RNA–Protein interactions for RNA: ENST00000532838.1

CKLF-CMTM1-204, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF-CMTM1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-204ENST00000532838 COL24A1Q17RW2 1714 aa26.49■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 SNRPA1P09661 255 aaKnown RBP26.49■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 INTS5Q6P9B9 1019 aaKnown RBP26.49■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 THUMPD2Q9BTF0 503 aaKnown RBP26.49■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 KCNQ3O43525 872 aa26.48■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 NLGN1Q8N2Q7 840 aa26.48■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 FHDC1Q9C0D6 1143 aaPredicted RBP26.48■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 ZPR1O75312 459 aa26.47■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 CANXP27824 592 aaKnown RBP26.46■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 MIS18AQ9NYP9 233 aa26.46■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 ZBTB1Q9Y2K1 713 aa26.46■■□□□ 1.83
CKLF-CMTM1-204ENST00000532838 BABAM1Q9NWV8 329 aa26.45■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 TSPYL4Q9UJ04 414 aa26.45■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 SOS1Q07889 1333 aaPredicted RBP26.44■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 A0A087WZG4 1122 aa26.44■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 CCDC184Q52MB2 194 aa26.44■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 COL15A1P39059 1388 aa26.44■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 SYT17Q9BSW7 474 aa26.43■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 ZNF330Q9Y3S2 320 aaPredicted RBP26.43■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 C4AP0C0L4 1744 aa26.42■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 APAF1O14727 1248 aa26.42■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 KDM3BQ7LBC6 1761 aa26.42■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 USP42Q9H9J4 1324 aaKnown RBP26.41■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 CALD1Q05682 793 aaKnown RBP26.41■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 GYS1P13807 737 aa26.4■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 IL6STP40189 918 aaPredicted RBP26.4■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 MMP10P09238 476 aa26.39■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 TRIM35Q9UPQ4 493 aa26.39■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
CKLF-CMTM1-204ENST00000532838 EIF4A1P60842 406 aaKnown RBP26.38■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 SRP68Q9UHB9 627 aaKnown RBP26.38■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 NARFQ9UHQ1 456 aa26.38■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 USP16Q9Y5T5 823 aa26.38■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 PARP3Q9Y6F1 533 aa26.38■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 A1BGP04217 495 aa26.37■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 EIF5P55010 431 aaKnown RBP26.36■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 USPL1Q5W0Q7 1092 aa26.36■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 CD2APQ9Y5K6 639 aa26.36■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 LAMB4A4D0S4 1761 aa26.35■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 PRAMEF22A3QJZ6 481 aa26.34■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 GIGYF1O75420 1035 aaPredicted RBP26.34■■□□□ 1.81
CKLF-CMTM1-204ENST00000532838 FKBP8Q14318 412 aa26.32■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 FAM9BQ8IZU0 186 aa26.32■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 CFAP44Q96MT7 982 aa26.32■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 CHL1O00533 1208 aa26.31■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 GNAI1P63096 354 aa26.31■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 DZIP3Q86Y13 1208 aaKnown RBP26.3■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 TBC1D2BQ9UPU7 963 aa26.3■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 PIP4K2AP48426 406 aaPredicted RBP26.28■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 IFT57Q9NWB7 429 aa26.28■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 ZNF652Q9Y2D9 606 aa26.28■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 PELP1Q8IZL8 1130 aaKnown RBP26.27■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 ERBB4Q15303 1308 aa26.27■■□□□ 1.8
CKLF-CMTM1-204ENST00000532838 GPR162Q16538 588 aa26.26■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 CCDC27Q2M243 656 aa26.26■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NLGN2Q8NFZ4 835 aa26.26■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 EIF2S2P20042 333 aaKnown RBP26.25■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NCBP3Q53F19 620 aaKnown RBP26.25■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 SCN7AQ01118 1682 aa26.25■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NBPF26B4DH59 902 aa26.24■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 TM4SF1P30408 202 aa26.24■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NBPF10Q6P3W6 841 aaKnown RBP26.24■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NBPF15Q8N660 670 aa26.24■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 MYL6BP14649 208 aa26.23■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NFIXQ14938 502 aa26.23■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 KIF6Q6ZMV9 814 aa26.23■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 BICDL1Q6ZP65 573 aa26.23■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 MBIPQ9NS73 344 aa26.23■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 POLRMTO00411 1230 aaKnown RBP26.22■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NPHP1O15259 732 aa26.22■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 HOXB7P09629 217 aa26.22■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 DDR1Q08345 913 aa26.22■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 NGEFQ8N5V2 710 aa26.22■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 BCL2L12Q9HB09 334 aa26.22■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 CAMTA2O94983 1202 aa26.21■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 TGFB2P61812 414 aa26.21■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 CLEC4GQ6UXB4 293 aa26.21■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 SETDB2Q96T68 719 aa26.21■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 C10orf71Q711Q0 1435 aa26.21■■□□□ 1.79
CKLF-CMTM1-204ENST00000532838 RGL2O15211 777 aa26.2■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 WWC1Q8IX03 1113 aa26.2■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 CHMP4AQ9BY43 222 aa26.2■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 CARMIL3Q8ND23 1372 aa26.2■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 SENP3-EIF4A1A0A087X0R7 540 aa26.19■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 CCER2I3L3R5 266 aa26.19■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 SERPINB2P05120 415 aa26.19■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 ZNF853P0CG23 659 aa26.19■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 BCORQ6W2J9 1755 aa26.19■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 HDGFL1Q5TGJ6 251 aa26.18■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 TBC1D9BQ66K14 1250 aa26.18■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 DIEXFQ68CQ4 756 aaKnown RBP26.18■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 KIF13BQ9NQT8 1826 aa26.18■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 NECTIN2Q92692 538 aa26.17■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 GRIN3BO60391 1043 aa26.16■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 DUSP27Q5VZP5 1158 aa26.16■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 IL16Q14005 1332 aa26.15■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 ERVV-1B6SEH8 477 aa26.15■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 KRT24Q2M2I5 525 aa26.15■■□□□ 1.78
CKLF-CMTM1-204ENST00000532838 MAP3K15Q6ZN16 1313 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms