RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
NXF1-210ENST00000531579 TUBGCP6Q96RT7 1819 aa19.56■□□□□ 0.72
NXF1-210ENST00000531579 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
NXF1-210ENST00000531579 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
NXF1-210ENST00000531579 A0A087WZG4 1122 aa19.55■□□□□ 0.72
NXF1-210ENST00000531579 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
NXF1-210ENST00000531579 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
NXF1-210ENST00000531579 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
NXF1-210ENST00000531579 SOS1Q07889 1333 aaPredicted RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 TJP1Q07157 1748 aa19.54■□□□□ 0.72
NXF1-210ENST00000531579 ZPR1O75312 459 aa19.54■□□□□ 0.72
NXF1-210ENST00000531579 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 EIF4A1P60842 406 aaKnown RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 CALD1Q05682 793 aaKnown RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
NXF1-210ENST00000531579 FHDC1Q9C0D6 1143 aaPredicted RBP19.54■□□□□ 0.72
NXF1-210ENST00000531579 TSPYL4Q9UJ04 414 aa19.54■□□□□ 0.72
NXF1-210ENST00000531579 EIF5P55010 431 aaKnown RBP19.53■□□□□ 0.72
NXF1-210ENST00000531579 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
NXF1-210ENST00000531579 CHL1O00533 1208 aa19.52■□□□□ 0.72
NXF1-210ENST00000531579 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
NXF1-210ENST00000531579 GYS1P13807 737 aa19.52■□□□□ 0.72
NXF1-210ENST00000531579 NARFQ9UHQ1 456 aa19.52■□□□□ 0.72
NXF1-210ENST00000531579 MYH14Q7Z406 1995 aaKnown RBP19.52■□□□□ 0.71
NXF1-210ENST00000531579 USP42Q9H9J4 1324 aaKnown RBP19.51■□□□□ 0.71
NXF1-210ENST00000531579 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
NXF1-210ENST00000531579 DCAF8L1A6NGE4 600 aa19.51■□□□□ 0.71
NXF1-210ENST00000531579 A1BGP04217 495 aa19.51■□□□□ 0.71
NXF1-210ENST00000531579 CFAP44Q96MT7 982 aa19.5■□□□□ 0.71
NXF1-210ENST00000531579 COL15A1P39059 1388 aa19.49■□□□□ 0.71
NXF1-210ENST00000531579 PRAMEF22A3QJZ6 481 aa19.49■□□□□ 0.71
NXF1-210ENST00000531579 MMP10P09238 476 aa19.49■□□□□ 0.71
NXF1-210ENST00000531579 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
NXF1-210ENST00000531579 CD2APQ9Y5K6 639 aa19.49■□□□□ 0.71
NXF1-210ENST00000531579 USPL1Q5W0Q7 1092 aa19.48■□□□□ 0.71
NXF1-210ENST00000531579 SRP68Q9UHB9 627 aaKnown RBP19.48■□□□□ 0.71
NXF1-210ENST00000531579 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
NXF1-210ENST00000531579 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
NXF1-210ENST00000531579 GNAI1P63096 354 aa19.46■□□□□ 0.71
NXF1-210ENST00000531579 FKBP8Q14318 412 aa19.46■□□□□ 0.71
NXF1-210ENST00000531579 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
NXF1-210ENST00000531579 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
NXF1-210ENST00000531579 TM4SF1P30408 202 aa19.45■□□□□ 0.7
NXF1-210ENST00000531579 KLHL34Q8N239 644 aa19.45■□□□□ 0.7
NXF1-210ENST00000531579 IFT57Q9NWB7 429 aa19.45■□□□□ 0.7
NXF1-210ENST00000531579 ZNF330Q9Y3S2 320 aaPredicted RBP19.45■□□□□ 0.7
NXF1-210ENST00000531579 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
NXF1-210ENST00000531579 RGL2O15211 777 aa19.44■□□□□ 0.7
NXF1-210ENST00000531579 ZNF853P0CG23 659 aa19.44■□□□□ 0.7
NXF1-210ENST00000531579 TBC1D2BQ9UPU7 963 aa19.44■□□□□ 0.7
NXF1-210ENST00000531579 ERBB4Q15303 1308 aa19.44■□□□□ 0.7
NXF1-210ENST00000531579 KDM3BQ7LBC6 1761 aa19.43■□□□□ 0.7
NXF1-210ENST00000531579 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
NXF1-210ENST00000531579 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
NXF1-210ENST00000531579 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
NXF1-210ENST00000531579 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
NXF1-210ENST00000531579 HOXB7P09629 217 aa19.42■□□□□ 0.7
NXF1-210ENST00000531579 CLEC4GQ6UXB4 293 aa19.42■□□□□ 0.7
NXF1-210ENST00000531579 WWC1Q8IX03 1113 aa19.42■□□□□ 0.7
NXF1-210ENST00000531579 BCL2L12Q9HB09 334 aa19.42■□□□□ 0.7
NXF1-210ENST00000531579 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
NXF1-210ENST00000531579 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
NXF1-210ENST00000531579 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
NXF1-210ENST00000531579 TGFB2P61812 414 aa19.4■□□□□ 0.7
NXF1-210ENST00000531579 NFIXQ14938 502 aa19.4■□□□□ 0.7
NXF1-210ENST00000531579 DIEXFQ68CQ4 756 aaKnown RBP19.4■□□□□ 0.7
NXF1-210ENST00000531579 ZNF652Q9Y2D9 606 aa19.4■□□□□ 0.7
NXF1-210ENST00000531579 POLRMTO00411 1230 aaKnown RBP19.39■□□□□ 0.69
NXF1-210ENST00000531579 CAMTA2O94983 1202 aa19.39■□□□□ 0.69
NXF1-210ENST00000531579 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
NXF1-210ENST00000531579 WDR63Q8IWG1 891 aa19.39■□□□□ 0.69
NXF1-210ENST00000531579 IL16Q14005 1332 aa19.39■□□□□ 0.69
NXF1-210ENST00000531579 C4AP0C0L4 1744 aa19.39■□□□□ 0.69
NXF1-210ENST00000531579 ERVV-1B6SEH8 477 aa19.37■□□□□ 0.69
NXF1-210ENST00000531579 DDR1Q08345 913 aa19.37■□□□□ 0.69
NXF1-210ENST00000531579 NLGN2Q8NFZ4 835 aa19.37■□□□□ 0.69
NXF1-210ENST00000531579 SETDB2Q96T68 719 aa19.37■□□□□ 0.69
NXF1-210ENST00000531579 SERPINB2P05120 415 aa19.36■□□□□ 0.69
NXF1-210ENST00000531579 MYL6BP14649 208 aa19.36■□□□□ 0.69
NXF1-210ENST00000531579 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
NXF1-210ENST00000531579 PDIA6Q15084 440 aa19.35■□□□□ 0.69
NXF1-210ENST00000531579 GPR162Q16538 588 aa19.35■□□□□ 0.69
NXF1-210ENST00000531579 TBC1D9BQ66K14 1250 aa19.35■□□□□ 0.69
NXF1-210ENST00000531579 KIF6Q6ZMV9 814 aa19.35■□□□□ 0.69
NXF1-210ENST00000531579 DDX21Q9NR30 783 aaKnown RBP eCLIP19.35■□□□□ 0.69
NXF1-210ENST00000531579 KRT24Q2M2I5 525 aa19.34■□□□□ 0.69
NXF1-210ENST00000531579 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
NXF1-210ENST00000531579 BICDL1Q6ZP65 573 aa19.34■□□□□ 0.69
NXF1-210ENST00000531579 DBF4Q9UBU7 674 aaPredicted RBP19.34■□□□□ 0.69
NXF1-210ENST00000531579 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
NXF1-210ENST00000531579 LAMB4A4D0S4 1761 aa19.33■□□□□ 0.68
NXF1-210ENST00000531579 MAP3K15Q6ZN16 1313 aa19.32■□□□□ 0.68
NXF1-210ENST00000531579 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
NXF1-210ENST00000531579 GRIN3BO60391 1043 aa19.32■□□□□ 0.68
NXF1-210ENST00000531579 CARMIL3Q8ND23 1372 aa19.32■□□□□ 0.68
NXF1-210ENST00000531579 LRP10Q7Z4F1 713 aa19.31■□□□□ 0.68
NXF1-210ENST00000531579 NECTIN2Q92692 538 aa19.31■□□□□ 0.68
NXF1-210ENST00000531579 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms