529 1486 aa8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-206ENST00000535038 DNMBPQ6XZF7 1577 aa8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 BNIP3LO60238 219 aa8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 MCM6Q14566 821 aa8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 EDARADDQ8WWZ3 215 aa8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 NDFIP2Q9NV92 336 aa8.87□□□□□ -0.99
TNFRSF1A-206ENST00000535038 MSTNO14793 375 aa8.86□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SMTNP53814 917 aa8.86□□□□□ -0.99
TNFRSF1A-206ENST00000535038 FIGNL1Q6PIW4 674 aa8.86□□□□□ -0.99
TNFRSF1A-206ENST00000535038 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
TNFRSF1A-206ENST00000535038 MKL2Q9ULH7 1088 aa8.86□□□□□ -0.99
TNFRSF1A-206ENST00000535038 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 C2CD2LO14523 706 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 ATP4AP20648 1035 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 AIDAQ96BJ3 306 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 RRAGCQ9HB90 399 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SERTAD1Q9UHV2 236 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 ABCA10Q8WWZ4 1543 aa8.85□□□□□ -0.99
TNFRSF1A-206ENST00000535038 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 CTBSQ01459 385 aa8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 NLRP8Q86W28 1048 aa8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 DNAAF2Q9NVR5 837 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-206ENST00000535038 TMEM229AB2RXF0 380 aa8.83□□□□□ -1
TNFRSF1A-206ENST00000535038 AMPD1P23109 780 aa8.83□□□□□ -1
TNFRSF1A-206ENST00000535038 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
TNFRSF1A-206ENST00000535038 GGA1Q9UJY5 639 aa8.83□□□□□ -1
TNFRSF1A-206ENST00000535038 PCDHGC4Q9Y5F7 938 aa8.83□□□□□ -1
TNFRSF1A-206ENST00000535038 TOPBP1Q92547 1522 aa8.82□□□□□ -1
TNFRSF1A-206ENST00000535038 ITGB2P05107 769 aa8.82□□□□□ -1
TNFRSF1A-206ENST00000535038 ARSJQ5FYB0 599 aaPredicted RBP8.82□□□□□ -1
TNFRSF1A-206ENST00000535038 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
TNFRSF1A-206ENST00000535038 TIAM1Q13009 1591 aa8.82□□□□□ -1
TNFRSF1A-206ENST00000535038 TTBK1Q5TCY1 1321 aaPredicted RBP8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 A6NJY4 79 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 PIK3CDO00329 1044 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 MTFR1Q15390 333 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 EML3Q32P44 896 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 COG6Q9Y2V7 657 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 CARMIL1Q5VZK9 1371 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 CUL7Q14999 1698 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 CFAP43Q8NDM7 1665 aa8.81□□□□□ -1
TNFRSF1A-206ENST00000535038 CLSPNQ9HAW4 1339 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 A0A1W2PNR3 127 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 CDK2AP1O14519 115 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 PROCP04070 461 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 ARAFP10398 606 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 TATP17735 454 aaPredicted RBP8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 ALYREFQ86V81 257 aaKnown RBP8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 ZNF295-AS1Q8N0V1 137 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 CABP1Q9NZU7 370 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 IQSEC3Q9UPP2 1182 aaPredicted RBP8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 PCDHGA11Q9Y5H2 935 aa8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 POLA1P09884 1462 aaPredicted RBP8.8□□□□□ -1
TNFRSF1A-206ENST00000535038 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
TNFRSF1A-206ENST00000535038 NEURL1BA8MQ27 555 aa8.79□□□□□ -1
TNFRSF1A-206ENST00000535038 EPXP11678 715 aa8.79□□□□□ -1
TNFRSF1A-206ENST00000535038 SKIP12755 728 aa8.79□□□□□ -1
TNFRSF1A-206ENST00000535038 ZDHHC3Q9NYG2 299 aa8.79□□□□□ -1
TNFRSF1A-206ENST00000535038 NOD1Q9Y239 953 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms