RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 OS9Q13438 667 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 SPC24Q8NBT2 197 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 TSC1Q92574 1164 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 AFF2P51816 1311 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 FAM193AP78312 1265 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 NFE2L2Q16236 605 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.11
TGFBR3-209ENST00000532540 C1orf167Q5SNV9 1468 aa8.09□□□□□ -1.11
TGFBR3-209ENST00000532540 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
TGFBR3-209ENST00000532540 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
TGFBR3-209ENST00000532540 NINLQ9Y2I6 1382 aa8.09□□□□□ -1.11
TGFBR3-209ENST00000532540 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
TGFBR3-209ENST00000532540 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-209ENST00000532540 MNS1Q8NEH6 495 aa8.09□□□□□ -1.12
TGFBR3-209ENST00000532540 TMEM51Q9NW97 253 aa8.09□□□□□ -1.12
TGFBR3-209ENST00000532540 PIK3R4Q99570 1358 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 SLC4A2P04920 1241 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 RABEP1Q15276 862 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 FLT4P35916 1363 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 C3P01024 1663 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 USP6P35125 1406 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 RAB3GAP1Q15042 981 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 TWISTNBQ3B726 338 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 ANKRD45Q5TZF3 282 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 SMIM5Q71RC9 77 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 IFNL2Q8IZJ0 200 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 LNPKQ9C0E8 428 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 ANTXR1Q9H6X2 564 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 TOMM22Q9NS69 142 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 USP25Q9UHP3 1055 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 SBNO2Q9Y2G9 1366 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 EDC4Q6P2E9 1401 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 GOLGA6L19H0YKK7 550 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 IL13P35225 146 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 USP8P40818 1118 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 BANK1Q8NDB2 785 aa8.08□□□□□ -1.12
TGFBR3-209ENST00000532540 ZNF622Q969S3 477 aaKnown RBP eCLIP8.08□□□□□ -1.124e-6■■□□□ 13.5
TGFBR3-209ENST00000532540 SOCS7O14512 581 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 TRIM37O94972 964 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 IGHDP01880 384 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 GNAI1P63096 354 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 RIC3Q7Z5B4 369 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 SECISBP2LQ93073 1101 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 F6X3S4 739 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 KCNQ3O43525 872 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 TNNT1P13805 278 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 CREBRFQ8IUR6 639 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 SPINK5Q9NQ38 1064 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 FAM135BQ49AJ0 1406 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 VWDEQ8N2E2 1590 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 DZIP1LQ8IYY4 767 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 TXLNBQ8N3L3 684 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 CCDC24Q8N4L8 307 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 DDX19BQ9UMR2 479 aa8.07□□□□□ -1.12
TGFBR3-209ENST00000532540 TMEM131LA2VDJ0 1609 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 ZBTB22O15209 634 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 GPTP24298 496 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 MYCBPQ99417 103 aaPredicted RBP8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 ZBTB3Q9H5J0 574 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 TTC12Q9H892 705 aaPredicted RBP8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 RSPH14Q9UHP6 348 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 MROH2AA6NES4 1674 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 ARHGEF10O15013 1369 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 ZNF445P59923 1031 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 HOMER1Q86YM7 354 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 SMC5Q8IY18 1101 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 C10orf67Q8IYJ2 551 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 RBM27Q9P2N5 1060 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 ZNF219Q9P2Y4 722 aaPredicted RBP8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 RDXP35241 583 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 PIBF1Q8WXW3 757 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 TRIM5Q9C035 493 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 ASXL1Q8IXJ9 1541 aa8.06□□□□□ -1.12
TGFBR3-209ENST00000532540 TDO2P48775 406 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 IRX5P78411 483 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 DUSP27Q5VZP5 1158 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 SEPT12Q8IYM1 358 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 POLR3GO15318 223 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 ADCY5O95622 1261 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 UVSSAQ2YD98 709 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 CCAR2Q8N163 923 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 TSPYL6Q8N831 410 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 C16orf45Q96MC5 204 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 BCCIPQ9P287 314 aaKnown RBP eCLIP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 KCNQ2O43526 872 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 REC8O95072 547 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 RXRBP28702 533 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 HSP90B2PQ58FF3 399 aa8.05□□□□□ -1.12
TGFBR3-209ENST00000532540 SNX21Q969T3 373 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms