RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FILIP1Q7Z7B0 1213 aa20.63■□□□□ 0.89
PHRF1-205ENST00000533464 KRT18P05783 430 aaKnown RBP20.63■□□□□ 0.89
PHRF1-205ENST00000533464 PIBF1Q8WXW3 757 aa20.63■□□□□ 0.89
PHRF1-205ENST00000533464 CCP110O43303 1012 aa20.63■□□□□ 0.89
PHRF1-205ENST00000533464 GPTP24298 496 aa20.63■□□□□ 0.89
PHRF1-205ENST00000533464 SCAND2PQ9GZW5 306 aaPredicted RBP20.63■□□□□ 0.89
PHRF1-205ENST00000533464 ZNF652Q9Y2D9 606 aa20.63■□□□□ 0.89
PHRF1-205ENST00000533464 RHPN1Q8TCX5 695 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 SDSP20132 328 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 ANKRD44Q8N8A2 993 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 WASF1Q92558 559 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 CHPF2Q9P2E5 772 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 ADAMTS2O95450 1211 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 NAPBQ9H115 298 aa20.62■□□□□ 0.89
PHRF1-205ENST00000533464 MINDY4BA8MYZ0 360 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 HSP90AB3PQ58FF7 597 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 TSPYL6Q8N831 410 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 ARHGEF12Q9NZN5 1544 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 MTERF4Q7Z6M4 381 aaKnown RBP20.61■□□□□ 0.89
PHRF1-205ENST00000533464 JARID2Q92833 1246 aaPredicted RBP20.61■□□□□ 0.89
PHRF1-205ENST00000533464 PHACTR3Q96KR7 559 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 HSP90B2PQ58FF3 399 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 CT47A1Q5JQC4 288 aaPredicted RBP20.61■□□□□ 0.89
PHRF1-205ENST00000533464 HMGB1P09429 215 aaKnown RBP20.61■□□□□ 0.89
PHRF1-205ENST00000533464 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
PHRF1-205ENST00000533464 MAP7D2Q96T17 732 aa20.61■□□□□ 0.89
PHRF1-205ENST00000533464 VAMP4O75379 141 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 RUFY1Q96T51 708 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 ABCC10Q5T3U5 1492 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 PPFIBP1Q86W92 1011 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 GOLIM4O00461 696 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 GUCY1B3Q02153 619 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
PHRF1-205ENST00000533464 MAP3K12Q12852 859 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 STIM1Q13586 685 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 MTHFSDQ2M296 383 aaKnown RBP20.59■□□□□ 0.89
PHRF1-205ENST00000533464 GDPD2Q9HCC8 539 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 CAVIN4Q5BKX8 364 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 CADPS2Q86UW7 1296 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 ACBD3Q9H3P7 528 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 CWC25Q9NXE8 425 aaPredicted RBP20.59■□□□□ 0.89
PHRF1-205ENST00000533464 ZNF213O14771 459 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 RBM5P52756 815 aaKnown RBP eCLIP20.59■□□□□ 0.891e-6■■□□□ 13.2
PHRF1-205ENST00000533464 PDE1AP54750 535 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
PHRF1-205ENST00000533464 A0A1W2PP64 1363 aa20.58■□□□□ 0.89
PHRF1-205ENST00000533464 DHX8Q14562 1220 aaKnown RBP20.58■□□□□ 0.89
PHRF1-205ENST00000533464 EXOC5O00471 708 aa20.58■□□□□ 0.89
PHRF1-205ENST00000533464 RBM10P98175 930 aaKnown RBP20.58■□□□□ 0.89
PHRF1-205ENST00000533464 C8orf76Q96K31 380 aa20.58■□□□□ 0.89
PHRF1-205ENST00000533464 CCDC183Q5T5S1 534 aa20.58■□□□□ 0.88
PHRF1-205ENST00000533464 KRT24Q2M2I5 525 aa20.58■□□□□ 0.88
PHRF1-205ENST00000533464 C8orf34Q49A92 452 aa20.58■□□□□ 0.88
PHRF1-205ENST00000533464 LDHAL6AQ6ZMR3 332 aa20.58■□□□□ 0.88
PHRF1-205ENST00000533464 ZNHIT6Q9NWK9 470 aaKnown RBP20.57■□□□□ 0.88
PHRF1-205ENST00000533464 EIF2AK4Q9P2K8 1649 aaKnown RBP20.57■□□□□ 0.88
PHRF1-205ENST00000533464 ZSCAN30Q86W11 494 aa20.57■□□□□ 0.88
PHRF1-205ENST00000533464 ZHX3Q9H4I2 956 aa20.57■□□□□ 0.88
PHRF1-205ENST00000533464 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 CBFA2T2O43439 604 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 ZSCAN29Q8IWY8 852 aaPredicted RBP20.56■□□□□ 0.88
PHRF1-205ENST00000533464 CCDC82Q8N4S0 544 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 CCDC112Q8NEF3 446 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
PHRF1-205ENST00000533464 CCT2P78371 535 aaKnown RBP20.56■□□□□ 0.88
PHRF1-205ENST00000533464 C16orf71Q8IYS4 520 aaPredicted RBP20.56■□□□□ 0.88
PHRF1-205ENST00000533464 NCKAP5LQ9HCH0 1330 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 ZPR1O75312 459 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 SLC39A6Q13433 755 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 PRM3Q9NNZ6 103 aa20.56■□□□□ 0.88
PHRF1-205ENST00000533464 SLC5A1P13866 664 aa20.55■□□□□ 0.88
PHRF1-205ENST00000533464 NPATQ14207 1427 aa20.55■□□□□ 0.88
PHRF1-205ENST00000533464 FAM177A1Q8N128 213 aaPredicted RBP20.55■□□□□ 0.88
PHRF1-205ENST00000533464 STX6O43752 255 aa20.55■□□□□ 0.88
PHRF1-205ENST00000533464 XAGE3Q8WTP9 111 aa20.55■□□□□ 0.88
PHRF1-205ENST00000533464 AK7Q96M32 723 aa20.55■□□□□ 0.88
PHRF1-205ENST00000533464 TEX13AQ9BXU3 409 aaPredicted RBP20.55■□□□□ 0.88
PHRF1-205ENST00000533464 GJB2P29033 226 aa20.54■□□□□ 0.88
PHRF1-205ENST00000533464 COPS6Q7L5N1 327 aa20.54■□□□□ 0.88
PHRF1-205ENST00000533464 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
PHRF1-205ENST00000533464 TFIP11Q9UBB9 837 aaKnown RBP20.54■□□□□ 0.88
PHRF1-205ENST00000533464 COL17A1Q9UMD9 1497 aaPredicted RBP20.54■□□□□ 0.88
PHRF1-205ENST00000533464 SMTNL1A8MU46 457 aa20.54■□□□□ 0.88
PHRF1-205ENST00000533464 ZBTB40Q9NUA8 1239 aa20.54■□□□□ 0.88
PHRF1-205ENST00000533464 CCDC196A0A1B0GTZ2 297 aa20.53■□□□□ 0.88
PHRF1-205ENST00000533464 PPP1R1BQ9UD71 204 aaPredicted RBP20.53■□□□□ 0.88
PHRF1-205ENST00000533464 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
PHRF1-205ENST00000533464 UHRF1BP1Q6BDS2 1440 aa20.53■□□□□ 0.88
PHRF1-205ENST00000533464 FLT4P35916 1363 aa20.53■□□□□ 0.88
PHRF1-205ENST00000533464 SSBP05455 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
PHRF1-205ENST00000533464 AKAP4Q5JQC9 854 aa20.53■□□□□ 0.88
PHRF1-205ENST00000533464 TMX3Q96JJ7 454 aa20.53■□□□□ 0.88
PHRF1-205ENST00000533464 GOLGA8BA8MQT2 603 aa20.52■□□□□ 0.88
PHRF1-205ENST00000533464 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
PHRF1-205ENST00000533464 USP5P45974 858 aa20.52■□□□□ 0.88
PHRF1-205ENST00000533464 LRRC59Q96AG4 307 aaKnown RBP20.52■□□□□ 0.88
PHRF1-205ENST00000533464 ODF2Q5BJF6 829 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms