RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 STAP2Q9UGK3 403 aa4.73□□□□□ -1.65
SOX6-217ENST00000533870 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.73□□□□□ -1.65
SOX6-217ENST00000533870 RGS12O14924 1447 aa4.73□□□□□ -1.65
SOX6-217ENST00000533870 DNMT1P26358 1616 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 AMPHP49418 695 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 SART3Q15020 963 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 IMMTQ16891 758 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 PPP4R3BQ5MIZ7 849 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 CCDC51Q96ER9 411 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 UTP14AQ9BVJ6 771 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 SPTLC3Q9NUV7 552 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 SLC4A10Q6U841 1118 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 FSD1Q9BTV5 496 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 RBM28Q9NW13 759 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 EID1Q9Y6B2 187 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 KIF14Q15058 1648 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 A2MP01023 1474 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 TTC21AQ8NDW8 1320 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 ARHGAP6O43182 974 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 TSR2Q969E8 191 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 CLSTN2Q9H4D0 955 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 C9orf78Q9NZ63 289 aaPredicted RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 RBM27Q9P2N5 1060 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 DNAI1Q9UI46 699 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 CPSF1Q10570 1443 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 A0A1W2PQ27 194 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 A0A1W2PQ64 194 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 A0A1W2PQD8 194 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 YEATS4O95619 227 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 CYP2E1P05181 493 aaPredicted RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 CDC25BP30305 580 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 PRIM1P49642 420 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 CKAP4Q07065 602 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 ARHGAP29Q52LW3 1261 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 SARM1Q6SZW1 724 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 BRAPQ7Z569 592 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 PPFIBP1Q86W92 1011 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 POTEDQ86YR6 584 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 PLEKHM2Q8IWE5 1019 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 CTAGE1Q96RT6 745 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 KDM5BQ9UGL1 1544 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 CCDC196A0A1B0GTZ2 297 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 SKILP12757 684 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 RBM10P98175 930 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 LMNB2Q03252 620 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 SNW1Q13573 536 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 ARHGAP5Q13017 1502 aa4.72□□□□□ -1.65
SOX6-217ENST00000533870 ZFYP08048 801 aaPredicted RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 MRPS27Q92552 414 aaKnown RBP4.72□□□□□ -1.65
SOX6-217ENST00000533870 PPP2R5BQ15173 497 aa4.71□□□□□ -1.65
SOX6-217ENST00000533870 CCDC186Q7Z3E2 898 aa4.71□□□□□ -1.65
SOX6-217ENST00000533870 CRACR2AQ9BSW2 395 aa4.71□□□□□ -1.65
SOX6-217ENST00000533870 CEP131Q9UPN4 1083 aa4.71□□□□□ -1.65
SOX6-217ENST00000533870 ABCA5Q8WWZ7 1642 aa4.71□□□□□ -1.65
SOX6-217ENST00000533870 ARHGEF5Q12774 1597 aa4.71□□□□□ -1.65
SOX6-217ENST00000533870 KIF5CO60282 957 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 IGSF3O75054 1194 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 GIGYF1O75420 1035 aaPredicted RBP4.71□□□□□ -1.66
SOX6-217ENST00000533870 SLC4A2P04920 1241 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 ETF1P62495 437 aaKnown RBP4.71□□□□□ -1.66
SOX6-217ENST00000533870 FAM160A1Q05DH4 1040 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 LUZP1Q86V48 1076 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 TRIM22Q8IYM9 498 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 ZNF592Q92610 1267 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 H0YHG0 523 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 AKAP17AQ02040 695 aaKnown RBP4.71□□□□□ -1.66
SOX6-217ENST00000533870 CEP135Q66GS9 1140 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 NAA15Q9BXJ9 866 aaKnown RBP4.71□□□□□ -1.66
SOX6-217ENST00000533870 MYO1AQ9UBC5 1043 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 CLGNO14967 610 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 HCLS1P14317 486 aaPredicted RBP4.71□□□□□ -1.66
SOX6-217ENST00000533870 SDSP20132 328 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 HSPA4P34932 840 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 SEMA3FQ13275 785 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 PLEKHO1Q53GL0 409 aaPredicted RBP4.71□□□□□ -1.66
SOX6-217ENST00000533870 RBSNQ9H1K0 784 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 SENP3-EIF4A1A0A087X0R7 540 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 DDIT3P35638 169 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 TRIM14Q14142 442 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 EXOC4Q96A65 974 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 MED4Q9NPJ6 270 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 FANCAO15360 1455 aa4.71□□□□□ -1.66
SOX6-217ENST00000533870 A0A1B0GUL7 405 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 HDGFL1Q5TGJ6 251 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 SMARCC1Q92922 1105 aaPredicted RBP4.7□□□□□ -1.66
SOX6-217ENST00000533870 MTA3Q9BTC8 594 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 URB2Q14146 1524 aaKnown RBP4.7□□□□□ -1.66
SOX6-217ENST00000533870 NESP48681 1621 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 APBB1O00213 710 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 CHL1O00533 1208 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 RLBP1P12271 317 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 STIM1Q13586 685 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 CCDC148Q8NFR7 591 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 GOLGA6L10A0A0M3HER8 536 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 SYT1P21579 422 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 TXLNAP40222 546 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 TYRO3Q06418 890 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 UHRF1BP1LA0JNW5 1464 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 ABCC10Q5T3U5 1492 aa4.7□□□□□ -1.66
SOX6-217ENST00000533870 PIP4K2BP78356 416 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms