RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PPM1EQ8WY54 764 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 CEP152O94986 1710 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 SPHKAPQ2M3C7 1700 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 CCDC196A0A1B0GTZ2 297 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 ACTN2P35609 894 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 EFCAB2Q5VUJ9 269 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 TMX3Q96JJ7 454 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-219ENST00000531050 IQGAP1P46940 1657 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 TRPM2O94759 1503 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 PTPN14Q15678 1187 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 NEUROD2Q15784 382 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 MAP9Q49MG5 647 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 EXOC4Q96A65 974 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 IQSEC2Q5JU85 1478 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 REREQ9P2R6 1566 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 SPAG9O60271 1321 aaKnown RBP9.22□□□□□ -0.93
PTPRK-219ENST00000531050 ABCA9Q8IUA7 1624 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 CORO7P57737 925 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 CUL4AQ13619 759 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 PPP2R5AQ15172 486 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 FOXR1Q6PIV2 292 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 AK7Q96M32 723 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 L2HGDHQ9H9P8 463 aa9.22□□□□□ -0.93
PTPRK-219ENST00000531050 INO80Q9ULG1 1556 aaPredicted RBP9.21□□□□□ -0.93
PTPRK-219ENST00000531050 SASH3O75995 380 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 TMCO3Q6UWJ1 677 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 ATF7IPQ6VMQ6 1270 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 RPAINQ86UA6 219 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 RPAP1Q9BWH6 1393 aaPredicted RBP9.21□□□□□ -0.94
PTPRK-219ENST00000531050 CLTCL1P53675 1640 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 TET3O43151 1660 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 IVLP07476 585 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 LMAN1P49257 510 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 ZNF75DP51815 510 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC144BQ3MJ40 725 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 ARHGAP29Q52LW3 1261 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 PLA2G4DQ86XP0 818 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 BORCS6Q96GS4 357 aa9.21□□□□□ -0.94
PTPRK-219ENST00000531050 RBM28Q9NW13 759 aaKnown RBP9.21□□□□□ -0.94
PTPRK-219ENST00000531050 ATP8B1O43520 1251 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 SEC31AO94979 1220 aaKnown RBP9.2□□□□□ -0.94
PTPRK-219ENST00000531050 TRDNQ13061 729 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 BIRC2Q13490 618 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 SMC1AQ14683 1233 aaKnown RBP9.2□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC93Q567U6 631 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 NBPF10Q6P3W6 841 aaKnown RBP9.2□□□□□ -0.94
PTPRK-219ENST00000531050 JMYQ8N9B5 988 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 INHBEP58166 350 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 UBE2HP62256 183 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 DRC7Q8IY82 874 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 FAM200AQ8TCP9 573 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 CALR3Q96L12 384 aaKnown RBP9.2□□□□□ -0.94
PTPRK-219ENST00000531050 ADAM21Q9UKJ8 722 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 CNPY2Q9Y2B0 182 aa9.2□□□□□ -0.94
PTPRK-219ENST00000531050 PPIP5K1Q6PFW1 1433 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 ATP7AQ04656 1500 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 RPS6KA5O75582 802 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-219ENST00000531050 TCP11L2Q8N4U5 519 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 GCC1Q96CN9 775 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 ORC3Q9UBD5 711 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-219ENST00000531050 VWDEQ8N2E2 1590 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 KIF2AO00139 706 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-219ENST00000531050 NBPF9Q3BBW0 867 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 LUZP1Q86V48 1076 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 SSH1Q8WYL5 1049 aa9.19□□□□□ -0.94
PTPRK-219ENST00000531050 ELP1O95163 1332 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 PTPRTO14522 1441 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 KLHL33A6NCF5 533 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 KIF3CO14782 793 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 SCP2P22307 547 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 NBPF11Q86T75 865 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 ZNF428Q96B54 188 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 RUNDC1Q96C34 613 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 INTS4Q96HW7 963 aaKnown RBP9.18□□□□□ -0.94
PTPRK-219ENST00000531050 SRCIN1Q9C0H9 1055 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 PDRG1Q9NUG6 133 aa9.18□□□□□ -0.94
PTPRK-219ENST00000531050 NOB1Q9ULX3 412 aaKnown RBP9.18□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC9Q9Y3X0 531 aaKnown RBP9.18□□□□□ -0.94
PTPRK-219ENST00000531050 ANKRD65E5RJM6 399 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 CASTP20810 708 aaKnown RBP9.17□□□□□ -0.94
PTPRK-219ENST00000531050 ARID5BQ14865 1188 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 LRRC8AQ8IWT6 810 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 CCAR2Q8N163 923 aaKnown RBP9.17□□□□□ -0.94
PTPRK-219ENST00000531050 TBC1D22AQ8WUA7 517 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-219ENST00000531050 WDR33Q9C0J8 1336 aaKnown RBP9.17□□□□□ -0.94
PTPRK-219ENST00000531050 NOS1P29475 1434 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 CT47B1P0C2W7 299 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-219ENST00000531050 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
PTPRK-219ENST00000531050 LEKR1Q6ZMV7 388 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms