RNA–Protein interactions for RNA: ENST00000531593.1

GPAA1-216, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-216ENST00000531593 COL15A1P39059 1388 aa21.94■■□□□ 1.1
GPAA1-216ENST00000531593 KCNQ3O43525 872 aa21.93■■□□□ 1.1
GPAA1-216ENST00000531593 VIRMAQ69YN4 1812 aaKnown RBP21.93■■□□□ 1.1
GPAA1-216ENST00000531593 ZNF790Q6PG37 636 aa21.93■■□□□ 1.1
GPAA1-216ENST00000531593 ZNF330Q9Y3S2 320 aaPredicted RBP21.93■■□□□ 1.1
GPAA1-216ENST00000531593 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
GPAA1-216ENST00000531593 POLRMTO00411 1230 aaKnown RBP21.92■■□□□ 1.1
GPAA1-216ENST00000531593 FCHSD2O94868 740 aa21.92■■□□□ 1.1
GPAA1-216ENST00000531593 SENP3-EIF4A1A0A087X0R7 540 aa21.91■■□□□ 1.1
GPAA1-216ENST00000531593 TM4SF1P30408 202 aa21.91■■□□□ 1.1
GPAA1-216ENST00000531593 NARFQ9UHQ1 456 aa21.91■■□□□ 1.1
GPAA1-216ENST00000531593 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 KIAA1551Q9HCM1 1747 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 STARD3NLO95772 234 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 CHRNA5P30532 468 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 DCTN1Q14203 1278 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 NFIXQ14938 502 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 ARHGAP27Q6ZUM4 889 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 MCM10Q7L590 875 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
GPAA1-216ENST00000531593 KCNA3P22001 575 aa21.89■■□□□ 1.09
GPAA1-216ENST00000531593 BICDL1Q6ZP65 573 aa21.89■■□□□ 1.09
GPAA1-216ENST00000531593 FMNL2Q96PY5 1086 aa21.89■■□□□ 1.09
GPAA1-216ENST00000531593 GPBP1L1Q9HC44 474 aaPredicted RBP21.89■■□□□ 1.09
GPAA1-216ENST00000531593 CEMIPQ8WUJ3 1361 aa21.88■■□□□ 1.09
GPAA1-216ENST00000531593 KIF13BQ9NQT8 1826 aa21.88■■□□□ 1.09
GPAA1-216ENST00000531593 RTF1Q92541 710 aaKnown RBP21.88■■□□□ 1.09
GPAA1-216ENST00000531593 ADCY9O60503 1353 aa21.87■■□□□ 1.09
GPAA1-216ENST00000531593 A1BGP04217 495 aa21.87■■□□□ 1.09
GPAA1-216ENST00000531593 EIF5P55010 431 aaKnown RBP21.86■■□□□ 1.09
GPAA1-216ENST00000531593 PIM2Q9P1W9 311 aa21.86■■□□□ 1.09
GPAA1-216ENST00000531593 UBR2Q8IWV8 1755 aa21.86■■□□□ 1.09
GPAA1-216ENST00000531593 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
GPAA1-216ENST00000531593 SERPINB2P05120 415 aa21.85■■□□□ 1.09
GPAA1-216ENST00000531593 PIP4K2AP48426 406 aaPredicted RBP21.85■■□□□ 1.09
GPAA1-216ENST00000531593 TBC1D2BQ9UPU7 963 aa21.85■■□□□ 1.09
GPAA1-216ENST00000531593 DALRD3Q5D0E6 543 aaKnown RBP21.84■■□□□ 1.09
GPAA1-216ENST00000531593 TEX13AQ9BXU3 409 aaPredicted RBP21.84■■□□□ 1.09
GPAA1-216ENST00000531593 A0A087WZG4 1122 aa21.83■■□□□ 1.09
GPAA1-216ENST00000531593 USP16Q9Y5T5 823 aa21.83■■□□□ 1.09
GPAA1-216ENST00000531593 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
GPAA1-216ENST00000531593 SIPA1L3O60292 1781 aaPredicted RBP21.82■■□□□ 1.08
GPAA1-216ENST00000531593 CCDC24Q8N4L8 307 aa21.81■■□□□ 1.08
GPAA1-216ENST00000531593 MIS18AQ9NYP9 233 aa21.81■■□□□ 1.08
GPAA1-216ENST00000531593 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
GPAA1-216ENST00000531593 CARMIL3Q8ND23 1372 aa21.79■■□□□ 1.08
GPAA1-216ENST00000531593 NEFMP07197 916 aa21.79■■□□□ 1.08
GPAA1-216ENST00000531593 IL6STP40189 918 aaPredicted RBP21.79■■□□□ 1.08
GPAA1-216ENST00000531593 C9orf131Q5VYM1 1079 aa21.78■■□□□ 1.08
GPAA1-216ENST00000531593 C2CD5Q86YS7 1000 aa21.77■■□□□ 1.08
GPAA1-216ENST00000531593 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
GPAA1-216ENST00000531593 CAMTA2O94983 1202 aa21.76■■□□□ 1.07
GPAA1-216ENST00000531593 SNRPA1P09661 255 aaKnown RBP21.76■■□□□ 1.07
GPAA1-216ENST00000531593 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
GPAA1-216ENST00000531593 DZIP3Q86Y13 1208 aaKnown RBP21.76■■□□□ 1.07
GPAA1-216ENST00000531593 THUMPD2Q9BTF0 503 aaKnown RBP21.76■■□□□ 1.07
GPAA1-216ENST00000531593 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
GPAA1-216ENST00000531593 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
GPAA1-216ENST00000531593 BRCA1P38398 1863 aaKnown RBP21.75■■□□□ 1.07
GPAA1-216ENST00000531593 AFDNP55196 1824 aaKnown RBP21.74■■□□□ 1.07
GPAA1-216ENST00000531593 RASSF7Q02833 373 aa21.74■■□□□ 1.07
GPAA1-216ENST00000531593 RNF181Q9P0P0 153 aa21.74■■□□□ 1.07
GPAA1-216ENST00000531593 KIF3CO14782 793 aa21.73■■□□□ 1.07
GPAA1-216ENST00000531593 NPHP1O15259 732 aa21.73■■□□□ 1.07
GPAA1-216ENST00000531593 H0YIN7 160 aa21.72■■□□□ 1.07
GPAA1-216ENST00000531593 NFE2L2Q16236 605 aa21.72■■□□□ 1.07
GPAA1-216ENST00000531593 PRR5LQ6MZQ0 368 aa21.72■■□□□ 1.07
GPAA1-216ENST00000531593 ZNF219Q9P2Y4 722 aaPredicted RBP21.72■■□□□ 1.07
GPAA1-216ENST00000531593 MAPK8IP3Q9UPT6 1336 aa21.72■■□□□ 1.07
GPAA1-216ENST00000531593 NBPF26B4DH59 902 aa21.71■■□□□ 1.07
GPAA1-216ENST00000531593 NBPF10Q6P3W6 841 aaKnown RBP21.71■■□□□ 1.07
GPAA1-216ENST00000531593 NBPF15Q8N660 670 aa21.71■■□□□ 1.07
GPAA1-216ENST00000531593 TTLL6Q8N841 843 aa21.71■■□□□ 1.07
GPAA1-216ENST00000531593 ZNF622Q969S3 477 aaKnown RBP eCLIP21.71■■□□□ 1.07
GPAA1-216ENST00000531593 SETDB2Q96T68 719 aa21.71■■□□□ 1.07
GPAA1-216ENST00000531593 NMRK2Q9NPI5 230 aa21.71■■□□□ 1.07
GPAA1-216ENST00000531593 NRXN2Q9P2S2 1712 aa21.71■■□□□ 1.07
GPAA1-216ENST00000531593 SCN7AQ01118 1682 aa21.7■■□□□ 1.06
GPAA1-216ENST00000531593 RALBP1Q15311 655 aa21.69■■□□□ 1.06
GPAA1-216ENST00000531593 NGEFQ8N5V2 710 aa21.69■■□□□ 1.06
GPAA1-216ENST00000531593 CNBD1Q8NA66 436 aa21.69■■□□□ 1.06
GPAA1-216ENST00000531593 ARFGEF1Q9Y6D6 1849 aa21.69■■□□□ 1.06
GPAA1-216ENST00000531593 FAM177BA6PVY3 158 aa21.67■■□□□ 1.06
GPAA1-216ENST00000531593 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
GPAA1-216ENST00000531593 BRIP1Q9BX63 1249 aa21.67■■□□□ 1.06
GPAA1-216ENST00000531593 PNNQ9H307 717 aaKnown RBP21.67■■□□□ 1.06
GPAA1-216ENST00000531593 PDE6BP35913 854 aa21.66■■□□□ 1.06
GPAA1-216ENST00000531593 ST5P78524 1137 aa21.66■■□□□ 1.06
GPAA1-216ENST00000531593 PRELPP51888 382 aa21.65■■□□□ 1.06
GPAA1-216ENST00000531593 EIF4A1P60842 406 aaKnown RBP21.65■■□□□ 1.06
GPAA1-216ENST00000531593 NBPF5PQ86XG9 351 aaPredicted RBP21.65■■□□□ 1.06
GPAA1-216ENST00000531593 C21orf2O43822 256 aa21.64■■□□□ 1.05
GPAA1-216ENST00000531593 RIPK4P57078 832 aa21.64■■□□□ 1.05
GPAA1-216ENST00000531593 CCDC146Q8IYE0 955 aa21.64■■□□□ 1.05
GPAA1-216ENST00000531593 ZNF652Q9Y2D9 606 aa21.64■■□□□ 1.05
GPAA1-216ENST00000531593 RRP7AQ9Y3A4 280 aaKnown RBP21.64■■□□□ 1.05
GPAA1-216ENST00000531593 ZNF316A6NFI3 1004 aaPredicted RBP21.63■■□□□ 1.05
GPAA1-216ENST00000531593 HSPA6P17066 643 aa21.63■■□□□ 1.05
GPAA1-216ENST00000531593 HLFQ16534 295 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms