RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 USPL1Q5W0Q7 1092 aa26.51■■□□□ 1.83
NDUFS3-212ENST00000534208 NARFQ9UHQ1 456 aa26.51■■□□□ 1.83
NDUFS3-212ENST00000534208 BCS1LQ9Y276 419 aa26.51■■□□□ 1.83
NDUFS3-212ENST00000534208 POLRMTO00411 1230 aaKnown RBP26.5■■□□□ 1.83
NDUFS3-212ENST00000534208 KCNA3P22001 575 aa26.5■■□□□ 1.83
NDUFS3-212ENST00000534208 PRKAR2BP31323 418 aa26.5■■□□□ 1.83
NDUFS3-212ENST00000534208 PHACTR3Q96KR7 559 aa26.5■■□□□ 1.83
NDUFS3-212ENST00000534208 GPBP1L1Q9HC44 474 aaPredicted RBP26.5■■□□□ 1.83
NDUFS3-212ENST00000534208 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
NDUFS3-212ENST00000534208 ZNF790Q6PG37 636 aa26.49■■□□□ 1.83
NDUFS3-212ENST00000534208 SENP3-EIF4A1A0A087X0R7 540 aa26.48■■□□□ 1.83
NDUFS3-212ENST00000534208 STARD3NLO95772 234 aa26.48■■□□□ 1.83
NDUFS3-212ENST00000534208 ZNF496Q96IT1 587 aaPredicted RBP26.48■■□□□ 1.83
NDUFS3-212ENST00000534208 HEG1Q9ULI3 1381 aa26.46■■□□□ 1.83
NDUFS3-212ENST00000534208 ARFGEF1Q9Y6D6 1849 aa26.46■■□□□ 1.83
NDUFS3-212ENST00000534208 FCHSD2O94868 740 aa26.46■■□□□ 1.83
NDUFS3-212ENST00000534208 TEX13AQ9BXU3 409 aaPredicted RBP26.46■■□□□ 1.83
NDUFS3-212ENST00000534208 BCL2L12Q9HB09 334 aa26.45■■□□□ 1.82
NDUFS3-212ENST00000534208 PIM2Q9P1W9 311 aa26.45■■□□□ 1.82
NDUFS3-212ENST00000534208 CANXP27824 592 aaKnown RBP26.44■■□□□ 1.82
NDUFS3-212ENST00000534208 EIF5P55010 431 aaKnown RBP26.44■■□□□ 1.82
NDUFS3-212ENST00000534208 NFIXQ14938 502 aa26.44■■□□□ 1.82
NDUFS3-212ENST00000534208 NRXN2Q9P2S2 1712 aa26.43■■□□□ 1.82
NDUFS3-212ENST00000534208 U2AF1L5P0DN76 240 aaPredicted RBP26.43■■□□□ 1.82
NDUFS3-212ENST00000534208 U2AF1Q01081 240 aaKnown RBP eCLIP26.43■■□□□ 1.82
NDUFS3-212ENST00000534208 AFDNP55196 1824 aaKnown RBP26.42■■□□□ 1.82
NDUFS3-212ENST00000534208 A0A087WZG4 1122 aa26.42■■□□□ 1.82
NDUFS3-212ENST00000534208 ARHGAP27Q6ZUM4 889 aa26.42■■□□□ 1.82
NDUFS3-212ENST00000534208 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
NDUFS3-212ENST00000534208 FMNL2Q96PY5 1086 aa26.42■■□□□ 1.82
NDUFS3-212ENST00000534208 DALRD3Q5D0E6 543 aaKnown RBP26.41■■□□□ 1.82
NDUFS3-212ENST00000534208 BTBD11A6QL63 1104 aa26.39■■□□□ 1.82
NDUFS3-212ENST00000534208 CHRNA5P30532 468 aa26.39■■□□□ 1.82
NDUFS3-212ENST00000534208 IL6STP40189 918 aaPredicted RBP26.38■■□□□ 1.81
NDUFS3-212ENST00000534208 SERPINB2P05120 415 aa26.37■■□□□ 1.81
NDUFS3-212ENST00000534208 SCN7AQ01118 1682 aa26.36■■□□□ 1.81
NDUFS3-212ENST00000534208 KCNQ3O43525 872 aa26.36■■□□□ 1.81
NDUFS3-212ENST00000534208 HTATSF1O43719 755 aaKnown RBP26.36■■□□□ 1.81
NDUFS3-212ENST00000534208 RTF1Q92541 710 aaKnown RBP26.36■■□□□ 1.81
NDUFS3-212ENST00000534208 CEP350Q5VT06 3117 aa26.34■■□□□ 1.81
NDUFS3-212ENST00000534208 DLEC1Q9Y238 1755 aa26.33■■□□□ 1.81
NDUFS3-212ENST00000534208 KIF3CO14782 793 aa26.33■■□□□ 1.81
NDUFS3-212ENST00000534208 MCM10Q7L590 875 aa26.33■■□□□ 1.81
NDUFS3-212ENST00000534208 A1BGP04217 495 aa26.32■■□□□ 1.8
NDUFS3-212ENST00000534208 C9orf131Q5VYM1 1079 aa26.31■■□□□ 1.8
NDUFS3-212ENST00000534208 TBC1D2BQ9UPU7 963 aa26.31■■□□□ 1.8
NDUFS3-212ENST00000534208 TBC1D9BQ66K14 1250 aa26.3■■□□□ 1.8
NDUFS3-212ENST00000534208 BICDL1Q6ZP65 573 aa26.3■■□□□ 1.8
NDUFS3-212ENST00000534208 ZNF330Q9Y3S2 320 aaPredicted RBP26.3■■□□□ 1.8
NDUFS3-212ENST00000534208 CARMIL3Q8ND23 1372 aa26.3■■□□□ 1.8
NDUFS3-212ENST00000534208 NPM2Q86SE8 214 aaKnown RBP26.29■■□□□ 1.8
NDUFS3-212ENST00000534208 USP16Q9Y5T5 823 aa26.29■■□□□ 1.8
NDUFS3-212ENST00000534208 CAMTA2O94983 1202 aa26.28■■□□□ 1.8
NDUFS3-212ENST00000534208 SNRPA1P09661 255 aaKnown RBP26.28■■□□□ 1.8
NDUFS3-212ENST00000534208 DCTN1Q14203 1278 aa26.28■■□□□ 1.8
NDUFS3-212ENST00000534208 C2CD5Q86YS7 1000 aa26.27■■□□□ 1.8
NDUFS3-212ENST00000534208 SBF1O95248 1867 aa26.26■■□□□ 1.79
NDUFS3-212ENST00000534208 BCORQ6W2J9 1755 aa26.26■■□□□ 1.79
NDUFS3-212ENST00000534208 H0YIN7 160 aa26.26■■□□□ 1.79
NDUFS3-212ENST00000534208 TTLL6Q8N841 843 aa26.26■■□□□ 1.79
NDUFS3-212ENST00000534208 PDZRN3Q9UPQ7 1066 aa26.26■■□□□ 1.79
NDUFS3-212ENST00000534208 ANKRD31Q8N7Z5 1873 aa26.25■■□□□ 1.79
NDUFS3-212ENST00000534208 PRAMEF22A3QJZ6 481 aa26.25■■□□□ 1.79
NDUFS3-212ENST00000534208 NEFMP07197 916 aa26.25■■□□□ 1.79
NDUFS3-212ENST00000534208 HSPA6P17066 643 aa26.25■■□□□ 1.79
NDUFS3-212ENST00000534208 TAF7Q15545 349 aaPredicted RBP26.25■■□□□ 1.79
NDUFS3-212ENST00000534208 BRIP1Q9BX63 1249 aa26.25■■□□□ 1.79
NDUFS3-212ENST00000534208 PRR5LQ6MZQ0 368 aa26.24■■□□□ 1.79
NDUFS3-212ENST00000534208 DZIP3Q86Y13 1208 aaKnown RBP26.24■■□□□ 1.79
NDUFS3-212ENST00000534208 PLEKHF1Q96S99 279 aa26.24■■□□□ 1.79
NDUFS3-212ENST00000534208 RNF181Q9P0P0 153 aa26.24■■□□□ 1.79
NDUFS3-212ENST00000534208 DLG5Q8TDM6 1919 aa26.24■■□□□ 1.79
NDUFS3-212ENST00000534208 SETDB2Q96T68 719 aa26.23■■□□□ 1.79
NDUFS3-212ENST00000534208 PDE6BP35913 854 aa26.22■■□□□ 1.79
NDUFS3-212ENST00000534208 NMRK2Q9NPI5 230 aa26.22■■□□□ 1.79
NDUFS3-212ENST00000534208 TOMM70O94826 608 aa26.21■■□□□ 1.79
NDUFS3-212ENST00000534208 CLEC4GQ6UXB4 293 aa26.21■■□□□ 1.79
NDUFS3-212ENST00000534208 ZC3H4Q9UPT8 1303 aaKnown RBP26.2■■□□□ 1.79
NDUFS3-212ENST00000534208 RGL2O15211 777 aa26.2■■□□□ 1.78
NDUFS3-212ENST00000534208 PIP4K2AP48426 406 aaPredicted RBP26.2■■□□□ 1.78
NDUFS3-212ENST00000534208 KDM2BQ8NHM5 1336 aa26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 NBPF26B4DH59 902 aa26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 NFE2L2Q16236 605 aa26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 NBPF10Q6P3W6 841 aaKnown RBP26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 NBPF15Q8N660 670 aa26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 CNBD1Q8NA66 436 aa26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 PNNQ9H307 717 aaKnown RBP26.19■■□□□ 1.78
NDUFS3-212ENST00000534208 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
NDUFS3-212ENST00000534208 COL11A2P13942 1736 aaPredicted RBP26.18■■□□□ 1.78
NDUFS3-212ENST00000534208 RASSF7Q02833 373 aa26.18■■□□□ 1.78
NDUFS3-212ENST00000534208 LAMB4A4D0S4 1761 aa26.18■■□□□ 1.78
NDUFS3-212ENST00000534208 LMNB1P20700 586 aa26.17■■□□□ 1.78
NDUFS3-212ENST00000534208 RALBP1Q15311 655 aa26.17■■□□□ 1.78
NDUFS3-212ENST00000534208 MIS18AQ9NYP9 233 aa26.17■■□□□ 1.78
NDUFS3-212ENST00000534208 ZNF652Q9Y2D9 606 aa26.17■■□□□ 1.78
NDUFS3-212ENST00000534208 ST5P78524 1137 aa26.16■■□□□ 1.78
NDUFS3-212ENST00000534208 CCDC24Q8N4L8 307 aa26.16■■□□□ 1.78
NDUFS3-212ENST00000534208 ZNF622Q969S3 477 aaKnown RBP eCLIP26.15■■□□□ 1.78
NDUFS3-212ENST00000534208 MAPK8IP3Q9UPT6 1336 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms