RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 ZPR1O75312 459 aa23.05■■□□□ 1.28
RPUSD4-207ENST00000532800 TM4SF1P30408 202 aa23.05■■□□□ 1.28
RPUSD4-207ENST00000532800 KIF3CO14782 793 aa23.04■■□□□ 1.28
RPUSD4-207ENST00000532800 CHRNA5P30532 468 aa23.03■■□□□ 1.28
RPUSD4-207ENST00000532800 PIM2Q9P1W9 311 aa23.03■■□□□ 1.28
RPUSD4-207ENST00000532800 VSIG10Q8N0Z9 540 aa23.02■■□□□ 1.28
RPUSD4-207ENST00000532800 NARFQ9UHQ1 456 aa23.02■■□□□ 1.28
RPUSD4-207ENST00000532800 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
RPUSD4-207ENST00000532800 NFIXQ14938 502 aa23.01■■□□□ 1.27
RPUSD4-207ENST00000532800 IL17REQ8NFR9 667 aa23.01■■□□□ 1.27
RPUSD4-207ENST00000532800 BCL2L12Q9HB09 334 aa23.01■■□□□ 1.27
RPUSD4-207ENST00000532800 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
RPUSD4-207ENST00000532800 DALRD3Q5D0E6 543 aaKnown RBP23■■□□□ 1.27
RPUSD4-207ENST00000532800 TTC5Q8N0Z6 440 aa23■■□□□ 1.27
RPUSD4-207ENST00000532800 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
RPUSD4-207ENST00000532800 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
RPUSD4-207ENST00000532800 HSPA6P17066 643 aa22.98■■□□□ 1.27
RPUSD4-207ENST00000532800 TEFQ10587 303 aa22.98■■□□□ 1.27
RPUSD4-207ENST00000532800 C9orf131Q5VYM1 1079 aa22.98■■□□□ 1.27
RPUSD4-207ENST00000532800 ZNF496Q96IT1 587 aaPredicted RBP22.98■■□□□ 1.27
RPUSD4-207ENST00000532800 HEG1Q9ULI3 1381 aa22.97■■□□□ 1.27
RPUSD4-207ENST00000532800 DLEC1Q9Y238 1755 aa22.96■■□□□ 1.27
RPUSD4-207ENST00000532800 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
RPUSD4-207ENST00000532800 ZNF790Q6PG37 636 aa22.96■■□□□ 1.27
RPUSD4-207ENST00000532800 PHACTR3Q96KR7 559 aa22.96■■□□□ 1.27
RPUSD4-207ENST00000532800 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
RPUSD4-207ENST00000532800 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
RPUSD4-207ENST00000532800 STARD3NLO95772 234 aa22.95■■□□□ 1.26
RPUSD4-207ENST00000532800 EIF5P55010 431 aaKnown RBP22.95■■□□□ 1.26
RPUSD4-207ENST00000532800 CARMIL3Q8ND23 1372 aa22.95■■□□□ 1.26
RPUSD4-207ENST00000532800 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
RPUSD4-207ENST00000532800 NMRK2Q9NPI5 230 aa22.95■■□□□ 1.26
RPUSD4-207ENST00000532800 SBF1O95248 1867 aa22.94■■□□□ 1.26
RPUSD4-207ENST00000532800 SERPINB2P05120 415 aa22.94■■□□□ 1.26
RPUSD4-207ENST00000532800 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
RPUSD4-207ENST00000532800 KCNQ3O43525 872 aa22.92■■□□□ 1.26
RPUSD4-207ENST00000532800 BICDL1Q6ZP65 573 aa22.92■■□□□ 1.26
RPUSD4-207ENST00000532800 RNF181Q9P0P0 153 aa22.92■■□□□ 1.26
RPUSD4-207ENST00000532800 ZNF330Q9Y3S2 320 aaPredicted RBP22.91■■□□□ 1.26
RPUSD4-207ENST00000532800 ANKRD31Q8N7Z5 1873 aa22.91■■□□□ 1.26
RPUSD4-207ENST00000532800 PPP2R1AP30153 589 aa22.9■■□□□ 1.26
RPUSD4-207ENST00000532800 RASSF7Q02833 373 aa22.9■■□□□ 1.26
RPUSD4-207ENST00000532800 TBC1D9BQ66K14 1250 aa22.9■■□□□ 1.26
RPUSD4-207ENST00000532800 FMNL2Q96PY5 1086 aa22.9■■□□□ 1.26
RPUSD4-207ENST00000532800 A0A087WZG4 1122 aa22.89■■□□□ 1.25
RPUSD4-207ENST00000532800 TBC1D2BQ9UPU7 963 aa22.89■■□□□ 1.25
RPUSD4-207ENST00000532800 BTBD11A6QL63 1104 aa22.88■■□□□ 1.25
RPUSD4-207ENST00000532800 TOMM70O94826 608 aa22.88■■□□□ 1.25
RPUSD4-207ENST00000532800 A1BGP04217 495 aa22.88■■□□□ 1.25
RPUSD4-207ENST00000532800 TEX13AQ9BXU3 409 aaPredicted RBP22.88■■□□□ 1.25
RPUSD4-207ENST00000532800 COL11A2P13942 1736 aaPredicted RBP22.88■■□□□ 1.25
RPUSD4-207ENST00000532800 BCORQ6W2J9 1755 aa22.87■■□□□ 1.25
RPUSD4-207ENST00000532800 U2AF1L5P0DN76 240 aaPredicted RBP22.87■■□□□ 1.25
RPUSD4-207ENST00000532800 U2AF1Q01081 240 aaKnown RBP eCLIP22.87■■□□□ 1.25
RPUSD4-207ENST00000532800 C2CD5Q86YS7 1000 aa22.87■■□□□ 1.25
RPUSD4-207ENST00000532800 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
RPUSD4-207ENST00000532800 IL6STP40189 918 aaPredicted RBP22.86■■□□□ 1.25
RPUSD4-207ENST00000532800 MCM10Q7L590 875 aa22.85■■□□□ 1.25
RPUSD4-207ENST00000532800 CCDC24Q8N4L8 307 aa22.85■■□□□ 1.25
RPUSD4-207ENST00000532800 TNRC6CQ9HCJ0 1690 aaKnown RBP22.84■■□□□ 1.25
RPUSD4-207ENST00000532800 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
RPUSD4-207ENST00000532800 PIP4K2AP48426 406 aaPredicted RBP22.84■■□□□ 1.25
RPUSD4-207ENST00000532800 PRELPP51888 382 aa22.84■■□□□ 1.25
RPUSD4-207ENST00000532800 TTLL6Q8N841 843 aa22.84■■□□□ 1.25
RPUSD4-207ENST00000532800 CCDC88AQ3V6T2 1871 aa22.83■■□□□ 1.25
RPUSD4-207ENST00000532800 TIAM2Q8IVF5 1701 aa22.83■■□□□ 1.25
RPUSD4-207ENST00000532800 H0YIN7 160 aa22.83■■□□□ 1.25
RPUSD4-207ENST00000532800 CAMTA2O94983 1202 aa22.83■■□□□ 1.25
RPUSD4-207ENST00000532800 DCTN1Q14203 1278 aa22.83■■□□□ 1.25
RPUSD4-207ENST00000532800 USP16Q9Y5T5 823 aa22.83■■□□□ 1.25
RPUSD4-207ENST00000532800 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
RPUSD4-207ENST00000532800 PRR5LQ6MZQ0 368 aa22.82■■□□□ 1.24
RPUSD4-207ENST00000532800 APLP1P51693 650 aa22.81■■□□□ 1.24
RPUSD4-207ENST00000532800 RTF1Q92541 710 aaKnown RBP22.81■■□□□ 1.24
RPUSD4-207ENST00000532800 NFKBIEO00221 500 aa22.8■■□□□ 1.24
RPUSD4-207ENST00000532800 DZIP3Q86Y13 1208 aaKnown RBP22.8■■□□□ 1.24
RPUSD4-207ENST00000532800 C16orf71Q8IYS4 520 aaPredicted RBP22.8■■□□□ 1.24
RPUSD4-207ENST00000532800 RBM46Q8TBY0 533 aaKnown RBP22.8■■□□□ 1.24
RPUSD4-207ENST00000532800 RRAGCQ9HB90 399 aa22.8■■□□□ 1.24
RPUSD4-207ENST00000532800 WDR90Q96KV7 1748 aa22.79■■□□□ 1.24
RPUSD4-207ENST00000532800 CACNA1SQ13698 1873 aa22.79■■□□□ 1.24
RPUSD4-207ENST00000532800 LMNB1P20700 586 aa22.79■■□□□ 1.24
RPUSD4-207ENST00000532800 NPM2Q86SE8 214 aaKnown RBP22.79■■□□□ 1.24
RPUSD4-207ENST00000532800 ZNF622Q969S3 477 aaKnown RBP eCLIP22.79■■□□□ 1.24
RPUSD4-207ENST00000532800 BRIP1Q9BX63 1249 aa22.79■■□□□ 1.24
RPUSD4-207ENST00000532800 DLG5Q8TDM6 1919 aa22.78■■□□□ 1.24
RPUSD4-207ENST00000532800 SETDB2Q96T68 719 aa22.78■■□□□ 1.24
RPUSD4-207ENST00000532800 PDE6BP35913 854 aa22.77■■□□□ 1.24
RPUSD4-207ENST00000532800 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
RPUSD4-207ENST00000532800 ZNF219Q9P2Y4 722 aaPredicted RBP22.77■■□□□ 1.24
RPUSD4-207ENST00000532800 ZC3H4Q9UPT8 1303 aaKnown RBP22.77■■□□□ 1.24
RPUSD4-207ENST00000532800 FER1L6Q2WGJ9 1857 aa22.77■■□□□ 1.24
RPUSD4-207ENST00000532800 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
RPUSD4-207ENST00000532800 LAMB4A4D0S4 1761 aa22.75■■□□□ 1.23
RPUSD4-207ENST00000532800 SLX4Q8IY92 1834 aa22.75■■□□□ 1.23
RPUSD4-207ENST00000532800 ARFGEF2Q9Y6D5 1785 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 NBPF26B4DH59 902 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 NPHP1O15259 732 aa22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
RPUSD4-207ENST00000532800 C21orf2O43822 256 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms