RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 NARFQ9UHQ1 456 aa11.3□□□□□ -0.6
RPUSD4-209ENST00000534393 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 KIF3CO14782 793 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 KCNA3P22001 575 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 DDR1Q08345 913 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 TEFQ10587 303 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 USPL1Q5W0Q7 1092 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 KCPQ6ZWJ8 1503 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
RPUSD4-209ENST00000534393 COL15A1P39059 1388 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 CCDC88AQ3V6T2 1871 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 A0A087WZG4 1122 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 GNAT3A8MTJ3 354 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 TOMM70O94826 608 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
RPUSD4-209ENST00000534393 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
RPUSD4-209ENST00000534393 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 NFIXQ14938 502 aa11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 C9orf131Q5VYM1 1079 aa11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 ZNF790Q6PG37 636 aa11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 NPM2Q86SE8 214 aaKnown RBP11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 ZBTB1Q9Y2K1 713 aa11.26□□□□□ -0.61
RPUSD4-209ENST00000534393 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 SERPINB2P05120 415 aa11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 CANXP27824 592 aaKnown RBP11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 CHRNA5P30532 468 aa11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 APLP1P51693 650 aa11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 EIF5P55010 431 aaKnown RBP11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 C16orf71Q8IYS4 520 aaPredicted RBP11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 ZC3H4Q9UPT8 1303 aaKnown RBP11.25□□□□□ -0.61
RPUSD4-209ENST00000534393 H0YIN7 160 aa11.24□□□□□ -0.61
RPUSD4-209ENST00000534393 FMNL2Q96PY5 1086 aa11.24□□□□□ -0.61
RPUSD4-209ENST00000534393 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
RPUSD4-209ENST00000534393 HEG1Q9ULI3 1381 aa11.24□□□□□ -0.61
RPUSD4-209ENST00000534393 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 CNGB1Q14028 1251 aaPredicted RBP11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 CEMIPQ8WUJ3 1361 aa11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
RPUSD4-209ENST00000534393 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
RPUSD4-209ENST00000534393 SCN7AQ01118 1682 aa11.22□□□□□ -0.61
RPUSD4-209ENST00000534393 FSTL1Q12841 308 aa11.22□□□□□ -0.61
RPUSD4-209ENST00000534393 C2CD5Q86YS7 1000 aa11.22□□□□□ -0.61
RPUSD4-209ENST00000534393 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
RPUSD4-209ENST00000534393 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.61
RPUSD4-209ENST00000534393 LMNB1P20700 586 aa11.21□□□□□ -0.61
RPUSD4-209ENST00000534393 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
RPUSD4-209ENST00000534393 PDE6BP35913 854 aa11.21□□□□□ -0.61
RPUSD4-209ENST00000534393 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
RPUSD4-209ENST00000534393 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
RPUSD4-209ENST00000534393 CARMIL3Q8ND23 1372 aa11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 HTATSF1O43719 755 aaKnown RBP11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 FER1L6Q2WGJ9 1857 aa11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
RPUSD4-209ENST00000534393 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 NPHP1O15259 732 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 NEFMP07197 916 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 TBC1D9BQ66K14 1250 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
RPUSD4-209ENST00000534393 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 DLG5Q8TDM6 1919 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 RGL2O15211 777 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 A1BGP04217 495 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 SNRPA1P09661 255 aaKnown RBP11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 PPP2R1AP30153 589 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 CLEC4GQ6UXB4 293 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 ZNF622Q969S3 477 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 RRAGCQ9HB90 399 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 ARFGEF2Q9Y6D5 1785 aa11.18□□□□□ -0.62
RPUSD4-209ENST00000534393 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 ST5P78524 1137 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 PRR5LQ6MZQ0 368 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 DZIP3Q86Y13 1208 aaKnown RBP11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 CNBD1Q8NA66 436 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 SMC1BQ8NDV3 1235 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 CNKSR1Q969H4 720 aa11.17□□□□□ -0.62
RPUSD4-209ENST00000534393 COL11A2P13942 1736 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms